RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Eif4a2P10630 407 aa27.52■■■□□ 2
Ttc39b-201ENSMUST00000030205 Zcwpw1Q6IR42 630 aa27.52■■■□□ 2
Ttc39b-201ENSMUST00000030205 PappaQ8R4K8 1624 aa27.52■■■□□ 2
Ttc39b-201ENSMUST00000030205 Ccnl1Q52KE7 532 aaKnown RBP27.51■■□□□ 1.99
Ttc39b-201ENSMUST00000030205 MeiocA2AG06 965 aa27.5■■□□□ 1.99
Ttc39b-201ENSMUST00000030205 Lrp5Q91VN0 1614 aa27.49■■□□□ 1.99
Ttc39b-201ENSMUST00000030205 Egfem1Q8C088 590 aa27.48■■□□□ 1.99
Ttc39b-201ENSMUST00000030205 Mtfr1lQ9CWE0 289 aa27.48■■□□□ 1.99
Ttc39b-201ENSMUST00000030205 Gprasp1Q5U4C1 1347 aa27.46■■□□□ 1.99
Ttc39b-201ENSMUST00000030205 Tns2Q8CGB6 1400 aa27.45■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Jdp2P97875 163 aa27.45■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Eif3bQ8JZQ9 803 aaKnown RBP27.45■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Gm21663A0A0G2JE01 267 aa27.44■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Gm7361D3Z6R1 267 aa27.44■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 5031410I06RikE9Q4E0 267 aa27.44■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Gm1979E9QAN3 267 aa27.44■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Gm5862K7N5V5 267 aa27.44■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Gm10220K7N660 267 aa27.44■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Zswim8Q3UHH1 1832 aaKnown RBP27.44■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Bicdl1A0JNT9 577 aa27.43■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Chrna2Q91X60 512 aa27.43■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 PnisrA2AJT4 805 aaKnown RBP27.42■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Rnf180Q3U827 592 aa27.42■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Trim28Q62318 834 aa27.41■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Sgip1Q8VD37 806 aa27.41■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Zscan10Q3URR7 782 aa27.4■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Msl1Q6PDM1 616 aa27.4■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Slc5a1Q8C3K6 665 aa27.4■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Ppm1fQ8CGA0 452 aa27.4■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 Crb1Q8VHS2 1405 aa27.4■■□□□ 1.98
Ttc39b-201ENSMUST00000030205 CoblQ5NBX1 1337 aaKnown RBP27.39■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Magea6O89010 325 aa27.38■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 NppbP40753 121 aa27.38■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 MpripP97434 1024 aa27.38■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Magea3Q6T340 320 aa27.38■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Col23a1Q8K4G2 532 aa27.38■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Hdac6Q9Z2V5 1149 aa27.38■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Rsph6aQ8CDR2 708 aa27.37■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Ppp1r15aP17564 657 aa27.36■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Prom2Q3UUY6 835 aa27.36■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Yy1Q00899 414 aa27.35■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Usp21Q9QZL6 566 aa27.35■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Tjp1P39447 1745 aaKnown RBP27.35■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Asic4Q7TNS7 539 aa27.34■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Phkg2Q9DB30 406 aa27.34■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 ClspnQ80YR7 1315 aa27.33■■□□□ 1.97
Ttc39b-201ENSMUST00000030205 Ints5Q8CHT3 1018 aa27.32■■□□□ 1.96
Ttc39b-201ENSMUST00000030205 Sumf1Q8R0F3 372 aa27.31■■□□□ 1.96
Ttc39b-201ENSMUST00000030205 Sned1Q70E20 1403 aa27.31■■□□□ 1.96
Ttc39b-201ENSMUST00000030205 Larp1bA0A0A6YXJ7 370 aaKnown RBP27.3■■□□□ 1.96
Ttc39b-201ENSMUST00000030205 Cald1E9QA15 768 aaKnown RBP27.3■■□□□ 1.96
Ttc39b-201ENSMUST00000030205 Rapgefl1Q68EF8 662 aa27.3■■□□□ 1.96
Ttc39b-201ENSMUST00000030205 Znrd1-asQ8R0E5 213 aa27.3■■□□□ 1.96
Ttc39b-201ENSMUST00000030205 Mrps5Q99N87 432 aaKnown RBP27.3■■□□□ 1.96
Ttc39b-201ENSMUST00000030205 Gm13023A2A8N2 498 aa27.29■■□□□ 1.96
Ttc39b-201ENSMUST00000030205 Ssfa2Q922B9 1252 aa27.29■■□□□ 1.96
Ttc39b-201ENSMUST00000030205 Pdzd9Q9D9M4 266 aa27.29■■□□□ 1.96
Ttc39b-201ENSMUST00000030205 Atg3Q9CPX6 314 aa27.28■■□□□ 1.96
Ttc39b-201ENSMUST00000030205 Gsdma3Q5Y4Y6 464 aa27.26■■□□□ 1.95
Ttc39b-201ENSMUST00000030205 Plin1Q8CGN5 517 aa27.26■■□□□ 1.95
Ttc39b-201ENSMUST00000030205 Spata31d1bE9QA57 1361 aa27.25■■□□□ 1.95
Ttc39b-201ENSMUST00000030205 Msh6P54276 1358 aaKnown RBP27.25■■□□□ 1.95
Ttc39b-201ENSMUST00000030205 Smarcc1P97496 1104 aa27.24■■□□□ 1.95
Ttc39b-201ENSMUST00000030205 Jmjd4Q8BFT6 427 aa27.24■■□□□ 1.95
Ttc39b-201ENSMUST00000030205 Slc12a5Q91V14 1138 aa27.24■■□□□ 1.95
Ttc39b-201ENSMUST00000030205 Chmp7Q8R1T1 451 aa27.23■■□□□ 1.95
Ttc39b-201ENSMUST00000030205 Plekhg5Q66T02 1073 aa27.22■■□□□ 1.95
Ttc39b-201ENSMUST00000030205 NefmP08553 848 aa27.21■■□□□ 1.95
Ttc39b-201ENSMUST00000030205 HypkQ9CR41 129 aa27.21■■□□□ 1.95
Ttc39b-201ENSMUST00000030205 Kiaa1107Q80TK0 1369 aa27.21■■□□□ 1.95
Ttc39b-201ENSMUST00000030205 Dcaf5Q80T85 946 aa27.2■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Amotl1Q9D4H4 968 aa27.2■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Kcnn1Q9EQR3 537 aa27.2■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Ubr3Q5U430 1889 aa27.19■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Gpr162Q3UN16 588 aa27.19■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Aox2Q5SGK3 1345 aa27.18■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Zfp777B9EKF4 885 aa27.18■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Miga2Q8BK03 593 aa27.18■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Cap2Q9CYT6 476 aa27.17■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Plch1Q4KWH5 1682 aa27.17■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Igf2rQ07113 2483 aaKnown RBP27.16■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Sos1Q62245 1319 aa27.15■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Col11a2Q64739 1736 aa27.14■■□□□ 1.94
Ttc39b-201ENSMUST00000030205 Mcm10Q0VBD2 885 aa27.13■■□□□ 1.93
Ttc39b-201ENSMUST00000030205 Rnaseh2aQ9CWY8 301 aa27.13■■□□□ 1.93
Ttc39b-201ENSMUST00000030205 P2rx7Q9Z1M0 595 aa27.13■■□□□ 1.93
Ttc39b-201ENSMUST00000030205 TnikP83510 1323 aa27.13■■□□□ 1.93
Ttc39b-201ENSMUST00000030205 CpzQ8R4V4 654 aa27.12■■□□□ 1.93
Ttc39b-201ENSMUST00000030205 Trpm3Q5F4S9 1721 aa27.11■■□□□ 1.93
Ttc39b-201ENSMUST00000030205 Ric1Q69ZJ7 1422 aa27.11■■□□□ 1.93
Ttc39b-201ENSMUST00000030205 C4bP01029 1738 aa27.1■■□□□ 1.93
Ttc39b-201ENSMUST00000030205 Camkk2Q8C078 588 aa27.09■■□□□ 1.93
Ttc39b-201ENSMUST00000030205 RtcbQ99LF4 505 aaKnown RBP27.09■■□□□ 1.93
Ttc39b-201ENSMUST00000030205 Nkx2-3P97334 362 aa27.08■■□□□ 1.93
Ttc39b-201ENSMUST00000030205 Smg7Q5RJH6 1138 aaKnown RBP27.07■■□□□ 1.92
Ttc39b-201ENSMUST00000030205 Ccdc155Q80VJ8 648 aa27.07■■□□□ 1.92
Ttc39b-201ENSMUST00000030205 PalmQ9Z0P4 383 aa27.07■■□□□ 1.92
Ttc39b-201ENSMUST00000030205 ScaperF8VQ70 1398 aaKnown RBP27.06■■□□□ 1.92
Ttc39b-201ENSMUST00000030205 Spef2Q8C9J3 1734 aa27.05■■□□□ 1.92
Ttc39b-201ENSMUST00000030205 Tgfb2P27090 414 aa27.05■■□□□ 1.92
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms