RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 NischQ80TM9 1593 aa19.93■□□□□ 0.78
Col9a1-201ENSMUST00000054588 Rhox8Q6VSS7 320 aa19.76■□□□□ 0.75
Col9a1-201ENSMUST00000054588 Gm35339A0A140LHH9 1649 aa19.4■□□□□ 0.7
Col9a1-201ENSMUST00000054588 Abcc9P70170 1546 aa19.34■□□□□ 0.69
Col9a1-201ENSMUST00000054588 Abcc8B2RUS7 1588 aa18.82■□□□□ 0.6
Col9a1-201ENSMUST00000054588 Rtl1Q7M732 1744 aa18.69■□□□□ 0.58
Col9a1-201ENSMUST00000054588 Ccdc180J3QNE4 1664 aa18.38■□□□□ 0.53
Col9a1-201ENSMUST00000054588 Ccdc136Q3TVA9 1136 aa18.13■□□□□ 0.49
Col9a1-201ENSMUST00000054588 Ehmt2Q9Z148 1263 aaKnown RBP18.08■□□□□ 0.48
Col9a1-201ENSMUST00000054588 Rpgrip1Q9EPQ2 1331 aa17.91■□□□□ 0.46
Col9a1-201ENSMUST00000054588 Zcchc6Q5BLK4 1491 aaKnown RBP17.77■□□□□ 0.44
Col9a1-201ENSMUST00000054588 Dcaf1Q80TR8 1506 aa17.68■□□□□ 0.42
Col9a1-201ENSMUST00000054588 HrcG5E8J6 738 aa17.53■□□□□ 0.4
Col9a1-201ENSMUST00000054588 Rb1cc1Q9ESK9 1588 aa17.48■□□□□ 0.39
Col9a1-201ENSMUST00000054588 Cngb1E1AZ71 1325 aa17.44■□□□□ 0.38
Col9a1-201ENSMUST00000054588 Gab3Q8BSM5 595 aa17.41■□□□□ 0.38
Col9a1-201ENSMUST00000054588 Acin1Q9JIX8 1338 aaKnown RBP17.39■□□□□ 0.38
Col9a1-201ENSMUST00000054588 ScribQ80U72 1612 aa17.36■□□□□ 0.37
Col9a1-201ENSMUST00000054588 Trim41Q5NCC3 630 aa17.32■□□□□ 0.36
Col9a1-201ENSMUST00000054588 Baz1aO88379 1555 aa17.3■□□□□ 0.36
Col9a1-201ENSMUST00000054588 Esf1Q3V1V3 845 aaKnown RBP17.28■□□□□ 0.36
Col9a1-201ENSMUST00000054588 Kdm5dQ62240 1548 aa17.17■□□□□ 0.34
Col9a1-201ENSMUST00000054588 NacadQ5SWP3 1504 aa17.09■□□□□ 0.33
Col9a1-201ENSMUST00000054588 Crybg2B7ZCC2 1516 aa16.97■□□□□ 0.31
Col9a1-201ENSMUST00000054588 Cep164Q5DU05 1446 aa16.9■□□□□ 0.3
Col9a1-201ENSMUST00000054588 Myt1lP97500 1187 aa16.88■□□□□ 0.29
Col9a1-201ENSMUST00000054588 Smarca2Q6DIC0 1577 aa16.88■□□□□ 0.29
Col9a1-201ENSMUST00000054588 Zeb1Q64318 1117 aa16.76■□□□□ 0.27
Col9a1-201ENSMUST00000054588 Npm2Q80W85 207 aa16.71■□□□□ 0.27
Col9a1-201ENSMUST00000054588 Pcgf6Q99NA9 353 aa16.7■□□□□ 0.26
Col9a1-201ENSMUST00000054588 Sycp2Q9CUU3 1500 aa16.66■□□□□ 0.26
Col9a1-201ENSMUST00000054588 Brd4Q9ESU6 1400 aaKnown RBP16.64■□□□□ 0.25
Col9a1-201ENSMUST00000054588 Il27Q8K3I6 234 aa16.63■□□□□ 0.25
Col9a1-201ENSMUST00000054588 UbtfP25976 765 aaKnown RBP16.58■□□□□ 0.24
Col9a1-201ENSMUST00000054588 Rsf1E9PWW9 1441 aaKnown RBP16.51■□□□□ 0.23
Col9a1-201ENSMUST00000054588 Chic1Q8CBW7 227 aa16.49■□□□□ 0.23
Col9a1-201ENSMUST00000054588 Golga3P55937 1487 aa16.48■□□□□ 0.23
Col9a1-201ENSMUST00000054588 Wdr66E9Q743 1299 aa16.47■□□□□ 0.23
Col9a1-201ENSMUST00000054588 NefmP08553 848 aa16.42■□□□□ 0.22
Col9a1-201ENSMUST00000054588 Ppargc1bQ8VHJ7 1014 aa16.37■□□□□ 0.21
Col9a1-201ENSMUST00000054588 Cecr2E9Q2Z1 1453 aa16.37■□□□□ 0.21
Col9a1-201ENSMUST00000054588 Supt5hO55201 1082 aaKnown RBP16.36■□□□□ 0.21
Col9a1-201ENSMUST00000054588 Ccdc88bQ4QRL3 1481 aa16.35■□□□□ 0.21
Col9a1-201ENSMUST00000054588 Ap3b1Q9Z1T1 1105 aa16.35■□□□□ 0.21
Col9a1-201ENSMUST00000054588 Synj1Q8CHC4 1574 aa16.31■□□□□ 0.2
Col9a1-201ENSMUST00000054588 CftrP26361 1476 aa16.24■□□□□ 0.19
Col9a1-201ENSMUST00000054588 Ube2uB1AUC4 352 aa16.24■□□□□ 0.19
Col9a1-201ENSMUST00000054588 Mier1Q5UAK0 511 aa16.22■□□□□ 0.19
Col9a1-201ENSMUST00000054588 Las1lA2BE28 776 aaKnown RBP16.17■□□□□ 0.18
Col9a1-201ENSMUST00000054588 BicraF8VPZ9 1578 aa16.16■□□□□ 0.18
Col9a1-201ENSMUST00000054588 Cttnbp2B9EJA2 1648 aa16.15■□□□□ 0.18
Col9a1-201ENSMUST00000054588 Top2bQ64511 1612 aa16.14■□□□□ 0.17
Col9a1-201ENSMUST00000054588 Plekhg3Q4VAC9 1341 aa16.1■□□□□ 0.17
Col9a1-201ENSMUST00000054588 Smarca4Q3TKT4 1613 aaKnown RBP16.02■□□□□ 0.15
Col9a1-201ENSMUST00000054588 Fmn1Q05860 1466 aa16.02■□□□□ 0.15
Col9a1-201ENSMUST00000054588 Rapgef2Q8CHG7 1496 aa15.99■□□□□ 0.15
Col9a1-201ENSMUST00000054588 Neurod1Q60867 357 aa15.97■□□□□ 0.15
Col9a1-201ENSMUST00000054588 Cc2d2aQ8CFW7 1633 aa15.96■□□□□ 0.15
Col9a1-201ENSMUST00000054588 Fam50aQ9WV03 339 aaKnown RBP15.94■□□□□ 0.14
Col9a1-201ENSMUST00000054588 Lmod2Q3UHZ5 550 aa15.94■□□□□ 0.14
Col9a1-201ENSMUST00000054588 Sall2Q9QX96 1004 aa15.94■□□□□ 0.14
Col9a1-201ENSMUST00000054588 Top2aQ01320 1528 aaKnown RBP15.9■□□□□ 0.14
Col9a1-201ENSMUST00000054588 Cep162Q6ZQ06 1403 aa15.88■□□□□ 0.13
Col9a1-201ENSMUST00000054588 Eid3Q3V124 375 aa15.84■□□□□ 0.13
Col9a1-201ENSMUST00000054588 Npm1Q61937 292 aaKnown RBP15.78■□□□□ 0.12
Col9a1-201ENSMUST00000054588 ClspnQ80YR7 1315 aa15.77■□□□□ 0.11
Col9a1-201ENSMUST00000054588 Iqgap2Q3UQ44 1575 aa15.76■□□□□ 0.11
Col9a1-201ENSMUST00000054588 Clip1Q922J3 1391 aa15.76■□□□□ 0.11
Col9a1-201ENSMUST00000054588 Mapk8ip2Q9ERE9 830 aa15.76■□□□□ 0.11
Col9a1-201ENSMUST00000054588 Slc24a1Q91WD8 1130 aa15.74■□□□□ 0.11
Col9a1-201ENSMUST00000054588 Anks4bQ8K3X6 423 aa15.74■□□□□ 0.11
Col9a1-201ENSMUST00000054588 TonslQ6NZL6 1363 aa15.72■□□□□ 0.11
Col9a1-201ENSMUST00000054588 Atad2bE9Q166 1460 aaKnown RBP15.69■□□□□ 0.1
Col9a1-201ENSMUST00000054588 Cdk11bP24788 784 aaKnown RBP15.68■□□□□ 0.1
Col9a1-201ENSMUST00000054588 Ubl4bQ9CQ84 188 aa15.67■□□□□ 0.1
Col9a1-201ENSMUST00000054588 Aebp2Q9Z248 504 aaKnown RBP15.66■□□□□ 0.1
Col9a1-201ENSMUST00000054588 Nop58Q6DFW4 536 aaKnown RBP15.65■□□□□ 0.1
Col9a1-201ENSMUST00000054588 Pds5bQ4VA53 1446 aaKnown RBP15.61■□□□□ 0.09
Col9a1-201ENSMUST00000054588 Zbtb7cQ8VCZ7 619 aa15.61■□□□□ 0.09
Col9a1-201ENSMUST00000054588 Eif4g1Q6NZJ6 1600 aaKnown RBP15.59■□□□□ 0.09
Col9a1-201ENSMUST00000054588 NclP09405 707 aaKnown RBP15.57■□□□□ 0.08
Col9a1-201ENSMUST00000054588 Eea1Q8BL66 1411 aa15.57■□□□□ 0.08
Col9a1-201ENSMUST00000054588 TnnQ80Z71 1560 aa15.56■□□□□ 0.08
Col9a1-201ENSMUST00000054588 Ncapd3Q6ZQK0 1506 aa15.54■□□□□ 0.08
Col9a1-201ENSMUST00000054588 Kif15Q6P9L6 1387 aa15.52■□□□□ 0.08
Col9a1-201ENSMUST00000054588 Fkbp15Q6P9Q6 1216 aaKnown RBP15.52■□□□□ 0.08
Col9a1-201ENSMUST00000054588 Arhgap35Q91YM2 1499 aa15.51■□□□□ 0.07
Col9a1-201ENSMUST00000054588 NrkQ9R0G8 1455 aa15.48■□□□□ 0.07
Col9a1-201ENSMUST00000054588 Ifnlr1Q8CGK5 535 aa15.48■□□□□ 0.07
Col9a1-201ENSMUST00000054588 Ccdc18Q640L5 1455 aa15.47■□□□□ 0.07
Col9a1-201ENSMUST00000054588 Setd5Q5XJV7 1441 aa15.47■□□□□ 0.07
Col9a1-201ENSMUST00000054588 Csrnp3P59055 597 aa15.45■□□□□ 0.06
Col9a1-201ENSMUST00000054588 Chic2Q9D9G3 165 aa15.43■□□□□ 0.06
Col9a1-201ENSMUST00000054588 Map3k1P53349 1493 aa15.43■□□□□ 0.06
Col9a1-201ENSMUST00000054588 Lamc3Q9R0B6 1581 aa15.42■□□□□ 0.06
Col9a1-201ENSMUST00000054588 Shroom4Q1W617 1475 aa15.42■□□□□ 0.06
Col9a1-201ENSMUST00000054588 Arap1Q4LDD4 1452 aa15.42■□□□□ 0.06
Col9a1-201ENSMUST00000054588 Zbtb4Q5F293 982 aa15.41■□□□□ 0.06
Col9a1-201ENSMUST00000054588 PtprkP35822 1457 aa15.4■□□□□ 0.06
Col9a1-201ENSMUST00000054588 1700123L14RikQ3V2K7 440 aa15.4■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms