RNA–Protein interactions for RNA: ENSMUST00000003444.4

Ccdc65-201, Transcript of Coiled-coil domain-containing protein 65, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc65, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65-201ENSMUST00000003444 Gm35339A0A140LHH9 1649 aa22.96■■□□□ 1.27
Ccdc65-201ENSMUST00000003444 NischQ80TM9 1593 aa22.46■■□□□ 1.19
Ccdc65-201ENSMUST00000003444 Abcc8B2RUS7 1588 aa21.81■■□□□ 1.08
Ccdc65-201ENSMUST00000003444 Abcc9P70170 1546 aa21.72■■□□□ 1.07
Ccdc65-201ENSMUST00000003444 ScribQ80U72 1612 aa21.22■□□□□ 0.99
Ccdc65-201ENSMUST00000003444 NacadQ5SWP3 1504 aa20.51■□□□□ 0.87
Ccdc65-201ENSMUST00000003444 Kdm5dQ62240 1548 aa20.43■□□□□ 0.86
Ccdc65-201ENSMUST00000003444 Sycp2Q9CUU3 1500 aa20.12■□□□□ 0.81
Ccdc65-201ENSMUST00000003444 Dcaf1Q80TR8 1506 aa20.02■□□□□ 0.8
Ccdc65-201ENSMUST00000003444 BicraF8VPZ9 1578 aa19.89■□□□□ 0.78
Ccdc65-201ENSMUST00000003444 Dnajc5bQ9CQ94 199 aa19.72■□□□□ 0.75
Ccdc65-201ENSMUST00000003444 Rb1cc1Q9ESK9 1588 aa19.56■□□□□ 0.72
Ccdc65-201ENSMUST00000003444 Pds5bQ4VA53 1446 aaKnown RBP19.4■□□□□ 0.7
Ccdc65-201ENSMUST00000003444 Thoc2B1AZI6 1594 aaKnown RBP19.36■□□□□ 0.69
Ccdc65-201ENSMUST00000003444 Ccdc180J3QNE4 1664 aa19.3■□□□□ 0.68
Ccdc65-201ENSMUST00000003444 Crybg2B7ZCC2 1516 aa19.28■□□□□ 0.68
Ccdc65-201ENSMUST00000003444 Baz1aO88379 1555 aa19.27■□□□□ 0.67
Ccdc65-201ENSMUST00000003444 Atad2bE9Q166 1460 aaKnown RBP19.15■□□□□ 0.66
Ccdc65-201ENSMUST00000003444 Rhox8Q6VSS7 320 aa19.05■□□□□ 0.64
Ccdc65-201ENSMUST00000003444 Cc2d2aQ8CFW7 1633 aa19.02■□□□□ 0.64
Ccdc65-201ENSMUST00000003444 Zcchc6Q5BLK4 1491 aaKnown RBP18.99■□□□□ 0.63
Ccdc65-201ENSMUST00000003444 Ercc6F8VPZ5 1481 aa18.96■□□□□ 0.63
Ccdc65-201ENSMUST00000003444 Smarca2Q6DIC0 1577 aa18.9■□□□□ 0.62
Ccdc65-201ENSMUST00000003444 Smarca4Q3TKT4 1613 aaKnown RBP18.88■□□□□ 0.61
Ccdc65-201ENSMUST00000003444 Fam135aQ6NS59 1506 aa18.85■□□□□ 0.61
Ccdc65-201ENSMUST00000003444 Iqgap2Q3UQ44 1575 aa18.82■□□□□ 0.6
Ccdc65-201ENSMUST00000003444 Wdr62Q3U3T8 1523 aa18.7■□□□□ 0.58
Ccdc65-201ENSMUST00000003444 Cecr2E9Q2Z1 1453 aa18.7■□□□□ 0.58
Ccdc65-201ENSMUST00000003444 Frmpd1A2AKB4 1549 aa18.68■□□□□ 0.58
Ccdc65-201ENSMUST00000003444 Baz1bQ9Z277 1479 aa18.67■□□□□ 0.58
Ccdc65-201ENSMUST00000003444 Phldb1Q6PDH0 1371 aaKnown RBP18.64■□□□□ 0.57
Ccdc65-201ENSMUST00000003444 Ubl4bQ9CQ84 188 aa18.46■□□□□ 0.55
Ccdc65-201ENSMUST00000003444 Unc13aQ4KUS2 1712 aa18.46■□□□□ 0.55
Ccdc65-201ENSMUST00000003444 Mrc2Q64449 1479 aa18.4■□□□□ 0.54
Ccdc65-201ENSMUST00000003444 Cttnbp2B9EJA2 1648 aa18.26■□□□□ 0.51
Ccdc65-201ENSMUST00000003444 CftrP26361 1476 aa18.24■□□□□ 0.51
Ccdc65-201ENSMUST00000003444 Rtl1Q7M732 1744 aa18.18■□□□□ 0.5
Ccdc65-201ENSMUST00000003444 Dnajc5P60904 198 aa18.18■□□□□ 0.5
Ccdc65-201ENSMUST00000003444 Synj1Q8CHC4 1574 aa18.17■□□□□ 0.5
Ccdc65-201ENSMUST00000003444 Brd4Q9ESU6 1400 aaKnown RBP18.12■□□□□ 0.49
Ccdc65-201ENSMUST00000003444 Lrriq1Q0P5X1 1673 aa18.04■□□□□ 0.48
Ccdc65-201ENSMUST00000003444 Trim41Q5NCC3 630 aa18.03■□□□□ 0.48
Ccdc65-201ENSMUST00000003444 Cux2P70298 1426 aa17.94■□□□□ 0.46
Ccdc65-201ENSMUST00000003444 Rsf1E9PWW9 1441 aaKnown RBP17.94■□□□□ 0.46
Ccdc65-201ENSMUST00000003444 Kif21aQ9QXL2 1672 aa17.9■□□□□ 0.46
Ccdc65-201ENSMUST00000003444 Ccdc136Q3TVA9 1136 aa17.89■□□□□ 0.45
Ccdc65-201ENSMUST00000003444 Kif15Q6P9L6 1387 aa17.88■□□□□ 0.45
Ccdc65-201ENSMUST00000003444 Esf1Q3V1V3 845 aaKnown RBP17.86■□□□□ 0.45
Ccdc65-201ENSMUST00000003444 Lamc3Q9R0B6 1581 aa17.8■□□□□ 0.44
Ccdc65-201ENSMUST00000003444 Eif4g3Q80XI3 1579 aaKnown RBP17.78■□□□□ 0.44
Ccdc65-201ENSMUST00000003444 Shroom2A2ALU4 1481 aa17.73■□□□□ 0.43
Ccdc65-201ENSMUST00000003444 Npm1Q61937 292 aaKnown RBP17.73■□□□□ 0.43
Ccdc65-201ENSMUST00000003444 Cep164Q5DU05 1446 aa17.67■□□□□ 0.42
Ccdc65-201ENSMUST00000003444 Urb2E9Q7L1 1524 aaKnown RBP17.6■□□□□ 0.41
Ccdc65-201ENSMUST00000003444 Dhx29Q6PGC1 1365 aaKnown RBP17.54■□□□□ 0.4
Ccdc65-201ENSMUST00000003444 Plb1Q3TTY0 1478 aa17.54■□□□□ 0.4
Ccdc65-201ENSMUST00000003444 Col17a1Q07563 1470 aa17.52■□□□□ 0.4
Ccdc65-201ENSMUST00000003444 Ccdc18Q640L5 1455 aa17.52■□□□□ 0.4
Ccdc65-201ENSMUST00000003444 TnnQ80Z71 1560 aa17.52■□□□□ 0.39
Ccdc65-201ENSMUST00000003444 Crocc2F6XLV1 1638 aa17.49■□□□□ 0.39
Ccdc65-201ENSMUST00000003444 Top2bQ64511 1612 aa17.48■□□□□ 0.39
Ccdc65-201ENSMUST00000003444 LrpprcQ6PB66 1392 aaKnown RBP17.47■□□□□ 0.39
Ccdc65-201ENSMUST00000003444 Pabpn1Q8CCS6 302 aaKnown RBP17.46■□□□□ 0.39
Ccdc65-201ENSMUST00000003444 Il27Q8K3I6 234 aa17.44■□□□□ 0.38
Ccdc65-201ENSMUST00000003444 Camsap1A2AHC3 1581 aa17.44■□□□□ 0.38
Ccdc65-201ENSMUST00000003444 Ift140E9PY46 1464 aa17.4■□□□□ 0.38
Ccdc65-201ENSMUST00000003444 Rusc2Q80U22 1514 aa17.39■□□□□ 0.37
Ccdc65-201ENSMUST00000003444 Golga3P55937 1487 aa17.36■□□□□ 0.37
Ccdc65-201ENSMUST00000003444 PogzQ8BZH4 1409 aaKnown RBP17.35■□□□□ 0.37
Ccdc65-201ENSMUST00000003444 Zcchc11B2RX14 1644 aaKnown RBP17.32■□□□□ 0.36
Ccdc65-201ENSMUST00000003444 Pelp1Q9DBD5 1123 aaKnown RBP17.29■□□□□ 0.36
Ccdc65-201ENSMUST00000003444 Duox2A2AQ99 1517 aa17.26■□□□□ 0.35
Ccdc65-201ENSMUST00000003444 Cngb1E1AZ71 1325 aa17.24■□□□□ 0.35
Ccdc65-201ENSMUST00000003444 Fmn1Q05860 1466 aa17.24■□□□□ 0.35
Ccdc65-201ENSMUST00000003444 Setd1bQ8CFT2 1985 aa17.22■□□□□ 0.35
Ccdc65-201ENSMUST00000003444 Disp1Q3TDN0 1521 aa17.21■□□□□ 0.35
Ccdc65-201ENSMUST00000003444 Pbrm1Q8BSQ9 1634 aaKnown RBP17.2■□□□□ 0.34
Ccdc65-201ENSMUST00000003444 Grin2bQ01097 1482 aa17.16■□□□□ 0.34
Ccdc65-201ENSMUST00000003444 Nup160Q9Z0W3 1402 aaKnown RBP17.16■□□□□ 0.34
Ccdc65-201ENSMUST00000003444 Cc2d2bA0A286YDU8 1405 aa17.15■□□□□ 0.34
Ccdc65-201ENSMUST00000003444 Samd9lQ69Z37 1561 aa17.13■□□□□ 0.33
Ccdc65-201ENSMUST00000003444 Efcab5A0JP43 1406 aa17.08■□□□□ 0.32
Ccdc65-201ENSMUST00000003444 Adgrl3Q80TS3 1537 aa17.04■□□□□ 0.32
Ccdc65-201ENSMUST00000003444 Arhgef5E9Q7D5 1581 aa17.02■□□□□ 0.32
Ccdc65-201ENSMUST00000003444 AqrQ8CFQ3 1481 aaKnown RBP17.01■□□□□ 0.31
Ccdc65-201ENSMUST00000003444 PtprkP35822 1457 aa17.01■□□□□ 0.31
Ccdc65-201ENSMUST00000003444 Fgd6Q69ZL1 1399 aa17■□□□□ 0.31
Ccdc65-201ENSMUST00000003444 Grin2aP35436 1464 aa16.99■□□□□ 0.31
Ccdc65-201ENSMUST00000003444 Cep170Q6A065 1588 aa16.99■□□□□ 0.31
Ccdc65-201ENSMUST00000003444 Rad54l2Q99NG0 1466 aa16.99■□□□□ 0.31
Ccdc65-201ENSMUST00000003444 Magi3Q9EQJ9 1476 aa16.98■□□□□ 0.31
Ccdc65-201ENSMUST00000003444 Gapvd1Q6PAR5 1458 aa16.97■□□□□ 0.31
Ccdc65-201ENSMUST00000003444 Pcdh10E9PXQ7 1057 aa16.95■□□□□ 0.3
Ccdc65-201ENSMUST00000003444 Gm156Q58A37 223 aa16.94■□□□□ 0.3
Ccdc65-201ENSMUST00000003444 Ttbk1Q6PCN3 1308 aa16.91■□□□□ 0.3
Ccdc65-201ENSMUST00000003444 PtprtQ99M80 1454 aa16.91■□□□□ 0.3
Ccdc65-201ENSMUST00000003444 NrkQ9R0G8 1455 aa16.91■□□□□ 0.3
Ccdc65-201ENSMUST00000003444 Gpatch8A2A6A1 1505 aa16.9■□□□□ 0.3
Ccdc65-201ENSMUST00000003444 Abcc1O35379 1528 aa16.87■□□□□ 0.29
Ccdc65-201ENSMUST00000003444 AknaQ80VW7 1404 aa16.85■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms