RNA–Protein interactions for RNA: ENSMUST00000052708.6

Ckap2l-201, Transcript of Cytoskeleton-associated protein 2-like, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2l, Length 3,137 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2l-201ENSMUST00000052708 Tjp1P39447 1745 aaKnown RBP11.71□□□□□ -0.53
Ckap2l-201ENSMUST00000052708 CastP51125 788 aa11.71□□□□□ -0.53
Ckap2l-201ENSMUST00000052708 Cdc37l1Q9CZP7 335 aa11.71□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Shank2Q80Z38 1476 aa11.71□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Cacna1sQ02789 1880 aa11.7□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Amotl1Q9D4H4 968 aa11.7□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Msh6P54276 1358 aaKnown RBP11.69□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Qtrt2B8ZXI1 415 aa11.69□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Zfp777B9EKF4 885 aa11.69□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Irx3P81067 507 aa11.69□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 ZgpatQ8VDM1 511 aa11.69□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Klhdc4Q921I2 584 aa11.69□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 HypkQ9CR41 129 aa11.69□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Tom1O88746 492 aa11.69□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Lrp6O88572 1613 aa11.69□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Rbm25B2RY56 838 aaKnown RBP11.69□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Ksr2Q3UVC0 959 aa11.69□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Ipo9Q91YE6 1041 aa11.69□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Iqcf3Q9D498 203 aa11.68□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Abcc12Q80WJ6 1366 aa11.68□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Gsdma3Q5Y4Y6 464 aa11.68□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Arhgef1Q61210 920 aaKnown RBP11.67□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 TkfcQ8VC30 578 aa11.67□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Sos1Q62245 1319 aa11.67□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Rab11fip3Q8CHD8 1047 aa11.67□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Prim1P20664 417 aa11.66□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Nwd2Q6P5U7 1742 aa11.66□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Gnai1B2RSH2 354 aa11.66□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Gm10471E9Q1C7 252 aa11.66□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Hsp90aa1P07901 733 aaKnown RBP11.66□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Lrrc59Q922Q8 307 aaKnown RBP11.66□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Gnai3Q9DC51 354 aa11.66□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Ccar1Q8CH18 1146 aaKnown RBP11.65□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Tiam2Q6ZPF3 1715 aa11.65□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 ThemisQ8BGW0 636 aa11.65□□□□□ -0.54
Ckap2l-201ENSMUST00000052708 Ltbp1Q8CG19 1712 aa11.65□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Vamp4O70480 141 aa11.64□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Nsd3Q6P2L6 1439 aa11.64□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Abca3Q8R420 1704 aa11.64□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Igsf1Q7TQA1 1317 aa11.64□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Ggnbp2Q5SV77 696 aa11.64□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Znf521Q6KAS7 1311 aa11.63□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Plcd4Q8K3R3 807 aa11.63□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Zranb3Q6NZP1 1069 aa11.62□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Rwdd1Q9CQK7 243 aa11.62□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Pdzd9Q9D9M4 266 aa11.62□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Foxp4Q9DBY0 795 aaKnown RBP11.62□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Kcnh8P59111 1102 aa11.62□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Cyp2d12Q8BVD2 504 aa11.62□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Cntnap1O54991 1385 aa11.62□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Usp16Q99LG0 825 aa11.62□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Senp3Q9EP97 568 aaKnown RBP11.62□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Ddx54Q8K4L0 874 aaKnown RBP11.61□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Ccdc171E9Q1U1 1324 aa11.61□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 HdgfP51859 237 aaKnown RBP11.61□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 KarsQ99MN1 595 aaKnown RBP11.61□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Plekhd1B2RPU2 505 aa11.6□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Cypt2Q6P924 180 aa11.6□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Phkg2Q9DB30 406 aa11.6□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Ppp1r3fQ9JIG4 799 aa11.6□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Col4a1P02463 1669 aa11.6□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Rtf1A2AQ19 715 aaKnown RBP11.6□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Larp1Q6ZQ58 1072 aaKnown RBP11.6□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Fam50bQ9WTJ8 334 aa11.6□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Apbb1Q9QXJ1 710 aa11.59□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Ccdc60Q8C4J0 545 aa11.59□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Ssfa2Q922B9 1252 aa11.59□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Trim26Q99PN3 545 aa11.59□□□□□ -0.55
Ckap2l-201ENSMUST00000052708 Slc5a4bQ91ZP4 660 aa11.58□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Sipa1l3G3X9J0 1776 aa11.58□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Pnpla7A2AJ88 1352 aa11.58□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 NudcO35685 332 aaKnown RBP11.58□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Chl1P70232 1209 aa11.58□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Zpr1Q62384 459 aa11.58□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 MarsQ68FL6 902 aaKnown RBP11.58□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 U2surpQ6NV83 1029 aaKnown RBP11.58□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Sema6bO54951 886 aa11.58□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Pank1Q8K4K6 548 aa11.58□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Col1a2Q01149 1372 aa11.57□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Asic4Q7TNS7 539 aa11.57□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Plekhm2Q80TQ5 1018 aa11.57□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Pknox2Q8BG99 474 aa11.57□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Cc2d1aQ8K1A6 943 aa11.57□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Atf5O70191 283 aa11.57□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Ccdc129Q14B48 1034 aa11.57□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Kndc1Q0KK55 1742 aa11.56□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Eif4a1P60843 406 aaKnown RBP11.56□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Cavin2Q63918 418 aaKnown RBP11.56□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 4930572O03RikQ8C5Y0 211 aa11.56□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Mst1rQ62190 1378 aa11.56□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Kcnh4A2A5F7 1018 aa11.55□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Tspyl2Q7TQI8 677 aa11.55□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 G3bp1P97855 465 aaKnown RBP11.55□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Q3UPC7 1272 aa11.55□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Trim58Q5NCC9 485 aa11.55□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Polr3glQ8R0C0 218 aa11.55□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Ipo4Q8VI75 1082 aa11.55□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Crb1Q8VHS2 1405 aa11.55□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Ints5Q8CHT3 1018 aa11.55□□□□□ -0.56
Ckap2l-201ENSMUST00000052708 Nyap1Q6PFX7 833 aa11.54□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms