RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C GLO3P38682 493 aaKnown RBP6.04□□□□□ -1.44
CUP9YPL177C MEC3Q02574 474 aa6.04□□□□□ -1.44
CUP9YPL177C GAS1P22146 559 aaKnown RBP6.03□□□□□ -1.44
CUP9YPL177C TSA1P34760 196 aaKnown RBP6.03□□□□□ -1.44
CUP9YPL177C QDR1P40475 563 aa6.03□□□□□ -1.44
CUP9YPL177C CDA2Q06703 312 aa6.03□□□□□ -1.44
CUP9YPL177C RPS4AP0CX35 261 aaKnown RBP6.02□□□□□ -1.45
CUP9YPL177C RPS4BP0CX36 261 aaKnown RBP6.02□□□□□ -1.45
CUP9YPL177C MSH4P40965 878 aaPredicted RBP6.02□□□□□ -1.45
CUP9YPL177C ALT1P52893 592 aa6.02□□□□□ -1.45
CUP9YPL177C PRP43P53131 767 aaKnown RBP6.02□□□□□ -1.45
CUP9YPL177C YCR015CP25616 317 aa6.01□□□□□ -1.45
CUP9YPL177C SSF1P38789 453 aaPredicted RBP6.01□□□□□ -1.45
CUP9YPL177C ERP5P38819 212 aa6.01□□□□□ -1.45
CUP9YPL177C SAP155P43612 1002 aa6.01□□□□□ -1.45
CUP9YPL177C ATG1P53104 897 aa6.01□□□□□ -1.45
CUP9YPL177C UTP22P53254 1237 aaPredicted RBP6.01□□□□□ -1.45
CUP9YPL177C EAR1Q03212 550 aa6.01□□□□□ -1.45
CUP9YPL177C YBL113CQ7M4S9 792 aa6.01□□□□□ -1.45
CUP9YPL177C ORC3P54790 616 aa6□□□□□ -1.45
CUP9YPL177C ALG6Q12001 544 aaKnown RBP6□□□□□ -1.45
CUP9YPL177C MNL2Q12205 849 aa6□□□□□ -1.45
CUP9YPL177C ECM2P38241 364 aaKnown RBP5.99□□□□□ -1.45
CUP9YPL177C REI1P38344 393 aaPredicted RBP5.99□□□□□ -1.45
CUP9YPL177C TRL1P09880 827 aaKnown RBP5.98□□□□□ -1.45
CUP9YPL177C GRS1P38088 690 aaKnown RBP5.98□□□□□ -1.45
CUP9YPL177C NOP8Q08287 484 aaPredicted RBP5.98□□□□□ -1.45
CUP9YPL177C FLP1P03870 423 aa5.97□□□□□ -1.45
CUP9YPL177C TY1A-LR4P0C2I8 440 aaKnown RBP5.97□□□□□ -1.45
CUP9YPL177C TY1A-DR6P0CX70 440 aa5.97□□□□□ -1.45
CUP9YPL177C TY1A-ER1P0CX71 440 aa5.97□□□□□ -1.45
CUP9YPL177C TY1A-LR2P0CX72 440 aa5.97□□□□□ -1.45
CUP9YPL177C TY1A-PLP0CX73 440 aa5.97□□□□□ -1.45
CUP9YPL177C TY1A-JR1P0CX74 440 aa5.97□□□□□ -1.45
CUP9YPL177C TY1A-LR3P0CX75 440 aa5.97□□□□□ -1.45
CUP9YPL177C TY1A-ML2P0CX76 440 aa5.97□□□□□ -1.45
CUP9YPL177C ADP1P25371 1049 aa5.97□□□□□ -1.45
CUP9YPL177C PEX7P39108 375 aa5.97□□□□□ -1.45
CUP9YPL177C ACF4P47129 309 aa5.97□□□□□ -1.45
CUP9YPL177C YNL011CP53980 444 aa5.97□□□□□ -1.45
CUP9YPL177C SSY1Q03770 852 aa5.97□□□□□ -1.45
CUP9YPL177C TRS120Q04183 1289 aa5.97□□□□□ -1.45
CUP9YPL177C BSC2Q05611 235 aa5.97□□□□□ -1.45
CUP9YPL177C ESC8Q08119 714 aa5.97□□□□□ -1.45
CUP9YPL177C TY1A-GR1Q12085 440 aa5.97□□□□□ -1.45
CUP9YPL177C YVC1Q12324 675 aa5.97□□□□□ -1.45
CUP9YPL177C LPX1Q12405 387 aaKnown RBP5.97□□□□□ -1.45
CUP9YPL177C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.97□□□□□ -1.45
CUP9YPL177C TY1A-OLQ92392 440 aaKnown RBP5.97□□□□□ -1.45
CUP9YPL177C TRE1Q08919 783 aa5.96□□□□□ -1.46
CUP9YPL177C SMY2P32909 740 aaKnown RBP5.95□□□□□ -1.46
CUP9YPL177C THI80P35202 319 aa5.95□□□□□ -1.46
CUP9YPL177C YKL222CP35995 705 aa5.95□□□□□ -1.46
CUP9YPL177C MDJ2P42834 146 aa5.95□□□□□ -1.46
CUP9YPL177C NUT1P53114 1132 aa5.95□□□□□ -1.46
CUP9YPL177C YGR045CP53229 120 aa5.95□□□□□ -1.46
CUP9YPL177C YAF9P53930 226 aa5.95□□□□□ -1.46
CUP9YPL177C CDC55Q00362 526 aa5.95□□□□□ -1.46
CUP9YPL177C NFS1P25374 497 aa5.94□□□□□ -1.46
CUP9YPL177C TAF1P46677 1066 aa5.94□□□□□ -1.46
CUP9YPL177C PMT7Q06644 662 aa5.94□□□□□ -1.46
CUP9YPL177C ARL1P38116 183 aaKnown RBP5.93□□□□□ -1.46
CUP9YPL177C ELA1P53861 379 aaPredicted RBP5.93□□□□□ -1.46
CUP9YPL177C PRO1P32264 428 aa5.92□□□□□ -1.46
CUP9YPL177C SEN54Q02825 467 aaPredicted RBP5.92□□□□□ -1.46
CUP9YPL177C SLD2P34252 453 aa5.91□□□□□ -1.46
CUP9YPL177C YHL050CP38721 697 aa5.91□□□□□ -1.46
CUP9YPL177C YHR219WP38900 624 aa5.91□□□□□ -1.46
CUP9YPL177C PRP6P19735 899 aaPredicted RBP5.9□□□□□ -1.46
CUP9YPL177C NNK1P36003 928 aa5.9□□□□□ -1.46
CUP9YPL177C IPL1P38991 367 aa5.9□□□□□ -1.46
CUP9YPL177C STM1P39015 273 aaKnown RBP5.9□□□□□ -1.46
CUP9YPL177C FRT1Q99332 602 aa5.9□□□□□ -1.46
CUP9YPL177C EXO5P38289 585 aa5.89□□□□□ -1.47
CUP9YPL177C GIP4P39732 760 aa5.89□□□□□ -1.47
CUP9YPL177C NUT2Q06213 157 aa5.89□□□□□ -1.47
CUP9YPL177C INP54Q08227 384 aaKnown RBP5.89□□□□□ -1.47
CUP9YPL177C YDL177CQ12257 170 aa5.89□□□□□ -1.47
CUP9YPL177C MCM5P29496 775 aaKnown RBP5.88□□□□□ -1.47
CUP9YPL177C PTC7P38797 343 aa5.88□□□□□ -1.47
CUP9YPL177C MON1P53129 644 aa5.88□□□□□ -1.47
CUP9YPL177C GPI13Q07830 1017 aa5.88□□□□□ -1.47
CUP9YPL177C AVO1Q08236 1176 aa5.88□□□□□ -1.47
CUP9YPL177C PUS7Q08647 676 aaKnown RBP5.88□□□□□ -1.47
CUP9YPL177C FLR1P38124 548 aa5.87□□□□□ -1.47
CUP9YPL177C NEM1P38757 446 aa5.87□□□□□ -1.47
CUP9YPL177C SLS1P42900 643 aa5.87□□□□□ -1.47
CUP9YPL177C MSC6Q08818 692 aaKnown RBP5.87□□□□□ -1.47
CUP9YPL177C RVS167P39743 482 aaKnown RBP5.86□□□□□ -1.47
CUP9YPL177C AIM3P38266 947 aaKnown RBP5.85□□□□□ -1.47
CUP9YPL177C GTS1P40956 396 aa5.85□□□□□ -1.47
CUP9YPL177C TPP1Q03796 238 aa5.85□□□□□ -1.47
CUP9YPL177C YKL077WP36081 392 aa5.84□□□□□ -1.47
CUP9YPL177C MRPL22P53881 309 aa5.84□□□□□ -1.47
CUP9YPL177C WHI5Q12416 295 aa5.84□□□□□ -1.47
CUP9YPL177C SAM35P14693 329 aa5.83□□□□□ -1.48
CUP9YPL177C SEC20P28791 383 aa5.83□□□□□ -1.48
CUP9YPL177C THI12P42883 340 aa5.83□□□□□ -1.48
CUP9YPL177C THI5P43534 340 aa5.83□□□□□ -1.48
CUP9YPL177C THI11P47183 340 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms