RNA–Protein interactions for RNA: YMR287C

DSS1, Transcript of 3'-5' exoribonuclease, yeast

Gene DSS1, Length 2,910 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSS1	YMR287C	PEP7	P32609	515 aa		5.27	□□□□□ -1.57
DSS1	YMR287C	SIW14	P53965	281 aa		5.27	□□□□□ -1.57
DSS1	YMR287C	TY1A-MR1	Q04215	440 aa		5.27	□□□□□ -1.57
DSS1	YMR287C	HTS1	P07263	546 aa	Known RBP	5.27	□□□□□ -1.57
DSS1	YMR287C	DIT1	P21623	536 aa		5.27	□□□□□ -1.57
DSS1	YMR287C	PRK1	P40494	810 aa		5.27	□□□□□ -1.57
DSS1	YMR287C	XKS1	P42826	600 aa		5.27	□□□□□ -1.57
DSS1	YMR287C	ALG12	P53730	551 aa		5.27	□□□□□ -1.57
DSS1	YMR287C	CUZ1	P53899	274 aa		5.27	□□□□□ -1.57
DSS1	YMR287C	TAF13	P11747	167 aa		5.26	□□□□□ -1.57
DSS1	YMR287C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected
DSS1	YMR287C	PEX28	P38848	579 aa		5.26	□□□□□ -1.57
DSS1	YMR287C	LYS5	P50113	272 aa		5.26	□□□□□ -1.57
DSS1	YMR287C	HUL5	P53119	910 aa		5.26	□□□□□ -1.57
DSS1	YMR287C	NCE103	P53615	221 aa		5.26	□□□□□ -1.57
DSS1	YMR287C	UBP2	Q01476	1272 aa		5.26	□□□□□ -1.57
DSS1	YMR287C	TRP2	P00899	507 aa	Known RBP	5.26	□□□□□ -1.57
DSS1	YMR287C	TY1A-DR2	Q03964	440 aa	Known RBP	5.26	□□□□□ -1.57
DSS1	YMR287C	YDR461C-A	Q2V2P7	80 aa		5.26	□□□□□ -1.57
DSS1	YMR287C	KAR2	P16474	682 aa	Known RBP	5.25	□□□□□ -1.57
DSS1	YMR287C	SYT1	Q06836	1226 aa		5.25	□□□□□ -1.57
DSS1	YMR287C	AFG2	P32794	780 aa		5.25	□□□□□ -1.57
DSS1	YMR287C	NCL1	P38205	684 aa	Known RBP	5.25	□□□□□ -1.57
DSS1	YMR287C	HEH2	Q03281	663 aa		5.25	□□□□□ -1.57
DSS1	YMR287C	YIG1	Q08956	461 aa		5.25	□□□□□ -1.57
DSS1	YMR287C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.24	□□□□□ -1.57	not detected
DSS1	YMR287C	VMA4	P22203	233 aa	Known RBP	5.24	□□□□□ -1.57
DSS1	YMR287C	ROG3	P43602	733 aa		5.24	□□□□□ -1.57
DSS1	YMR287C	ENT3	P47160	408 aa		5.24	□□□□□ -1.57
DSS1	YMR287C	MAL11	P53048	616 aa		5.24	□□□□□ -1.57
DSS1	YMR287C	MKK2	P32491	506 aa		5.24	□□□□□ -1.57
DSS1	YMR287C	ACO2	P39533	789 aa		5.24	□□□□□ -1.57
DSS1	YMR287C	SHE9	Q04172	456 aa		5.24	□□□□□ -1.57
DSS1	YMR287C	PRI2	P20457	528 aa		5.23	□□□□□ -1.57
DSS1	YMR287C	AGP1	P25376	633 aa		5.23	□□□□□ -1.57
DSS1	YMR287C	RRP14	P36080	434 aa	Known RBP	5.23	□□□□□ -1.57
DSS1	YMR287C	BRN1	P38170	754 aa		5.23	□□□□□ -1.57
DSS1	YMR287C	NEM1	P38757	446 aa		5.23	□□□□□ -1.57
DSS1	YMR287C	TRK1	P12685	1235 aa		5.23	□□□□□ -1.57
DSS1	YMR287C	YBR287W	P38355	427 aa		5.23	□□□□□ -1.57
DSS1	YMR287C	LSB6	P42951	607 aa		5.23	□□□□□ -1.57
DSS1	YMR287C	TYW3	P53177	273 aa		5.23	□□□□□ -1.57
DSS1	YMR287C	HAS1	Q03532	505 aa	Known RBP	5.23	□□□□□ -1.57
DSS1	YMR287C	WRS1	Q12109	432 aa	Known RBP	5.23	□□□□□ -1.57
DSS1	YMR287C	LCB5	Q06147	687 aa	Known RBP	5.22	□□□□□ -1.57
DSS1	YMR287C	YDL176W	Q12027	708 aa		5.22	□□□□□ -1.57
DSS1	YMR287C	SRF1	Q12516	437 aa		5.22	□□□□□ -1.57
DSS1	YMR287C	UTP5	Q04177	643 aa	Known RBP	5.22	□□□□□ -1.57
DSS1	YMR287C	RAD4	P14736	754 aa		5.21	□□□□□ -1.57
DSS1	YMR287C	SRP40	P32583	406 aa	Predicted RBP	5.21	□□□□□ -1.57
DSS1	YMR287C	ROD1	Q02805	837 aa		5.21	□□□□□ -1.57
DSS1	YMR287C	ATG36	P46983	293 aa		5.21	□□□□□ -1.58
DSS1	YMR287C	TIF35	Q04067	274 aa	Known RBP	5.21	□□□□□ -1.58
DSS1	YMR287C	MRL1	Q06815	381 aa		5.21	□□□□□ -1.58
DSS1	YMR287C	MPH1	P40562	993 aa		5.2	□□□□□ -1.58
DSS1	YMR287C	TMA46	Q12000	345 aa	Known RBP	5.2	□□□□□ -1.58
DSS1	YMR287C	RPL8B	P29453	256 aa	Known RBP	5.2	□□□□□ -1.58
DSS1	YMR287C	MET22	P32179	357 aa		5.2	□□□□□ -1.58
DSS1	YMR287C	TIM23	P32897	222 aa		5.2	□□□□□ -1.58
DSS1	YMR287C	YKL091C	P33324	310 aa	Known RBP	5.2	□□□□□ -1.58
DSS1	YMR287C	YBR184W	P38299	523 aa		5.2	□□□□□ -1.58
DSS1	YMR287C	BRE2	P43132	505 aa		5.2	□□□□□ -1.58
DSS1	YMR287C	FLC1	Q08967	793 aa		5.2	□□□□□ -1.58
DSS1	YMR287C	VBA5	P36172	582 aa		5.2	□□□□□ -1.58
DSS1	YMR287C	POL5	P39985	1022 aa	Known RBP	5.2	□□□□□ -1.58
DSS1	YMR287C	SIP5	P40210	489 aa	Known RBP	5.2	□□□□□ -1.58
DSS1	YMR287C	RAT1	Q02792	1006 aa	Known RBP	5.2	□□□□□ -1.58
DSS1	YMR287C	TAF8	Q03750	510 aa		5.2	□□□□□ -1.58
DSS1	YMR287C	CDC53	Q12018	815 aa	Known RBP	5.2	□□□□□ -1.58
DSS1	YMR287C	SLS1	P42900	643 aa		5.19	□□□□□ -1.58
DSS1	YMR287C	ABD1	P32783	436 aa	Predicted RBP	5.19	□□□□□ -1.58
DSS1	YMR287C	RSP5	P39940	809 aa	Known RBP	5.19	□□□□□ -1.58
DSS1	YMR287C	PEX13	P80667	386 aa		5.19	□□□□□ -1.58
DSS1	YMR287C	BET3	P36149	193 aa		5.18	□□□□□ -1.58
DSS1	YMR287C	YIR007W	P40566	764 aa		5.18	□□□□□ -1.58
DSS1	YMR287C	TDA5	Q06417	326 aa	Known RBP	5.18	□□□□□ -1.58
DSS1	YMR287C	CAN1	P04817	590 aa		5.18	□□□□□ -1.58
DSS1	YMR287C	NAR1	P23503	491 aa	Known RBP	5.18	□□□□□ -1.58
DSS1	YMR287C	GUP1	P53154	560 aa		5.18	□□□□□ -1.58
DSS1	YMR287C	SCW11	P53189	542 aa		5.18	□□□□□ -1.58
DSS1	YMR287C	BUL2	Q03758	920 aa	Known RBP	5.18	□□□□□ -1.58
DSS1	YMR287C	SPO71	Q03868	1245 aa		5.18	□□□□□ -1.58
DSS1	YMR287C	RSC2	Q06488	889 aa		5.18	□□□□□ -1.58
DSS1	YMR287C	FMP25	Q08023	583 aa		5.18	□□□□□ -1.58
DSS1	YMR287C	ERR1	P0CX10	437 aa		5.17	□□□□□ -1.58
DSS1	YMR287C	ERR2	P0CX11	437 aa		5.17	□□□□□ -1.58
DSS1	YMR287C	LYP1	P32487	611 aa		5.17	□□□□□ -1.58
DSS1	YMR287C	HBS1	P32769	611 aa	Known RBP	5.17	□□□□□ -1.58
DSS1	YMR287C	NAN1	Q02931	896 aa	Known RBP	5.17	□□□□□ -1.58
DSS1	YMR287C	IRR1	P40541	1150 aa		5.17	□□□□□ -1.58
DSS1	YMR287C	RSM26	P47141	266 aa		5.17	□□□□□ -1.58
DSS1	YMR287C	YLR225C	Q05948	407 aa	Known RBP	5.17	□□□□□ -1.58
DSS1	YMR287C	RPP1A	P05318	106 aa	Predicted RBP	5.17	□□□□□ -1.58
DSS1	YMR287C	SBA1	P28707	216 aa	Known RBP	5.17	□□□□□ -1.58
DSS1	YMR287C	NUP82	P40368	713 aa		5.17	□□□□□ -1.58
DSS1	YMR287C	YJL181W	P46987	611 aa		5.17	□□□□□ -1.58
DSS1	YMR287C	AFR1	P33304	620 aa		5.16	□□□□□ -1.58
DSS1	YMR287C	RTA1	P53047	317 aa		5.16	□□□□□ -1.58
DSS1	YMR287C	GIS4	Q04233	774 aa		5.16	□□□□□ -1.58
DSS1	YMR287C	ARL1	P38116	183 aa	Known RBP	5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms