RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Ncapd2Q8K2Z4 1392 aa18.67■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Dennd6aQ8BH65 605 aa18.67■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Cabp4Q8VHC5 271 aa18.67■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Plcb2A3KGF7 1181 aa18.66■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Mcm4P49717 862 aa18.66■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Idi1P58044 227 aa18.66■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Rsph3aQ3UFY4 516 aa18.66■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Plcd4Q8K3R3 807 aa18.66■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 FancaQ9JL70 1439 aa18.66■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Pik3c2aQ61194 1686 aa18.65■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Mcm2P97310 904 aa18.65■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Adamtsl3G3UXC7 1706 aa18.65■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Gm21190A0A0G2JGJ6 266 aa18.65■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Eya1P97767 591 aa18.65■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Phf23Q8BSN5 401 aa18.65■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Abcc10Q8R4P9 1501 aa18.64■□□□□ 0.58
Nkx3-1-201ENSMUST00000022646 Anapc15-psA0A140T8L6 141 aa18.64■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Nckap5lQ6GQX2 1323 aa18.64■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Ubr1O70481 1757 aa18.64■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Ddit3P35639 168 aa18.64■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Sv2bQ8BG39 683 aa18.64■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Tet3Q8BG87 1668 aa18.64■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Nlgn1Q99K10 843 aa18.64■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Arap3Q8R5G7 1538 aa18.63■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Kdm4cQ8VCD7 1054 aa18.63■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Zfp777B9EKF4 885 aa18.63■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Map2P20357 1828 aa18.62■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Camta1A2A891 1682 aa18.62■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Col16a1Q8BLX7 1580 aa18.61■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Ppip5k2Q6ZQB6 1129 aa18.61■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Ppp6r3Q922D4 844 aa18.61■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Slit2Q9R1B9 1521 aa18.61■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Ccne1Q61457 408 aa18.61■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Dnttip2Q8R2M2 758 aaKnown RBP18.61■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Cc2d1aQ8K1A6 943 aa18.61■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Dmrtc1Q9D9R7 182 aa18.61■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Pdia3P27773 505 aaKnown RBP18.6■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 1700010I14RikQ7TPG0 532 aa18.6■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.6■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Atg4a-psA0A0G2JFS9 396 aa18.6■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Atg4aQ8C9S8 396 aa18.6■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Fam83gQ5SWY7 812 aa18.59■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Frmpd2A0A140LI67 1392 aa18.59■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 D430041D05RikF6ZGR6 1678 aa18.59■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Gm10563F6WIE4 79 aa18.59■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Nucb1Q02819 459 aaKnown RBP18.59■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 EngaseQ8BX80 734 aa18.59■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Ap3b2Q9JME5 1082 aa18.58■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Stk11ipQ3TAA7 1072 aa18.58■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Q3TQI7 289 aaKnown RBP18.58■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 4933402E13RikQ9D4D2 429 aa18.58■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Cyp46a1Q9WVK8 500 aa18.58■□□□□ 0.57
Nkx3-1-201ENSMUST00000022646 Amer1Q7TS75 1132 aa18.58■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Mon2Q80TL7 1715 aa18.56■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Scn7aB1AYL1 1681 aa18.56■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Q9D2X8 372 aa18.55■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 C5P06684 1680 aa18.55■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Igsf1Q7TQA1 1317 aa18.55■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Msh6P54276 1358 aaKnown RBP18.55■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Casq1O09165 405 aa18.54■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Hoxc9P09633 260 aa18.54■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 DekQ7TNV0 380 aaKnown RBP18.54■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Gnai2P08752 355 aaKnown RBP18.54■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Ptpn23Q6PB44 1692 aa18.54■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Als2Q920R0 1651 aa18.54■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Foxp4Q9DBY0 795 aaKnown RBP18.54■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Trpm3Q5F4S9 1721 aa18.53■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Srgap3Q812A2 1099 aa18.53■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 HypkQ9CR41 129 aa18.53■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Bcar3Q9QZK2 820 aa18.53■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Tmem132eQ6IEE6 982 aa18.52■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 PtprvP70289 1705 aa18.52■□□□□ 0.56
Nkx3-1-201ENSMUST00000022646 Il4rP16382 810 aa18.52■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Rims2Q9EQZ7 1530 aa18.51■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Nphp1Q9QY53 687 aa18.51■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Elp1Q7TT37 1333 aaKnown RBP18.51■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Ppp1r42Q8R1Z4 357 aa18.51■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Tnnt1O88346 262 aa18.5■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Slc35g1Q8BY79 368 aa18.5■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 CalcaP70160 136 aa18.5■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Tmem94Q7TSH8 1360 aa18.5■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Bloc1s4Q8VED2 215 aa18.5■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Chpf2Q3UU43 768 aa18.49■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Erc2Q6PH08 957 aa18.49■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Cyp2d12Q8BVD2 504 aa18.48■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Ahnak2E9PYB0 1738 aaKnown RBP18.47■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 AU015836B2RUM3 263 aa18.47■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Atf5O70191 283 aa18.47■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Irx6Q9ER75 438 aa18.47■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Zkscan2G3X952 960 aa18.47■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Ipo4Q8VI75 1082 aa18.47■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Phf14Q9D4H9 881 aa18.47■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Cyp27a1Q9DBG1 533 aa18.47■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Mmp8O70138 465 aa18.46■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Rad17Q6NXW6 688 aa18.46■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Bag4Q8CI61 457 aa18.46■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Prune1Q8BIW1 454 aa18.46■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 RestQ8VIG1 1082 aa18.46■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 Disp3A3KFU9 1347 aa18.46■□□□□ 0.55
Nkx3-1-201ENSMUST00000022646 ScaperF8VQ70 1398 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms