RNA–Protein interactions for RNA: ENSMUST00000003444.4

Ccdc65-201, Transcript of Coiled-coil domain-containing protein 65, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc65, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65-201ENSMUST00000003444 Fchsd2Q3USJ8 740 aa13.33□□□□□ -0.27
Ccdc65-201ENSMUST00000003444 Dcaf11Q91VU6 549 aa13.33□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Klc3Q91W40 508 aa13.33□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Slc34a2Q9DBP0 697 aa13.33□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 ErfeQ6PGN1 340 aa13.32□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Egfem1Q8C088 590 aa13.32□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Pank3Q8R2W9 370 aa13.32□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 ApobrQ8VBT6 942 aa13.31□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Igsf1Q7TQA1 1317 aa13.31□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Eya1P97767 591 aa13.31□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Emilin1Q99K41 1017 aa13.31□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Larp1Q6ZQ58 1072 aaKnown RBP13.3□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 MeiocA2AG06 965 aa13.29□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Hirip3Q8BLH7 601 aa13.29□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Mtfr1lQ9CWE0 289 aa13.29□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Tnnt3Q9QZ47 272 aa13.29□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Zswim8Q3UHH1 1832 aaKnown RBP13.29□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Zcwpw1Q6IR42 630 aa13.29□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Inpp5dQ9ES52 1191 aa13.29□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Gprasp1Q5U4C1 1347 aa13.28□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Ccnl1Q52KE7 532 aaKnown RBP13.28□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Sin3aQ60520 1274 aaKnown RBP13.28□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Eif3bQ8JZQ9 803 aaKnown RBP13.28□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 PnisrA2AJT4 805 aaKnown RBP13.27□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Eif4a2P10630 407 aa13.27□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 Rnf180Q3U827 592 aa13.27□□□□□ -0.28
Ccdc65-201ENSMUST00000003444 NppbP40753 121 aa13.27□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Rad23bP54728 416 aa13.27□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Jdp2P97875 163 aa13.27□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Tns2Q8CGB6 1400 aa13.26□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Sgip1Q8VD37 806 aa13.26□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Tjp1P39447 1745 aaKnown RBP13.25□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Gm21663A0A0G2JE01 267 aa13.25□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Gm7361D3Z6R1 267 aa13.25□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 5031410I06RikE9Q4E0 267 aa13.25□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Gm1979E9QAN3 267 aa13.25□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Gm5862K7N5V5 267 aa13.25□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Gm10220K7N660 267 aa13.25□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Trim28Q62318 834 aa13.25□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Crb1Q8VHS2 1405 aa13.25□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 CoblQ5NBX1 1337 aaKnown RBP13.24□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Bicdl1A0JNT9 577 aa13.23□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 CenpbP27790 599 aa13.23□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Slc5a1Q8C3K6 665 aa13.23□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Hdac6Q9Z2V5 1149 aa13.23□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Magea6O89010 325 aa13.23□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Ppp1r15aP17564 657 aa13.23□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Zscan10Q3URR7 782 aa13.23□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Magea3Q6T340 320 aa13.23□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Chrna2Q91X60 512 aa13.23□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Ppm1fQ8CGA0 452 aa13.22□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Col23a1Q8K4G2 532 aa13.22□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Yy1Q00899 414 aa13.21□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Rsph6aQ8CDR2 708 aa13.21□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Phkg2Q9DB30 406 aa13.21□□□□□ -0.29
Ccdc65-201ENSMUST00000003444 Zfp777B9EKF4 885 aa13.21□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Ssfa2Q922B9 1252 aa13.21□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Mrps5Q99N87 432 aaKnown RBP13.21□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Stra8P70278 393 aa13.2□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Prom2Q3UUY6 835 aa13.2□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Gsdma3Q5Y4Y6 464 aa13.2□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Msl1Q6PDM1 616 aa13.2□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Znrd1-asQ8R0E5 213 aa13.2□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Usp21Q9QZL6 566 aa13.2□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Spata31d1bE9QA57 1361 aa13.2□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Ubr3Q5U430 1889 aa13.2□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Cald1E9QA15 768 aaKnown RBP13.19□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 MpripP97434 1024 aa13.19□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Asic4Q7TNS7 539 aa13.19□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Sned1Q70E20 1403 aa13.19□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Msh6P54276 1358 aaKnown RBP13.18□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Ints5Q8CHT3 1018 aa13.18□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Sumf1Q8R0F3 372 aa13.18□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Plch1Q4KWH5 1682 aa13.17□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Jmjd4Q8BFT6 427 aa13.17□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Pdzd9Q9D9M4 266 aa13.17□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Gm13023A2A8N2 498 aa13.16□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Plekhg5Q66T02 1073 aa13.16□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Atg3Q9CPX6 314 aa13.16□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Trpm3Q5F4S9 1721 aa13.16□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Kiaa1107Q80TK0 1369 aa13.16□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 C4bP01029 1738 aa13.16□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Chmp7Q8R1T1 451 aa13.16□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 HypkQ9CR41 129 aa13.16□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.15□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Smarcc1P97496 1104 aa13.15□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Amotl1Q9D4H4 968 aa13.15□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Kcnn1Q9EQR3 537 aa13.15□□□□□ -0.3
Ccdc65-201ENSMUST00000003444 Slc12a5Q91V14 1138 aa13.14□□□□□ -0.31
Ccdc65-201ENSMUST00000003444 Col11a2Q64739 1736 aa13.14□□□□□ -0.31
Ccdc65-201ENSMUST00000003444 Rapgefl1Q68EF8 662 aa13.14□□□□□ -0.31
Ccdc65-201ENSMUST00000003444 Dcaf5Q80T85 946 aa13.14□□□□□ -0.31
Ccdc65-201ENSMUST00000003444 Igf2rQ07113 2483 aaKnown RBP13.14□□□□□ -0.31
Ccdc65-201ENSMUST00000003444 Ric1Q69ZJ7 1422 aa13.14□□□□□ -0.31
Ccdc65-201ENSMUST00000003444 Gpr162Q3UN16 588 aa13.13□□□□□ -0.31
Ccdc65-201ENSMUST00000003444 Aox2Q5SGK3 1345 aa13.13□□□□□ -0.31
Ccdc65-201ENSMUST00000003444 Ubr2Q6WKZ8 1755 aa13.12□□□□□ -0.31
Ccdc65-201ENSMUST00000003444 Kndc1Q0KK55 1742 aa13.12□□□□□ -0.31
Ccdc65-201ENSMUST00000003444 Spef2Q8C9J3 1734 aa13.12□□□□□ -0.31
Ccdc65-201ENSMUST00000003444 Miga2Q8BK03 593 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms