RNA–Protein interactions for RNA: ENSMUST00000055425.14

Phtf1-201, Transcript of Putative homeodomain transcription factor 1, mousemouse

TSL 1 (best) BASIC

Gene Phtf1, Length 3,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1-201ENSMUST00000055425 Zkscan1Q8BGS3 561 aaKnown RBP20.55■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Rbm10Q99KG3 930 aaKnown RBP20.55■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Stk31Q99MW1 1018 aa20.55■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Hoxb7P09024 217 aa20.55■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Rsph4aQ8BYM7 716 aa20.54■□□□□ 0.88
Phtf1-201ENSMUST00000055425 PtpruB1AUH1 1446 aa20.53■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Eif4a2P10630 407 aa20.53■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Clcn1Q64347 994 aa20.53■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Elp1Q7TT37 1333 aaKnown RBP20.53■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Prkar2bP31324 416 aa20.52■□□□□ 0.88
Phtf1-201ENSMUST00000055425 MpripP97434 1024 aa20.52■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Phf23Q8BSN5 401 aa20.52■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Kif20bQ80WE4 1774 aaKnown RBP20.52■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Pdia4P08003 638 aaKnown RBP20.52■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Chmp4cQ9D7F7 232 aa20.52■□□□□ 0.88
Phtf1-201ENSMUST00000055425 Cyp27a1Q9DBG1 533 aa20.52■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Erbb4Q61527 1308 aa20.51■□□□□ 0.87
Phtf1-201ENSMUST00000055425 IbspQ61711 324 aa20.51■□□□□ 0.87
Phtf1-201ENSMUST00000055425 4930407I10RikD3Z5T8 1512 aa20.51■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Gm9992B2RWK3 458 aa20.51■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Unc93aQ710D3 458 aa20.51■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Atg4a-psA0A0G2JFS9 396 aa20.5■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Pibf1E9Q6K3 756 aa20.5■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Atg4aQ8C9S8 396 aa20.5■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Gdpd2Q9ESM6 539 aa20.5■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Chd4Q6PDQ2 1915 aaKnown RBP20.49■□□□□ 0.87
Phtf1-201ENSMUST00000055425 CalcaP70160 136 aa20.49■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Zc3h13E9Q784 1729 aaKnown RBP20.49■□□□□ 0.87
Phtf1-201ENSMUST00000055425 CatipB9EKE5 520 aa20.49■□□□□ 0.87
Phtf1-201ENSMUST00000055425 4931400O07RikQ9D4M5 137 aa20.49■□□□□ 0.87
Phtf1-201ENSMUST00000055425 ImpactO55091 318 aa20.48■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Cyp46a1Q9WVK8 500 aa20.48■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Tpm2P58774 284 aa20.48■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Zdhhc9P59268 364 aa20.48■□□□□ 0.87
Phtf1-201ENSMUST00000055425 VgfQ0VGU4 617 aa20.48■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Ercc6l2Q9JIM3 1537 aa20.48■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Q9D2X8 372 aa20.47■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Dip2aQ8BWT5 1523 aa20.47■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Gemin5Q8BX17 1502 aaKnown RBP20.47■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Ripk4Q9ERK0 786 aa20.47■□□□□ 0.87
Phtf1-201ENSMUST00000055425 NpatQ8BMA5 1420 aa20.46■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Adgrb1Q3UHD1 1582 aa20.46■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Mdc1Q5PSV9 1707 aa20.46■□□□□ 0.87
Phtf1-201ENSMUST00000055425 Syce3B5KM66 88 aa20.45■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Cc2d1aQ8K1A6 943 aa20.45■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Psme1P97371 249 aa20.45■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Pank2Q3U4S0 443 aa20.45■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Rbm27Q5SFM8 1060 aaKnown RBP20.45■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Erc2Q6PH08 957 aa20.45■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Rnf214Q8BFU3 668 aaKnown RBP20.45■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Gadd45bP22339 160 aa20.44■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Ggnbp2Q5SV77 696 aa20.44■□□□□ 0.86
Phtf1-201ENSMUST00000055425 TmpoQ61033 693 aaKnown RBP20.44■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Mrps27Q8BK72 415 aaKnown RBP20.44■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Zkscan16A2ALW2 728 aa20.43■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Ush1cQ9ES64 910 aa20.43■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Tex2Q6ZPJ0 1128 aaKnown RBP20.43■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Bcar3Q9QZK2 820 aa20.42■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Rnf123Q5XPI3 1314 aa20.42■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Fez1Q8K0X8 392 aa20.41■□□□□ 0.86
Phtf1-201ENSMUST00000055425 PtmsQ9D0J8 101 aaKnown RBP20.41■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Ap3b2Q9JME5 1082 aa20.41■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Cdk12Q14AX6 1484 aaKnown RBP20.41■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Prim1P20664 417 aa20.4■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Irf5P56477 497 aa20.4■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Txndc2Q6P902 515 aa20.4■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Sv2bQ8BG39 683 aa20.4■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Tet3Q8BG87 1668 aa20.4■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Mknk2Q8CDB0 459 aa20.4■□□□□ 0.86
Phtf1-201ENSMUST00000055425 ScaperF8VQ70 1398 aaKnown RBP20.4■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Prune1Q8BIW1 454 aa20.4■□□□□ 0.86
Phtf1-201ENSMUST00000055425 Pik3c2bE9QAN8 1632 aa20.39■□□□□ 0.86
Phtf1-201ENSMUST00000055425 IghaA0A0A6YXW6 389 aa20.39■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Med1Q925J9 1575 aa20.39■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Cps1Q8C196 1500 aa20.38■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Astn2Q80Z10 1352 aa20.38■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Vwa3bJ9JI28 736 aa20.38■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Zkscan2G3X952 960 aa20.37■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Becn1O88597 448 aa20.37■□□□□ 0.85
Phtf1-201ENSMUST00000055425 RestQ8VIG1 1082 aa20.37■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Tnrc6bQ8BKI2 1810 aaKnown RBP20.37■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Phactr2B1AVP0 632 aa20.37■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Cpa2Q504N0 417 aa20.37■□□□□ 0.85
Phtf1-201ENSMUST00000055425 NexnQ7TPW1 607 aa20.37■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Zscan25B2RX31 543 aa20.36■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Gzf1Q4VBD9 706 aa20.36■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Gnai2P08752 355 aaKnown RBP20.36■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Rcan3Q9JKK0 239 aa20.36■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Pdcl2Q78Y63 240 aa20.35■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Nphp1Q9QY53 687 aa20.35■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Snap23O09044 210 aa20.35■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Srgap3Q812A2 1099 aa20.35■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Gse1Q3U3C9 1213 aa20.35■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Rtf1A2AQ19 715 aaKnown RBP20.34■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Gripap1Q8VD04 806 aa20.34■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Fam83gQ5SWY7 812 aa20.34■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Ppp1r42Q8R1Z4 357 aa20.34■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Ptpdc1Q6NZK8 747 aa20.33■□□□□ 0.85
Phtf1-201ENSMUST00000055425 HnrnpmQ9D0E1 729 aaKnown RBP20.33■□□□□ 0.85
Phtf1-201ENSMUST00000055425 Gm45015A0A140LII9 184 aa20.33■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms