RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	AGP1	P25376	633 aa		5.71	□□□□□ -1.5
CMR3	YPR013C	PYC2	P32327	1180 aa	Known RBP	5.71	□□□□□ -1.5
CMR3	YPR013C	DUR3	P33413	735 aa		5.71	□□□□□ -1.5
CMR3	YPR013C	YIL165C	P40446	119 aa		5.71	□□□□□ -1.5
CMR3	YPR013C	SAP155	P43612	1002 aa		5.71	□□□□□ -1.5
CMR3	YPR013C	ARG82	P07250	355 aa		5.7	□□□□□ -1.5
CMR3	YPR013C	TAF13	P11747	167 aa		5.7	□□□□□ -1.5
CMR3	YPR013C	SRM1	P21827	482 aa		5.7	□□□□□ -1.5
CMR3	YPR013C	UGA3	P26370	528 aa		5.7	□□□□□ -1.5
CMR3	YPR013C	MRP8	P35719	219 aa		5.7	□□□□□ -1.5
CMR3	YPR013C	PEX28	P38848	579 aa		5.7	□□□□□ -1.5
CMR3	YPR013C	NOP2	P40991	618 aa	Known RBP	5.7	□□□□□ -1.5
CMR3	YPR013C	SHE9	Q04172	456 aa		5.7	□□□□□ -1.5
CMR3	YPR013C	SPO20	Q04359	397 aa		5.7	□□□□□ -1.5
CMR3	YPR013C	NOP14	Q99207	810 aa	Known RBP	5.7	□□□□□ -1.5
CMR3	YPR013C	LEU1	P07264	779 aa	Known RBP	5.69	□□□□□ -1.5
CMR3	YPR013C	PDC6	P26263	563 aa	Known RBP	5.69	□□□□□ -1.5
CMR3	YPR013C	RPL8B	P29453	256 aa	Known RBP	5.69	□□□□□ -1.5
CMR3	YPR013C	STE5	P32917	917 aa		5.69	□□□□□ -1.5
CMR3	YPR013C	CRP1	P38845	465 aa	Known RBP	5.69	□□□□□ -1.5
CMR3	YPR013C	IRR1	P40541	1150 aa		5.69	□□□□□ -1.5
CMR3	YPR013C	SKP1	P52286	194 aa		5.69	□□□□□ -1.5
CMR3	YPR013C	SUB1	P54000	292 aa	Known RBP	5.69	□□□□□ -1.5
CMR3	YPR013C	CUS1	Q02554	436 aa	Predicted RBP	5.69	□□□□□ -1.5
CMR3	YPR013C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
CMR3	YPR013C	CIT1	P00890	479 aa		5.68	□□□□□ -1.5
CMR3	YPR013C	ERR1	P0CX10	437 aa		5.68	□□□□□ -1.5
CMR3	YPR013C	ERR2	P0CX11	437 aa		5.68	□□□□□ -1.5
CMR3	YPR013C	SEC23	P15303	768 aa	Known RBP	5.68	□□□□□ -1.5
CMR3	YPR013C	SBA1	P28707	216 aa	Known RBP	5.68	□□□□□ -1.5
CMR3	YPR013C	GLY1	P37303	387 aa	Known RBP	5.68	□□□□□ -1.5
CMR3	YPR013C	YEN1	P40028	759 aa		5.68	□□□□□ -1.5
CMR3	YPR013C	AAD14	P42884	376 aa		5.68	□□□□□ -1.5
CMR3	YPR013C	GNP1	P48813	663 aa		5.68	□□□□□ -1.5
CMR3	YPR013C	YGL140C	P53120	1219 aa		5.68	□□□□□ -1.5
CMR3	YPR013C	ERP6	P53198	216 aa		5.68	□□□□□ -1.5
CMR3	YPR013C	DNM1	P54861	757 aa		5.68	□□□□□ -1.5
CMR3	YPR013C	PEX13	P80667	386 aa		5.68	□□□□□ -1.5
CMR3	YPR013C	FMP25	Q08023	583 aa		5.68	□□□□□ -1.5
CMR3	YPR013C	PSH1	Q12161	406 aa		5.68	□□□□□ -1.5
CMR3	YPR013C	TRP2	P00899	507 aa	Known RBP	5.67	□□□□□ -1.5
CMR3	YPR013C	CAN1	P04817	590 aa		5.67	□□□□□ -1.5
CMR3	YPR013C	ARE1	P25628	610 aa		5.67	□□□□□ -1.5
CMR3	YPR013C	DAL1	P32375	460 aa		5.67	□□□□□ -1.5
CMR3	YPR013C	LYP1	P32487	611 aa		5.67	□□□□□ -1.5
CMR3	YPR013C	SLA1	P32790	1244 aa		5.67	□□□□□ -1.5
CMR3	YPR013C	RIM11	P38615	370 aa		5.67	□□□□□ -1.5
CMR3	YPR013C	YIR007W	P40566	764 aa		5.67	□□□□□ -1.5
CMR3	YPR013C	NUP85	P46673	744 aa		5.67	□□□□□ -1.5
CMR3	YPR013C	ITC1	P53125	1264 aa		5.67	□□□□□ -1.5
CMR3	YPR013C	NOG1	Q02892	647 aa	Known RBP	5.67	□□□□□ -1.5
CMR3	YPR013C	EAF1	Q06337	982 aa		5.67	□□□□□ -1.5
CMR3	YPR013C	HDA2	Q06629	674 aa		5.67	□□□□□ -1.5
CMR3	YPR013C	TY1A-BL	Q12266	440 aa		5.67	□□□□□ -1.5
CMR3	YPR013C	SBP1	P10080	294 aa	Known RBP	5.66	□□□□□ -1.5
CMR3	YPR013C	VBA5	P36172	582 aa		5.66	□□□□□ -1.5
CMR3	YPR013C	PBY1	P38254	753 aa		5.66	□□□□□ -1.5
CMR3	YPR013C	APM2	P38700	605 aa		5.66	□□□□□ -1.5
CMR3	YPR013C	SHU2	P38957	223 aa		5.66	□□□□□ -1.5
CMR3	YPR013C	TPM2	P40414	161 aa		5.66	□□□□□ -1.5
CMR3	YPR013C	HUL4	P40985	892 aa		5.66	□□□□□ -1.5
CMR3	YPR013C	ENT3	P47160	408 aa		5.66	□□□□□ -1.5
CMR3	YPR013C	SIW14	P53965	281 aa		5.66	□□□□□ -1.5
CMR3	YPR013C	RGP1	P16664	663 aa		5.65	□□□□□ -1.5
CMR3	YPR013C	NPR1	P22211	790 aa		5.65	□□□□□ -1.5
CMR3	YPR013C	MSH3	P25336	1018 aa		5.65	□□□□□ -1.5
CMR3	YPR013C	MSH2	P25847	964 aa		5.65	□□□□□ -1.5
CMR3	YPR013C	ABD1	P32783	436 aa	Predicted RBP	5.65	□□□□□ -1.5
CMR3	YPR013C	RER2	P35196	286 aa		5.65	□□□□□ -1.5
CMR3	YPR013C	YOL057W	Q08225	711 aa		5.65	□□□□□ -1.5
CMR3	YPR013C	TY1A-DR3	Q12441	440 aa		5.65	□□□□□ -1.5
CMR3	YPR013C	CMR1	Q12510	522 aa	Known RBP	5.65	□□□□□ -1.5
CMR3	YPR013C	PRP5	P21372	849 aa	Predicted RBP	5.64	□□□□□ -1.51
CMR3	YPR013C	SFP1	P32432	683 aa		5.64	□□□□□ -1.51
CMR3	YPR013C	GRX7	P38068	203 aa		5.64	□□□□□ -1.51
CMR3	YPR013C	SEA4	P38164	1038 aa		5.64	□□□□□ -1.51
CMR3	YPR013C	HXT13	P39924	564 aa		5.64	□□□□□ -1.51
CMR3	YPR013C	PFD1	P46988	109 aa		5.64	□□□□□ -1.51
CMR3	YPR013C	VTC4	P47075	721 aa		5.64	□□□□□ -1.51
CMR3	YPR013C	UTP8	P53276	713 aa	Known RBP	5.64	□□□□□ -1.51
CMR3	YPR013C	HXT17	P53631	564 aa		5.64	□□□□□ -1.51
CMR3	YPR013C	YNR029C	P53729	429 aa	Known RBP	5.64	□□□□□ -1.51
CMR3	YPR013C	HXT15	P54854	567 aa		5.64	□□□□□ -1.51
CMR3	YPR013C	YLR225C	Q05948	407 aa	Known RBP	5.64	□□□□□ -1.51
CMR3	YPR013C	ADR1	P07248	1323 aa		5.64	□□□□□ -1.51
CMR3	YPR013C	SWE1	P32944	819 aa		5.63	□□□□□ -1.51
CMR3	YPR013C	YNR040W	P53736	256 aa		5.63	□□□□□ -1.51
CMR3	YPR013C	ESC2	Q06340	456 aa		5.63	□□□□□ -1.51
CMR3	YPR013C	NTG2	Q08214	380 aa		5.63	□□□□□ -1.51
CMR3	YPR013C	HEM13	P11353	328 aa	Known RBP	5.62	□□□□□ -1.51
CMR3	YPR013C	RPL8A	P17076	256 aa	Known RBP	5.62	□□□□□ -1.51
CMR3	YPR013C	PRP9	P19736	530 aa	Known RBP	5.62	□□□□□ -1.51
CMR3	YPR013C	MRC1	P25588	1096 aa		5.62	□□□□□ -1.51
CMR3	YPR013C	DLD1	P32891	587 aa		5.62	□□□□□ -1.51
CMR3	YPR013C	NCL1	P38205	684 aa	Known RBP	5.62	□□□□□ -1.51
CMR3	YPR013C	ZDS1	P50111	915 aa	Known RBP	5.62	□□□□□ -1.51
CMR3	YPR013C	VPS72	Q03388	795 aa		5.62	□□□□□ -1.51
CMR3	YPR013C	TAF8	Q03750	510 aa		5.62	□□□□□ -1.51
CMR3	YPR013C	RSC2	Q06488	889 aa		5.62	□□□□□ -1.51
CMR3	YPR013C	VMA4	P22203	233 aa	Known RBP	5.61	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms