RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 LAM1P38851 1228 aa1.47□□□□□ -2.17
snR47snR47 AIM46P38885 310 aa1.47□□□□□ -2.17
snR47snR47 MNN10P50108 393 aaKnown RBP1.47□□□□□ -2.17
snR47snR47 FOL2P51601 243 aaKnown RBP1.47□□□□□ -2.17
snR47snR47 YIG1Q08956 461 aa1.47□□□□□ -2.17
snR47snR47 ICT1Q12385 394 aa1.47□□□□□ -2.17
snR47snR47 PMA1P05030 918 aaKnown RBP1.46□□□□□ -2.18
snR47snR47 SAM35P14693 329 aa1.46□□□□□ -2.18
snR47snR47 SUV3P32580 737 aa1.46□□□□□ -2.18
snR47snR47 LST4P34239 828 aa1.46□□□□□ -2.18
snR47snR47 DEF1P35732 738 aaKnown RBP1.46□□□□□ -2.18
snR47snR47 QRI1P43123 477 aaKnown RBP1.46□□□□□ -2.18
snR47snR47 ENV11P53246 860 aa1.46□□□□□ -2.18
snR47snR47 DUS4Q06063 367 aa1.46□□□□□ -2.18
snR47snR47 PHO23P50947 330 aa1.45□□□□□ -2.18
snR47snR47 ROM1P53046 1155 aa1.45□□□□□ -2.18
snR47snR47 MEC3Q02574 474 aa1.45□□□□□ -2.18
snR47snR47 SGD1Q06132 899 aa1.45□□□□□ -2.18
snR47snR47 YAP7Q08182 245 aa1.45□□□□□ -2.18
snR47snR47 KIN1P13185 1064 aa1.44□□□□□ -2.18
snR47snR47 YBR197CP38306 217 aa1.44□□□□□ -2.18
snR47snR47 MSS4P38994 779 aa1.44□□□□□ -2.18
snR47snR47 CWH41P53008 833 aa1.44□□□□□ -2.18
snR47snR47 MCM6P53091 1017 aaKnown RBP1.44□□□□□ -2.18
snR47snR47 AFT2Q08957 416 aa1.44□□□□□ -2.18
snR47snR47 NDJ1Q12366 352 aa1.44□□□□□ -2.18
snR47snR47 PUF4P25339 888 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
snR47snR47 CDC20P26309 610 aa1.43□□□□□ -2.18
snR47snR47 TMT1P32643 299 aa1.43□□□□□ -2.18
snR47snR47 NNK1P36003 928 aa1.43□□□□□ -2.18
snR47snR47 GUA1P38625 525 aaKnown RBP1.43□□□□□ -2.18
snR47snR47 UBA2P52488 636 aa1.43□□□□□ -2.18
snR47snR47 PUS7Q08647 676 aaKnown RBP1.43□□□□□ -2.18
snR47snR47 ENO1P00924 437 aaKnown RBP1.42□□□□□ -2.18
snR47snR47 VAN1P23642 535 aa1.42□□□□□ -2.18
snR47snR47 DCG1P32460 244 aa1.42□□□□□ -2.18
snR47snR47 MDL2P33311 773 aa1.42□□□□□ -2.18
snR47snR47 RGD2P43556 714 aa1.42□□□□□ -2.18
snR47snR47 FOX2Q02207 900 aaKnown RBP1.42□□□□□ -2.18
snR47snR47 TMA10Q06177 86 aa1.42□□□□□ -2.18
snR47snR47 TRS33Q99394 268 aa1.42□□□□□ -2.18
snR47snR47 HTS1P07263 546 aaKnown RBP1.41□□□□□ -2.18
snR47snR47 SRS2P12954 1174 aa1.41□□□□□ -2.18
snR47snR47 PKC1P24583 1151 aa1.41□□□□□ -2.18
snR47snR47 PYC2P32327 1180 aaKnown RBP1.41□□□□□ -2.18
snR47snR47 REI1P38344 393 aaPredicted RBP1.41□□□□□ -2.18
snR47snR47 BRL1P38770 471 aa1.41□□□□□ -2.18
snR47snR47 FIR1P40020 876 aa1.41□□□□□ -2.18
snR47snR47 NTA1P40354 457 aa1.41□□□□□ -2.18
snR47snR47 YGR045CP53229 120 aa1.41□□□□□ -2.18
snR47snR47 CDC6P09119 513 aa1.4□□□□□ -2.19
snR47snR47 SRO9P25567 434 aaKnown RBP1.4□□□□□ -2.19
snR47snR47 YUR1P26725 428 aa1.4□□□□□ -2.19
snR47snR47 RGT1P32862 1170 aa1.4□□□□□ -2.19
snR47snR47 YHL012WP38709 493 aa1.4□□□□□ -2.19
snR47snR47 YER158CP40095 573 aa1.4□□□□□ -2.19
snR47snR47 NPL3Q01560 414 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
snR47snR47 HOF1Q05080 669 aa1.4□□□□□ -2.19
snR47snR47 YOR352WQ08816 343 aa1.4□□□□□ -2.19
snR47snR47 ALG6Q12001 544 aaKnown RBP1.4□□□□□ -2.19
snR47snR47 PRP5P21372 849 aaPredicted RBP1.39□□□□□ -2.19
snR47snR47 KTR2P33550 425 aa1.39□□□□□ -2.19
snR47snR47 HXT8P40886 569 aa1.39□□□□□ -2.19
snR47snR47 STU2P46675 888 aa1.39□□□□□ -2.19
snR47snR47 HNT2P49775 206 aa1.39□□□□□ -2.19
snR47snR47 ELA1P53861 379 aaPredicted RBP1.39□□□□□ -2.19
snR47snR47 PLB2Q03674 706 aa1.39□□□□□ -2.19
snR47snR47 TPP1Q03796 238 aa1.39□□□□□ -2.19
snR47snR47 ACK1Q07622 623 aaPredicted RBP1.39□□□□□ -2.19
snR47snR47 ISC10P32645 267 aa1.38□□□□□ -2.19
snR47snR47 AIM26P32858 118 aa1.38□□□□□ -2.19
snR47snR47 ARL1P38116 183 aaKnown RBP1.38□□□□□ -2.19
snR47snR47 RIM11P38615 370 aa1.38□□□□□ -2.19
snR47snR47 CYC1P00044 109 aaPredicted RBP1.37□□□□□ -2.19
snR47snR47 GAL2P13181 574 aa1.37□□□□□ -2.19
snR47snR47 UTP22P53254 1237 aaPredicted RBP1.37□□□□□ -2.19
snR47snR47 TMN2Q04562 672 aa1.37□□□□□ -2.19
snR47snR47 TIF6Q12522 245 aaKnown RBP1.37□□□□□ -2.19
snR47snR47 SPS1P08458 490 aa1.36□□□□□ -2.19
snR47snR47 MDM10P18409 493 aa1.36□□□□□ -2.19
snR47snR47 NPR1P22211 790 aa1.36□□□□□ -2.19
snR47snR47 IRS4P36115 615 aaKnown RBP1.36□□□□□ -2.19
snR47snR47 SCS3P53012 380 aa1.36□□□□□ -2.19
snR47snR47 ROT1Q03691 256 aa1.36□□□□□ -2.19
snR47snR47 RXT3Q07458 294 aa1.36□□□□□ -2.19
snR47snR47 RSC58Q07979 502 aa1.36□□□□□ -2.19
snR47snR47 IRC10Q08118 586 aa1.36□□□□□ -2.19
snR47snR47 CMR1Q12510 522 aaKnown RBP1.36□□□□□ -2.19
snR47snR47 PSY2P40164 858 aa1.35□□□□□ -2.19
snR47snR47 KTR7P40504 517 aa1.35□□□□□ -2.19
snR47snR47 VPS62P53285 467 aa1.35□□□□□ -2.19
snR47snR47 SEC5P89102 971 aa1.35□□□□□ -2.19
snR47snR47 CTR9P89105 1077 aa1.35□□□□□ -2.19
snR47snR47 RAD55P38953 406 aa1.34□□□□□ -2.19
snR47snR47 COQ11Q05892 277 aa1.34□□□□□ -2.19
snR47snR47 YLR224WQ05947 369 aa1.34□□□□□ -2.19
snR47snR47 AVO1Q08236 1176 aa1.34□□□□□ -2.19
snR47snR47 GPB1Q08886 897 aa1.34□□□□□ -2.19
snR47snR47 APC11Q12157 165 aa1.34□□□□□ -2.19
snR47snR47 COBP00163 385 aa1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms