RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W TRE1Q08919 783 aa2.99□□□□□ -1.93
SGF11YPL047W ALG6Q12001 544 aaKnown RBP2.99□□□□□ -1.93
SGF11YPL047W FLR1P38124 548 aa2.98□□□□□ -1.93
SGF11YPL047W GLO3P38682 493 aaKnown RBP2.98□□□□□ -1.93
SGF11YPL047W ALT1P52893 592 aa2.98□□□□□ -1.93
SGF11YPL047W UTP22P53254 1237 aaPredicted RBP2.98□□□□□ -1.93
SGF11YPL047W RSC4Q02206 625 aa2.98□□□□□ -1.93
SGF11YPL047W EAR1Q03212 550 aa2.98□□□□□ -1.93
SGF11YPL047W SSY1Q03770 852 aa2.98□□□□□ -1.93
SGF11YPL047W MSH6Q03834 1242 aa2.98□□□□□ -1.93
SGF11YPL047W CMR1Q12510 522 aaKnown RBP2.98□□□□□ -1.93
SGF11YPL047W COBP00163 385 aa2.97□□□□□ -1.93
SGF11YPL047W PRO1P32264 428 aa2.97□□□□□ -1.93
SGF11YPL047W RIM11P38615 370 aa2.97□□□□□ -1.93
SGF11YPL047W KAR5Q04746 504 aa2.97□□□□□ -1.93
SGF11YPL047W AVO1Q08236 1176 aa2.97□□□□□ -1.93
SGF11YPL047W YVC1Q12324 675 aa2.97□□□□□ -1.93
SGF11YPL047W PRP6P19735 899 aaPredicted RBP2.96□□□□□ -1.94
SGF11YPL047W PRP5P21372 849 aaPredicted RBP2.96□□□□□ -1.94
SGF11YPL047W NFS1P25374 497 aa2.96□□□□□ -1.94
SGF11YPL047W SMY2P32909 740 aaKnown RBP2.96□□□□□ -1.94
SGF11YPL047W AIM3P38266 947 aaKnown RBP2.96□□□□□ -1.94
SGF11YPL047W QDR1P40475 563 aa2.96□□□□□ -1.94
SGF11YPL047W ELA1P53861 379 aaPredicted RBP2.96□□□□□ -1.94
SGF11YPL047W ORC3P54790 616 aa2.96□□□□□ -1.94
SGF11YPL047W RPL34AP87262 121 aaPredicted RBP2.96□□□□□ -1.94
SGF11YPL047W LPX1Q12405 387 aaKnown RBP2.96□□□□□ -1.94
SGF11YPL047W DUR3P33413 735 aa2.95□□□□□ -1.94
SGF11YPL047W NNK1P36003 928 aa2.95□□□□□ -1.94
SGF11YPL047W PTC7P38797 343 aa2.95□□□□□ -1.94
SGF11YPL047W PEX7P39108 375 aa2.95□□□□□ -1.94
SGF11YPL047W YGR045CP53229 120 aa2.95□□□□□ -1.94
SGF11YPL047W YNL011CP53980 444 aa2.95□□□□□ -1.94
SGF11YPL047W GIS1Q03833 894 aa2.95□□□□□ -1.94
SGF11YPL047W BSC2Q05611 235 aa2.95□□□□□ -1.94
SGF11YPL047W HDA2Q06629 674 aa2.95□□□□□ -1.94
SGF11YPL047W PMT7Q06644 662 aa2.95□□□□□ -1.94
SGF11YPL047W MCM5P29496 775 aaKnown RBP2.94□□□□□ -1.94
SGF11YPL047W ARL1P38116 183 aaKnown RBP2.94□□□□□ -1.94
SGF11YPL047W SUB2Q07478 446 aaKnown RBP2.94□□□□□ -1.94
SGF11YPL047W YDL177CQ12257 170 aa2.94□□□□□ -1.94
SGF11YPL047W FLP1P03870 423 aa2.93□□□□□ -1.94
SGF11YPL047W YKL077WP36081 392 aa2.93□□□□□ -1.94
SGF11YPL047W GTS1P40956 396 aa2.93□□□□□ -1.94
SGF11YPL047W SAP155P43612 1002 aa2.93□□□□□ -1.94
SGF11YPL047W ACF4P47129 309 aa2.93□□□□□ -1.94
SGF11YPL047W ATG1P53104 897 aa2.93□□□□□ -1.94
SGF11YPL047W NUT1P53114 1132 aa2.93□□□□□ -1.94
SGF11YPL047W MRPL22P53881 309 aa2.93□□□□□ -1.94
SGF11YPL047W YAF9P53930 226 aa2.93□□□□□ -1.94
SGF11YPL047W TRS120Q04183 1289 aa2.93□□□□□ -1.94
SGF11YPL047W SHU2P38957 223 aa2.92□□□□□ -1.94
SGF11YPL047W RVS167P39743 482 aaKnown RBP2.92□□□□□ -1.94
SGF11YPL047W FOL2P51601 243 aaKnown RBP2.92□□□□□ -1.94
SGF11YPL047W CDC55Q00362 526 aa2.92□□□□□ -1.94
SGF11YPL047W TPP1Q03796 238 aa2.92□□□□□ -1.94
SGF11YPL047W PUS7Q08647 676 aaKnown RBP2.92□□□□□ -1.94
SGF11YPL047W TY1A-LR4P0C2I8 440 aaKnown RBP2.91□□□□□ -1.94
SGF11YPL047W TY1A-DR6P0CX70 440 aa2.91□□□□□ -1.94
SGF11YPL047W TY1A-ER1P0CX71 440 aa2.91□□□□□ -1.94
SGF11YPL047W TY1A-LR2P0CX72 440 aa2.91□□□□□ -1.94
SGF11YPL047W TY1A-PLP0CX73 440 aa2.91□□□□□ -1.94
SGF11YPL047W TY1A-JR1P0CX74 440 aa2.91□□□□□ -1.94
SGF11YPL047W TY1A-LR3P0CX75 440 aa2.91□□□□□ -1.94
SGF11YPL047W TY1A-ML2P0CX76 440 aa2.91□□□□□ -1.94
SGF11YPL047W ETP1P38748 585 aaKnown RBP2.91□□□□□ -1.94
SGF11YPL047W RIM8P53179 542 aa2.91□□□□□ -1.94
SGF11YPL047W INP54Q08227 384 aaKnown RBP2.91□□□□□ -1.94
SGF11YPL047W TY1A-GR1Q12085 440 aa2.91□□□□□ -1.94
SGF11YPL047W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.91□□□□□ -1.94
SGF11YPL047W TY1A-OLQ92392 440 aaKnown RBP2.91□□□□□ -1.94
SGF11YPL047W ATG14P38270 344 aa2.9□□□□□ -1.95
SGF11YPL047W YHL012WP38709 493 aa2.9□□□□□ -1.95
SGF11YPL047W HSE1P38753 452 aa2.9□□□□□ -1.95
SGF11YPL047W MON1P53129 644 aa2.9□□□□□ -1.95
SGF11YPL047W RET1P22276 1149 aaKnown RBP2.89□□□□□ -1.95
SGF11YPL047W TOD6P34219 525 aa2.89□□□□□ -1.95
SGF11YPL047W YAR028WP39548 234 aa2.89□□□□□ -1.95
SGF11YPL047W SLS1P42900 643 aa2.89□□□□□ -1.95
SGF11YPL047W MTR4P47047 1073 aaKnown RBP2.89□□□□□ -1.95
SGF11YPL047W YPL277CQ08989 487 aa2.89□□□□□ -1.95
SGF11YPL047W LAP2Q10740 671 aa2.89□□□□□ -1.95
SGF11YPL047W MNL2Q12205 849 aa2.89□□□□□ -1.95
SGF11YPL047W SOD2P00447 233 aa2.88□□□□□ -1.95
SGF11YPL047W RPS13P05756 151 aaKnown RBP2.88□□□□□ -1.95
SGF11YPL047W EXO5P38289 585 aa2.88□□□□□ -1.95
SGF11YPL047W NMD3P38861 518 aaKnown RBP2.88□□□□□ -1.95
SGF11YPL047W SNO2P53823 222 aa2.88□□□□□ -1.95
SGF11YPL047W YLR257WQ06146 321 aaKnown RBP2.88□□□□□ -1.95
SGF11YPL047W NOC3Q07896 663 aaPredicted RBP2.88□□□□□ -1.95
SGF11YPL047W AIM26P32858 118 aa2.87□□□□□ -1.95
SGF11YPL047W MDL2P33311 773 aa2.87□□□□□ -1.95
SGF11YPL047W SAM37P50110 327 aa2.87□□□□□ -1.95
SGF11YPL047W HRK1Q08732 759 aaKnown RBP2.87□□□□□ -1.95
SGF11YPL047W YOR352WQ08816 343 aa2.87□□□□□ -1.95
SGF11YPL047W RLF2Q12495 606 aa2.87□□□□□ -1.95
SGF11YPL047W SAM35P14693 329 aa2.86□□□□□ -1.95
SGF11YPL047W ABZ1P37254 787 aaPredicted RBP2.86□□□□□ -1.95
SGF11YPL047W GRS1P38088 690 aaKnown RBP2.86□□□□□ -1.95
SGF11YPL047W NEM1P38757 446 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms