RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeastyeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI3YPR189W CDC55Q00362 526 aa2.07□□□□□ -2.08
SKI3YPR189W TY1A-DR1Q03856 440 aa2.07□□□□□ -2.08
SKI3YPR189W UTP14Q04500 899 aaKnown RBP2.07□□□□□ -2.08
SKI3YPR189W TY1A-ML1Q04706 440 aaKnown RBP2.07□□□□□ -2.08
SKI3YPR189W TY1A-BRQ12217 440 aa2.07□□□□□ -2.08
SKI3YPR189W TY1A-NL2Q12470 440 aa2.07□□□□□ -2.08
SKI3YPR189W TY1A-GR2Q12485 440 aa2.07□□□□□ -2.08
SKI3YPR189W TPM2P40414 161 aa2.07□□□□□ -2.08
SKI3YPR189W BUD6P41697 788 aa2.07□□□□□ -2.08
SKI3YPR189W CAB1Q04430 367 aa2.07□□□□□ -2.08
SKI3YPR189W DFG5Q05031 458 aa2.07□□□□□ -2.08
SKI3YPR189W BSC2Q05611 235 aa2.07□□□□□ -2.08
SKI3YPR189W MRL1Q06815 381 aa2.07□□□□□ -2.08
SKI3YPR189W ADR1P07248 1323 aa2.07□□□□□ -2.08
SKI3YPR189W YRF1-3P0CX14 1859 aa2.07□□□□□ -2.08
SKI3YPR189W YRF1-7P0CX15 1859 aa2.07□□□□□ -2.08
SKI3YPR189W YRF1-6P53819 1859 aa2.07□□□□□ -2.08
SKI3YPR189W SQT1P35184 431 aa2.07□□□□□ -2.08
SKI3YPR189W FAA3P39002 694 aa2.07□□□□□ -2.08
SKI3YPR189W PTC2P39966 464 aaKnown RBP2.07□□□□□ -2.08
SKI3YPR189W UTP7P40055 554 aaKnown RBP2.07□□□□□ -2.08
SKI3YPR189W KRI1P42846 591 aaKnown RBP2.07□□□□□ -2.08
SKI3YPR189W YGL081WP53156 320 aa2.07□□□□□ -2.08
SKI3YPR189W YGR125WP53273 1036 aa2.07□□□□□ -2.08
SKI3YPR189W BUD20Q08004 166 aaPredicted RBP2.07□□□□□ -2.08
SKI3YPR189W MCD1Q12158 566 aa2.07□□□□□ -2.08
SKI3YPR189W NUP145P49687 1317 aa2.07□□□□□ -2.08
SKI3YPR189W MRPL33P20084 86 aa2.06□□□□□ -2.08
SKI3YPR189W SAP30P38429 201 aa2.06□□□□□ -2.08
SKI3YPR189W RSM26P47141 266 aa2.06□□□□□ -2.08
SKI3YPR189W YJR115WP47152 169 aa2.06□□□□□ -2.08
SKI3YPR189W MON1P53129 644 aa2.06□□□□□ -2.08
SKI3YPR189W SPO75Q07798 868 aa2.06□□□□□ -2.08
SKI3YPR189W CUP1-1P0CX80 61 aa2.06□□□□□ -2.08
SKI3YPR189W CUP1-2P0CX81 61 aa2.06□□□□□ -2.08
SKI3YPR189W SEC2P17065 759 aa2.06□□□□□ -2.08
SKI3YPR189W PRP40P33203 583 aaKnown RBP2.06□□□□□ -2.08
SKI3YPR189W YBR287WP38355 427 aa2.06□□□□□ -2.08
SKI3YPR189W HXT8P40886 569 aa2.06□□□□□ -2.08
SKI3YPR189W OPI10Q08202 246 aa2.06□□□□□ -2.08
SKI3YPR189W INP54Q08227 384 aaKnown RBP2.06□□□□□ -2.08
SKI3YPR189W GIN4Q12263 1142 aa2.06□□□□□ -2.08
SKI3YPR189W NAB3P38996 802 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
SKI3YPR189W NOP2P40991 618 aaKnown RBP2.06□□□□□ -2.08
SKI3YPR189W ECM16Q04217 1267 aaKnown RBP2.06□□□□□ -2.08
SKI3YPR189W SPO20Q04359 397 aa2.06□□□□□ -2.08
SKI3YPR189W ARE1P25628 610 aa2.05□□□□□ -2.08
SKI3YPR189W GRX4P32642 244 aa2.05□□□□□ -2.08
SKI3YPR189W PMC1P38929 1173 aaPredicted RBP2.05□□□□□ -2.08
SKI3YPR189W BDP1P46678 594 aa2.05□□□□□ -2.08
SKI3YPR189W YCS4Q06156 1176 aa2.05□□□□□ -2.08
SKI3YPR189W WTM2Q12206 467 aa2.05□□□□□ -2.08
SKI3YPR189W NUP157P40064 1391 aaKnown RBP2.05□□□□□ -2.08
SKI3YPR189W MCM5P29496 775 aaKnown RBP2.05□□□□□ -2.08
SKI3YPR189W SCD5P34758 872 aa2.05□□□□□ -2.08
SKI3YPR189W ETP1P38748 585 aaKnown RBP2.05□□□□□ -2.08
SKI3YPR189W HLJ1P48353 224 aa2.05□□□□□ -2.08
SKI3YPR189W YVH1Q02256 364 aaKnown RBP2.05□□□□□ -2.08
SKI3YPR189W RGA1P39083 1007 aa2.05□□□□□ -2.08
SKI3YPR189W GEM1P39722 662 aa2.05□□□□□ -2.08
SKI3YPR189W HUL4P40985 892 aa2.05□□□□□ -2.08
SKI3YPR189W YJL181WP46987 611 aa2.05□□□□□ -2.08
SKI3YPR189W CTH1P47976 325 aa2.05□□□□□ -2.08
SKI3YPR189W ISU1Q03020 165 aa2.05□□□□□ -2.08
SKI3YPR189W VMS1Q04311 632 aaKnown RBP2.05□□□□□ -2.08
SKI3YPR189W GYP1Q08484 637 aa2.05□□□□□ -2.08
SKI3YPR189W FLC1Q08967 793 aa2.05□□□□□ -2.08
SKI3YPR189W KAR1P11927 433 aa2.05□□□□□ -2.08
SKI3YPR189W CDC34P14682 295 aa2.05□□□□□ -2.08
SKI3YPR189W SEC61P32915 480 aa2.05□□□□□ -2.08
SKI3YPR189W SYH1Q02875 849 aaKnown RBP2.05□□□□□ -2.08
SKI3YPR189W APC11Q12157 165 aa2.05□□□□□ -2.08
SKI3YPR189W NCR1Q12200 1170 aa2.05□□□□□ -2.08
SKI3YPR189W NYV1Q12255 253 aa2.05□□□□□ -2.08
SKI3YPR189W LDB19Q12502 818 aa2.05□□□□□ -2.08
SKI3YPR189W CCP1P00431 361 aa2.04□□□□□ -2.08
SKI3YPR189W HXK1P04806 485 aaKnown RBP2.04□□□□□ -2.08
SKI3YPR189W FBP26P32604 452 aa2.04□□□□□ -2.08
SKI3YPR189W DYS1P38791 387 aa2.04□□□□□ -2.08
SKI3YPR189W GGA2P38817 585 aaKnown RBP2.04□□□□□ -2.08
SKI3YPR189W CHZ1P40019 153 aaPredicted RBP2.04□□□□□ -2.08
SKI3YPR189W VNX1P42839 908 aa2.04□□□□□ -2.08
SKI3YPR189W FRK1Q03002 865 aaPredicted RBP2.04□□□□□ -2.08
SKI3YPR189W RTT10Q08924 1013 aa2.04□□□□□ -2.08
SKI3YPR189W Q0182Q9ZZW1 134 aa2.04□□□□□ -2.08
SKI3YPR189W YEF3P16521 1044 aaKnown RBP2.04□□□□□ -2.08
SKI3YPR189W HSP60P19882 572 aaKnown RBP2.04□□□□□ -2.08
SKI3YPR189W VMA3P25515 160 aa2.04□□□□□ -2.08
SKI3YPR189W TAT2P38967 592 aa2.04□□□□□ -2.08
SKI3YPR189W SPF1P39986 1215 aaKnown RBP2.04□□□□□ -2.08
SKI3YPR189W ZDS1P50111 915 aaKnown RBP2.04□□□□□ -2.08
SKI3YPR189W DNM1P54861 757 aa2.04□□□□□ -2.08
SKI3YPR189W YDL124WQ07551 312 aaKnown RBP2.04□□□□□ -2.08
SKI3YPR189W ERR1P0CX10 437 aa2.04□□□□□ -2.08
SKI3YPR189W ERR2P0CX11 437 aa2.04□□□□□ -2.08
SKI3YPR189W SEC6P32844 805 aa2.04□□□□□ -2.08
SKI3YPR189W UGA2P38067 497 aa2.04□□□□□ -2.08
SKI3YPR189W QDR2P40474 542 aa2.04□□□□□ -2.08
SKI3YPR189W XKS1P42826 600 aa2.04□□□□□ -2.08
SKI3YPR189W DAS1P47005 663 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 91.6 ms