RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 Synj2Q9D2G5 1434 aa13.23□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Dnajc5gQ8C632 165 aa13.22□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Stk3Q9JI10 497 aa13.22□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Phactr2B1AVP0 632 aa13.22□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Tbc1d9Q3UYK3 1264 aa13.22□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Idi2Q8BFZ6 227 aa13.22□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Rab11fip3Q8CHD8 1047 aa13.22□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Acsbg1Q99PU5 721 aa13.22□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Fam50bQ9WTJ8 334 aa13.22□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Hmox1P14901 289 aa13.21□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Trim27Q62158 513 aa13.21□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Sh3bp5Q9Z131 463 aa13.21□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Exoc6bA6H5Z3 810 aa13.21□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Tfip11Q9ERA6 838 aaKnown RBP13.21□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Trim44Q9QXA7 346 aa13.21□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Anapc15-psA0A140T8L6 141 aa13.2□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Casq1O09165 405 aa13.2□□□□□ -0.3
Col9a1-201ENSMUST00000054588 CalcaP70160 136 aa13.2□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Aldh8a1Q8BH00 487 aa13.2□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Rsph6aQ8CDR2 708 aa13.2□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Kdm4cQ8VCD7 1054 aa13.2□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Mphosph10Q810V0 681 aaKnown RBP13.2□□□□□ -0.3
Col9a1-201ENSMUST00000054588 AppP12023 770 aa13.19□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Aldh1l2Q8K009 923 aa13.19□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Gtf2a1Q99PM3 378 aa13.19□□□□□ -0.3
Col9a1-201ENSMUST00000054588 SlkO54988 1233 aa13.19□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Ccdc155Q80VJ8 648 aa13.19□□□□□ -0.3
Col9a1-201ENSMUST00000054588 PtmsQ9D0J8 101 aaKnown RBP13.19□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Abca14E9Q8F8 1683 aa13.19□□□□□ -0.3
Col9a1-201ENSMUST00000054588 NktrP30415 1453 aa13.19□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Cwc27Q3TKY6 469 aa13.18□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Bcl11bQ99PV8 884 aa13.18□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Aifm3Q3TY86 605 aa13.18□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Amotl2Q8K371 772 aa13.18□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Chmp7Q8R1T1 451 aa13.18□□□□□ -0.3
Col9a1-201ENSMUST00000054588 CenppQ9CZ92 286 aa13.18□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Uhrf1bp1lA2RSJ4 1457 aa13.18□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Nckap5lQ6GQX2 1323 aa13.17□□□□□ -0.3
Col9a1-201ENSMUST00000054588 CatipB9EKE5 520 aa13.17□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Neurod6P48986 337 aa13.17□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Pcmtd1P59913 357 aa13.17□□□□□ -0.3
Col9a1-201ENSMUST00000054588 BcanQ61361 883 aa13.17□□□□□ -0.3
Col9a1-201ENSMUST00000054588 MecomP14404 1042 aa13.17□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Jarid2Q62315 1234 aa13.17□□□□□ -0.3
Col9a1-201ENSMUST00000054588 HypkQ9CR41 129 aa13.17□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Eif4a2P10630 407 aa13.16□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Atf3Q60765 181 aa13.16□□□□□ -0.3
Col9a1-201ENSMUST00000054588 MarsQ68FL6 902 aaKnown RBP13.16□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Gm21698A0A087WQP8 267 aa13.16□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Gm21671G3UY31 267 aa13.16□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Ddx17Q501J6 650 aaKnown RBP13.16□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Ddx54Q8K4L0 874 aaKnown RBP13.16□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Pes1Q9EQ61 584 aaKnown RBP13.16□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Fam83gQ5SWY7 812 aa13.15□□□□□ -0.3
Col9a1-201ENSMUST00000054588 Ppip5k2Q6ZQB6 1129 aa13.15□□□□□ -0.3
Col9a1-201ENSMUST00000054588 CgnP59242 1191 aa13.14□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Nsfl1cQ9CZ44 370 aaKnown RBP13.14□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Cul9Q80TT8 1865 aa13.14□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Prkar2bP31324 416 aa13.14□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Cnnm1Q0GA42 951 aa13.14□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Srgap3Q812A2 1099 aa13.14□□□□□ -0.31
Col9a1-201ENSMUST00000054588 PtpruB1AUH1 1446 aa13.13□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Idi1P58044 227 aa13.13□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Babam1Q3UI43 333 aa13.13□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Zkscan1Q8BGS3 561 aaKnown RBP13.13□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Rrp9Q91WM3 475 aaKnown RBP13.13□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Spef2Q8C9J3 1734 aa13.12□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Tm6sf1P58749 370 aa13.12□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Kif1aP33173 1695 aa13.12□□□□□ -0.31
Col9a1-201ENSMUST00000054588 FosbP13346 338 aa13.12□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Fam13aQ8BGI4 693 aa13.12□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Chpf2Q3UU43 768 aa13.11□□□□□ -0.31
Col9a1-201ENSMUST00000054588 CrebrfQ8CDG5 640 aaKnown RBP13.11□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Astn2Q80Z10 1352 aa13.11□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Rrp12Q6P5B0 1295 aaKnown RBP13.11□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Dip2aQ8BWT5 1523 aa13.11□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Kif13aQ9EQW7 1749 aa13.11□□□□□ -0.31
Col9a1-201ENSMUST00000054588 MccE9PWI3 1003 aa13.11□□□□□ -0.31
Col9a1-201ENSMUST00000054588 FanclQ9CR14 375 aa13.11□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Cyp46a1Q9WVK8 500 aa13.11□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Nwd1A6H603 1563 aa13.1□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Il4rP16382 810 aa13.1□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Ddrgk1Q80WW9 315 aa13.1□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Erich6bQ9D4S6 220 aa13.1□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Elp1Q7TT37 1333 aaKnown RBP13.1□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Nucb1Q02819 459 aaKnown RBP13.1□□□□□ -0.31
Col9a1-201ENSMUST00000054588 GphnQ8BUV3 769 aaKnown RBP13.1□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Tceal9Q9DD24 104 aa13.1□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Kif24Q6NWW5 1356 aa13.1□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Zc3h13E9Q784 1729 aaKnown RBP13.1□□□□□ -0.31
Col9a1-201ENSMUST00000054588 PplQ9R269 1755 aa13.1□□□□□ -0.31
Col9a1-201ENSMUST00000054588 NpatQ8BMA5 1420 aa13.1□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Ddit3P35639 168 aa13.09□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Gemin5Q8BX17 1502 aaKnown RBP13.09□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Bag4Q8CI61 457 aa13.09□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Itsn1Q9Z0R4 1714 aa13.09□□□□□ -0.31
Col9a1-201ENSMUST00000054588 ScaperF8VQ70 1398 aaKnown RBP13.09□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Lmod3E9QA62 571 aa13.09□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Chl1P70232 1209 aa13.09□□□□□ -0.31
Col9a1-201ENSMUST00000054588 Ppp6r3Q922D4 844 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms