RNA–Protein interactions for RNA: YMR013C

SEC59, Transcript of Dolichol kinase, yeast

Gene SEC59, Length 1,560 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC59	YMR013C	SLA1	P32790	1244 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	CEM1	P39525	442 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	EEB1	Q02891	456 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	MSH6	Q03834	1242 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	TY1A-DR3	Q12441	440 aa		4.91	□□□□□ -1.62
SEC59	YMR013C	PDC6	P26263	563 aa	Known RBP	4.9	□□□□□ -1.63
SEC59	YMR013C	YHR020W	P38708	688 aa	Known RBP	4.9	□□□□□ -1.63
SEC59	YMR013C	XKS1	P42826	600 aa		4.9	□□□□□ -1.63
SEC59	YMR013C	RSM26	P47141	266 aa		4.9	□□□□□ -1.63
SEC59	YMR013C	CUS1	Q02554	436 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC59	YMR013C	YMR265C	Q03508	461 aa	Known RBP	4.9	□□□□□ -1.63
SEC59	YMR013C	MTC5	Q03897	1148 aa		4.9	□□□□□ -1.63
SEC59	YMR013C	PSH1	Q12161	406 aa		4.9	□□□□□ -1.63
SEC59	YMR013C	SQT1	P35184	431 aa		4.89	□□□□□ -1.63
SEC59	YMR013C	RVS167	P39743	482 aa	Known RBP	4.89	□□□□□ -1.63
SEC59	YMR013C	FLC1	Q08967	793 aa		4.89	□□□□□ -1.63
SEC59	YMR013C	TMA46	Q12000	345 aa	Known RBP	4.89	□□□□□ -1.63
SEC59	YMR013C	YLR125W	Q12138	136 aa		4.89	□□□□□ -1.63
SEC59	YMR013C	LEU1	P07264	779 aa	Known RBP	4.88	□□□□□ -1.63
SEC59	YMR013C	SSB1	P11484	613 aa	Known RBP	4.88	□□□□□ -1.63
SEC59	YMR013C	RAD27	P26793	382 aa		4.88	□□□□□ -1.63
SEC59	YMR013C	GRX4	P32642	244 aa		4.88	□□□□□ -1.63
SEC59	YMR013C	YBR184W	P38299	523 aa		4.88	□□□□□ -1.63
SEC59	YMR013C	RSP5	P39940	809 aa	Known RBP	4.88	□□□□□ -1.63
SEC59	YMR013C	CHZ1	P40019	153 aa	Predicted RBP	4.88	□□□□□ -1.63
SEC59	YMR013C	SSB2	P40150	613 aa	Known RBP	4.88	□□□□□ -1.63
SEC59	YMR013C	YIL165C	P40446	119 aa		4.88	□□□□□ -1.63
SEC59	YMR013C	GNP1	P48813	663 aa		4.88	□□□□□ -1.63
SEC59	YMR013C	ERR1	P0CX10	437 aa		4.87	□□□□□ -1.63
SEC59	YMR013C	ERR2	P0CX11	437 aa		4.87	□□□□□ -1.63
SEC59	YMR013C	DIT1	P21623	536 aa		4.87	□□□□□ -1.63
SEC59	YMR013C	MSH4	P40965	878 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC59	YMR013C	SAP155	P43612	1002 aa		4.87	□□□□□ -1.63
SEC59	YMR013C	ITC1	P53125	1264 aa		4.87	□□□□□ -1.63
SEC59	YMR013C	YGR125W	P53273	1036 aa		4.87	□□□□□ -1.63
SEC59	YMR013C	KRE33	P53914	1056 aa	Known RBP	4.87	□□□□□ -1.63
SEC59	YMR013C	UTP14	Q04500	899 aa	Known RBP	4.87	□□□□□ -1.63
SEC59	YMR013C	PMT7	Q06644	662 aa		4.87	□□□□□ -1.63
SEC59	YMR013C	GAL11	P19659	1081 aa		4.87	□□□□□ -1.63
SEC59	YMR013C	THI4	P32318	326 aa		4.87	□□□□□ -1.63
SEC59	YMR013C	STE5	P32917	917 aa		4.87	□□□□□ -1.63
SEC59	YMR013C	PEX28	P38848	579 aa		4.87	□□□□□ -1.63
SEC59	YMR013C	SKP1	P52286	194 aa		4.87	□□□□□ -1.63
SEC59	YMR013C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SEC59	YMR013C	NUG1	P40010	520 aa	Known RBP	4.86	□□□□□ -1.63
SEC59	YMR013C	YGL140C	P53120	1219 aa		4.86	□□□□□ -1.63
SEC59	YMR013C	YGL081W	P53156	320 aa		4.86	□□□□□ -1.63
SEC59	YMR013C	PEX13	P80667	386 aa		4.86	□□□□□ -1.63
SEC59	YMR013C	ESC2	Q06340	456 aa		4.86	□□□□□ -1.63
SEC59	YMR013C	HDA2	Q06629	674 aa		4.86	□□□□□ -1.63
SEC59	YMR013C	SPO75	Q07798	868 aa		4.86	□□□□□ -1.63
SEC59	YMR013C	OSH2	Q12451	1283 aa		4.86	□□□□□ -1.63
SEC59	YMR013C	TRP2	P00899	507 aa	Known RBP	4.85	□□□□□ -1.63
SEC59	YMR013C	SEC23	P15303	768 aa	Known RBP	4.85	□□□□□ -1.63
SEC59	YMR013C	RGP1	P16664	663 aa		4.85	□□□□□ -1.63
SEC59	YMR013C	RPL8B	P29453	256 aa	Known RBP	4.85	□□□□□ -1.63
SEC59	YMR013C	ABD1	P32783	436 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC59	YMR013C	MDJ1	P35191	511 aa		4.85	□□□□□ -1.63
SEC59	YMR013C	RIM11	P38615	370 aa		4.85	□□□□□ -1.63
SEC59	YMR013C	ICP55	P40051	511 aa		4.85	□□□□□ -1.63
SEC59	YMR013C	ADE12	P80210	433 aa	Known RBP	4.85	□□□□□ -1.63
SEC59	YMR013C	SYT1	Q06836	1226 aa		4.85	□□□□□ -1.63
SEC59	YMR013C	PUS1	Q12211	544 aa	Known RBP	4.85	□□□□□ -1.63
SEC59	YMR013C	CIT1	P00890	479 aa		4.84	□□□□□ -1.63
SEC59	YMR013C	HSP60	P19882	572 aa	Known RBP	4.84	□□□□□ -1.63
SEC59	YMR013C	SRM1	P21827	482 aa		4.84	□□□□□ -1.63
SEC59	YMR013C	AGP1	P25376	633 aa		4.84	□□□□□ -1.63
SEC59	YMR013C	APM2	P38700	605 aa		4.84	□□□□□ -1.63
SEC59	YMR013C	UBP12	P39538	1254 aa		4.84	□□□□□ -1.63
SEC59	YMR013C	YNR040W	P53736	256 aa		4.84	□□□□□ -1.63
SEC59	YMR013C	SPO20	Q04359	397 aa		4.84	□□□□□ -1.63
SEC59	YMR013C	FMP25	Q08023	583 aa		4.84	□□□□□ -1.63
SEC59	YMR013C	PHM7	Q12252	991 aa		4.84	□□□□□ -1.63
SEC59	YMR013C	CMR1	Q12510	522 aa	Known RBP	4.84	□□□□□ -1.63
SEC59	YMR013C	LYP1	P32487	611 aa		4.83	□□□□□ -1.64
SEC59	YMR013C	RER2	P35196	286 aa		4.83	□□□□□ -1.64
SEC59	YMR013C	MRP8	P35719	219 aa		4.83	□□□□□ -1.64
SEC59	YMR013C	VBA5	P36172	582 aa		4.83	□□□□□ -1.64
SEC59	YMR013C	SEA4	P38164	1038 aa		4.83	□□□□□ -1.64
SEC59	YMR013C	KRI1	P42846	591 aa	Known RBP	4.83	□□□□□ -1.64
SEC59	YMR013C	NSG2	P53898	299 aa		4.83	□□□□□ -1.64
SEC59	YMR013C	THI72	Q08579	599 aa		4.83	□□□□□ -1.64
SEC59	YMR013C	AI1	P03875	834 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	CAN1	P04817	590 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	HEM13	P11353	328 aa	Known RBP	4.82	□□□□□ -1.64
SEC59	YMR013C	TAF13	P11747	167 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	NPR1	P22211	790 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	MSH3	P25336	1018 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	SBA1	P28707	216 aa	Known RBP	4.82	□□□□□ -1.64
SEC59	YMR013C	GGA2	P38817	585 aa	Known RBP	4.82	□□□□□ -1.64
SEC59	YMR013C	HXT13	P39924	564 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	YEN1	P40028	759 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	PPT1	P53043	513 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	HXT17	P53631	564 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	SIW14	P53965	281 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	HXT15	P54854	567 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	DNM1	P54861	757 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	NOG1	Q02892	647 aa	Known RBP	4.82	□□□□□ -1.64
SEC59	YMR013C	SHE9	Q04172	456 aa		4.82	□□□□□ -1.64
SEC59	YMR013C	YLR225C	Q05948	407 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms