RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 PtprmP28828 1452 aa11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Sox12Q04890 314 aa11.31□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Erich6bQ9D4S6 220 aa11.31□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Nwd1A6H603 1563 aa11.31□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Ush1cQ9ES64 910 aa11.31□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Gm20521D3Z5F7 333 aa11.31□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Grpel1Q99LP6 217 aa11.31□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Tsen2Q6P7W5 460 aa11.3□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 BccipQ9CWI3 316 aa11.3□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 MvpQ9EQK5 861 aa11.3□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Nxf2Q4ZGD8 691 aa11.3□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Polr3glQ8R0C0 218 aa11.3□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Aldh1l1Q8R0Y6 902 aa11.3□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 PaskQ8CEE6 1383 aa11.3□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Zkscan16A2ALW2 728 aa11.3□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Aldh8a1Q8BH00 487 aa11.3□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Ccdc60Q8C4J0 545 aa11.3□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Kansl3A2RSY1 903 aaKnown RBP11.29□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Puf60Q3UEB3 564 aaKnown RBP11.29□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 CtifQ6PEE2 600 aaKnown RBP11.29□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 TimelessQ9R1X4 1197 aa11.29□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Anapc15-psA0A140T8L6 141 aa11.29□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Ppip5k2Q6ZQB6 1129 aa11.29□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Casq1O09165 405 aa11.29□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Prune1Q8BIW1 454 aa11.29□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Map7O88735 730 aa11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 CalcaP70160 136 aa11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Elp1Q7TT37 1333 aaKnown RBP11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Gm45015A0A140LII9 184 aa11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Gm18336A0A140LIU8 765 aa11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 NcapgE9PWG6 1004 aa11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Zkscan1Q8BGS3 561 aaKnown RBP11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Atp10dQ8K2X1 1416 aa11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 DekQ7TNV0 380 aaKnown RBP11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 1700010I14RikQ7TPG0 532 aa11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Naa30Q8CES0 364 aa11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Kif1aP33173 1695 aa11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Aifm3Q3TY86 605 aa11.28□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 U2af1Q9D883 239 aaKnown RBP11.27□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Exosc9Q9JHI7 438 aaKnown RBP11.27□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Chd2E9PZM4 1827 aaKnown RBP11.27□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Znf316Q6PGE4 1016 aa11.27□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Vsig10D3YX43 558 aa11.26□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Bms1Q6PGF5 1284 aaKnown RBP11.26□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Zfp804bA0A0G2JGH6 1343 aa11.26□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Atg4a-psA0A0G2JFS9 396 aa11.26□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Rnf214Q8BFU3 668 aaKnown RBP11.26□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Atg4aQ8C9S8 396 aa11.26□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Ap3b2Q9JME5 1082 aa11.26□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Trim28Q62318 834 aa11.26□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Serpina10Q8R121 448 aa11.26□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Elmsan1E9Q2I4 1089 aaKnown RBP11.25□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Capn2O08529 700 aa11.25□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Med1Q925J9 1575 aa11.25□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Mkrn3Q60764 544 aa11.25□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Nol11Q8BJW5 723 aaKnown RBP11.25□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Itsn1Q9Z0R4 1714 aa11.25□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Ccdc146E9Q9F7 977 aa11.25□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Tm6sf1P58749 370 aa11.25□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Fam43aQ8BUP8 424 aa11.25□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Cbx1P83917 185 aaKnown RBP11.25□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Ccdc171E9Q1U1 1324 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Cavin4A2AMM0 362 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Becn1O88597 448 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 RbsnQ80Y56 783 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Cetn4Q8K4K1 168 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Slc12a5Q91V14 1138 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 NalcnQ8BXR5 1738 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Prr29B1ARI9 187 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Stag3O70576 1240 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Prdm4Q80V63 803 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Uhrf1bp1lA2RSJ4 1457 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Arhgap23Q69ZH9 1483 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Bach1P97302 739 aa11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 G3bp1P97855 465 aaKnown RBP11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Nol8Q3UHX0 1147 aaKnown RBP11.24□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Zfp251Q6PCX8 632 aa11.23□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 GphnQ8BUV3 769 aaKnown RBP11.23□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Smarca5Q91ZW3 1051 aaKnown RBP11.23□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Casz1Q9CWL2 1761 aa11.23□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Ythdc2B2RR83 1445 aaKnown RBP11.23□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Adamts7Q68SA9 1657 aa11.23□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 U2af2P26369 475 aaKnown RBP11.23□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Zhx1P70121 873 aa11.23□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Nlrp3Q8R4B8 1033 aa11.23□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Brpf3B2KF05 1204 aaKnown RBP11.22□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 KnstrnQ9D9Z1 312 aaKnown RBP11.22□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Cavin1O54724 392 aa11.22□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Atf3Q60765 181 aa11.22□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Oxsr1Q6P9R2 527 aa11.22□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Zfp51Q3U4L8 781 aa11.21□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Fam13aQ8BGI4 693 aa11.21□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Cdc37l1Q9CZP7 335 aa11.21□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Mrps27Q8BK72 415 aaKnown RBP11.21□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 NinlQ6ZQ12 1394 aa11.21□□□□□ -0.61
Ccdc171-201ENSMUST00000053414 Fbxo2Q80UW2 297 aa11.21□□□□□ -0.62
Ccdc171-201ENSMUST00000053414 Fam13bQ8K2H3 851 aa11.21□□□□□ -0.62
Ccdc171-201ENSMUST00000053414 Klhdc4Q921I2 584 aa11.21□□□□□ -0.62
Ccdc171-201ENSMUST00000053414 Dlg5E9Q9R9 1921 aa11.2□□□□□ -0.62
Ccdc171-201ENSMUST00000053414 Cers3Q1A3B0 383 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms