RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C MRPS18P42847 217 aa7.99□□□□□ -1.13
PEX12YMR026C SNU71P53207 620 aaKnown RBP7.99□□□□□ -1.13
PEX12YMR026C UTP22P53254 1237 aaPredicted RBP7.99□□□□□ -1.13
PEX12YMR026C YDR215CQ12240 137 aa7.99□□□□□ -1.13
PEX12YMR026C YPR053CQ6Q5F3 151 aa7.99□□□□□ -1.13
PEX12YMR026C YCK2P23292 546 aaKnown RBP7.98□□□□□ -1.13
PEX12YMR026C YKL077WP36081 392 aa7.98□□□□□ -1.13
PEX12YMR026C PRY1P47032 299 aa7.98□□□□□ -1.13
PEX12YMR026C RSM26P47141 266 aa7.98□□□□□ -1.13
PEX12YMR026C MCD1Q12158 566 aa7.98□□□□□ -1.13
PEX12YMR026C SFA1P32771 386 aa7.97□□□□□ -1.13
PEX12YMR026C SQT1P35184 431 aa7.97□□□□□ -1.13
PEX12YMR026C SLN1P39928 1220 aaPredicted RBP7.97□□□□□ -1.13
PEX12YMR026C FAR11P53917 953 aa7.97□□□□□ -1.13
PEX12YMR026C PUS1Q12211 544 aaKnown RBP7.97□□□□□ -1.13
PEX12YMR026C TY1A-NL1Q12391 440 aaKnown RBP7.97□□□□□ -1.13
PEX12YMR026C ERS1P17261 260 aa7.96□□□□□ -1.14
PEX12YMR026C PRE9P23638 258 aaKnown RBP7.96□□□□□ -1.14
PEX12YMR026C EXO5P38289 585 aa7.96□□□□□ -1.14
PEX12YMR026C GCV1P48015 400 aa7.96□□□□□ -1.14
PEX12YMR026C PEX13P80667 386 aa7.96□□□□□ -1.14
PEX12YMR026C AI3P03877 415 aa7.95□□□□□ -1.14
PEX12YMR026C TY1A-LR4P0C2I8 440 aaKnown RBP7.95□□□□□ -1.14
PEX12YMR026C TY1A-DR6P0CX70 440 aa7.95□□□□□ -1.14
PEX12YMR026C TY1A-ER1P0CX71 440 aa7.95□□□□□ -1.14
PEX12YMR026C TY1A-LR2P0CX72 440 aa7.95□□□□□ -1.14
PEX12YMR026C TY1A-PLP0CX73 440 aa7.95□□□□□ -1.14
PEX12YMR026C TY1A-JR1P0CX74 440 aa7.95□□□□□ -1.14
PEX12YMR026C TY1A-LR3P0CX75 440 aa7.95□□□□□ -1.14
PEX12YMR026C TY1A-ML2P0CX76 440 aa7.95□□□□□ -1.14
PEX12YMR026C MSH3P25336 1018 aa7.95□□□□□ -1.14
PEX12YMR026C PEP7P32609 515 aa7.95□□□□□ -1.14
PEX12YMR026C PEX28P38848 579 aa7.95□□□□□ -1.14
PEX12YMR026C SKN7P38889 622 aa7.95□□□□□ -1.14
PEX12YMR026C PIC2P40035 300 aa7.95□□□□□ -1.14
PEX12YMR026C MEC3Q02574 474 aa7.95□□□□□ -1.14
PEX12YMR026C TY1A-GR1Q12085 440 aa7.95□□□□□ -1.14
PEX12YMR026C TY1A-PR3Q6Q5H1 440 aaKnown RBP7.95□□□□□ -1.14
PEX12YMR026C TY1A-OLQ92392 440 aaKnown RBP7.95□□□□□ -1.14
PEX12YMR026C RMD1Q03441 430 aa7.94□□□□□ -1.14
PEX12YMR026C YMR074CQ04773 145 aa7.94□□□□□ -1.14
PEX12YMR026C ESF1Q06344 628 aaKnown RBP7.94□□□□□ -1.14
PEX12YMR026C YLL054CQ12244 843 aa7.94□□□□□ -1.14
PEX12YMR026C KIP3P53086 805 aaKnown RBP7.93□□□□□ -1.14
PEX12YMR026C RSC6P25632 483 aa7.92□□□□□ -1.14
PEX12YMR026C TAT1P38085 619 aa7.92□□□□□ -1.14
PEX12YMR026C ARL1P38116 183 aaKnown RBP7.92□□□□□ -1.14
PEX12YMR026C YGL140CP53120 1219 aa7.92□□□□□ -1.14
PEX12YMR026C REI1P38344 393 aaPredicted RBP7.91□□□□□ -1.14
PEX12YMR026C NEM1P38757 446 aa7.91□□□□□ -1.14
PEX12YMR026C SLS1P42900 643 aa7.91□□□□□ -1.14
PEX12YMR026C ARI1P53111 347 aaKnown RBP7.91□□□□□ -1.14
PEX12YMR026C NCE103P53615 221 aa7.91□□□□□ -1.14
PEX12YMR026C SEC23P15303 768 aaKnown RBP7.89□□□□□ -1.15
PEX12YMR026C VMA4P22203 233 aaKnown RBP7.89□□□□□ -1.15
PEX12YMR026C RDH54P38086 958 aa7.89□□□□□ -1.15
PEX12YMR026C YOR223WQ12015 292 aa7.89□□□□□ -1.15
PEX12YMR026C HEM13P11353 328 aaKnown RBP7.88□□□□□ -1.15
PEX12YMR026C MTR4P47047 1073 aaKnown RBP7.88□□□□□ -1.15
PEX12YMR026C SVF1Q05515 481 aa7.88□□□□□ -1.15
PEX12YMR026C ALG6Q12001 544 aaKnown RBP7.88□□□□□ -1.15
PEX12YMR026C REC8Q12188 680 aa7.88□□□□□ -1.15
PEX12YMR026C PAM1P37304 830 aaKnown RBP7.87□□□□□ -1.15
PEX12YMR026C UTP5Q04177 643 aaKnown RBP7.87□□□□□ -1.15
PEX12YMR026C MCA1Q08601 432 aa7.87□□□□□ -1.15
PEX12YMR026C XKS1P42826 600 aa7.86□□□□□ -1.15
PEX12YMR026C DOT1Q04089 582 aaKnown RBP7.86□□□□□ -1.15
PEX12YMR026C RGA2Q06407 1009 aa7.86□□□□□ -1.15
PEX12YMR026C TAF13P11747 167 aa7.85□□□□□ -1.15
PEX12YMR026C CCT8P47079 568 aaKnown RBP7.85□□□□□ -1.15
PEX12YMR026C YPL034WQ03083 165 aa7.85□□□□□ -1.15
PEX12YMR026C GCR1P07261 785 aa7.84□□□□□ -1.15
PEX12YMR026C YGR045CP53229 120 aa7.84□□□□□ -1.15
PEX12YMR026C AVO1Q08236 1176 aa7.84□□□□□ -1.15
PEX12YMR026C SCP160P06105 1222 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
PEX12YMR026C PET112P33893 541 aa7.83□□□□□ -1.16
PEX12YMR026C GPT2P36148 743 aa7.83□□□□□ -1.16
PEX12YMR026C SPO74P45819 413 aa7.83□□□□□ -1.16
PEX12YMR026C MTC5Q03897 1148 aa7.83□□□□□ -1.16
PEX12YMR026C HDA2Q06629 674 aa7.83□□□□□ -1.16
PEX12YMR026C NAP1P25293 417 aaKnown RBP7.82□□□□□ -1.16
PEX12YMR026C ADD66P36040 267 aa7.82□□□□□ -1.16
PEX12YMR026C EST2Q06163 884 aa7.82□□□□□ -1.16
PEX12YMR026C NAM7P30771 971 aaKnown RBP7.81□□□□□ -1.16
PEX12YMR026C PGM1P33401 570 aaKnown RBP7.81□□□□□ -1.16
PEX12YMR026C MNR2P35724 969 aa7.81□□□□□ -1.16
PEX12YMR026C ELA1P53861 379 aaPredicted RBP7.81□□□□□ -1.16
PEX12YMR026C JIP5Q06214 492 aaPredicted RBP7.81□□□□□ -1.16
PEX12YMR026C MRL1Q06815 381 aa7.81□□□□□ -1.16
PEX12YMR026C ATG14P38270 344 aa7.8□□□□□ -1.16
PEX12YMR026C YAR028WP39548 234 aa7.8□□□□□ -1.16
PEX12YMR026C LSB3P43603 459 aaKnown RBP7.8□□□□□ -1.16
PEX12YMR026C GNP1P48813 663 aa7.8□□□□□ -1.16
PEX12YMR026C NOP7P53261 605 aaKnown RBP7.8□□□□□ -1.16
PEX12YMR026C GIC2Q06648 383 aa7.8□□□□□ -1.16
PEX12YMR026C AKR1P39010 764 aa7.79□□□□□ -1.16
PEX12YMR026C YNR063WP53749 607 aa7.79□□□□□ -1.16
PEX12YMR026C RKM2Q03942 479 aa7.79□□□□□ -1.16
PEX12YMR026C RTT10Q08924 1013 aa7.79□□□□□ -1.16
PEX12YMR026C MSH4P40965 878 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms