RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN1	YLR430W	DUR3	P33413	735 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	PIH1	P38768	344 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	CKB1	P43639	278 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	SDH5	Q08230	162 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	SSZ1	P38788	538 aa	Known RBP	4.58	□□□□□ -1.68
SEN1	YLR430W	TDA11	P38854	504 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	HOS2	P53096	452 aa	Predicted RBP	4.58	□□□□□ -1.68
SEN1	YLR430W	YNL144C	P53907	740 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	LAM5	P43560	674 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	ARI1	P53111	347 aa	Known RBP	4.58	□□□□□ -1.68
SEN1	YLR430W	HOP2	P53187	214 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	APC2	Q12440	853 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	CPS1	P27614	576 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	YNG2	P38806	282 aa	Known RBP	4.58	□□□□□ -1.68
SEN1	YLR430W	MRX1	P40050	688 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	SDA1	P53313	767 aa	Known RBP	4.58	□□□□□ -1.68
SEN1	YLR430W	CWC15	Q03772	175 aa	Known RBP	4.58	□□□□□ -1.68
SEN1	YLR430W	LTE1	P07866	1435 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	ADE2	P21264	571 aa	Known RBP	4.58	□□□□□ -1.68
SEN1	YLR430W	PRD1	P25375	712 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	GYP7	P48365	746 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	VAM6	Q07468	1049 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	YOR223W	Q12015	292 aa		4.58	□□□□□ -1.68
SEN1	YLR430W	DDP1	Q99321	188 aa	Known RBP	4.58	□□□□□ -1.68
SEN1	YLR430W	RAD1	P06777	1100 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	INA22	P40576	216 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	CNS1	P33313	385 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	MET18	P40469	1032 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	SDS3	P40505	327 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	MDJ2	P42834	146 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	SGM1	P47166	707 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	RRP46	P53256	223 aa	Predicted RBP	4.57	□□□□□ -1.68
SEN1	YLR430W	COG6	P53959	839 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	CDC8	P00572	216 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	MRPL40	P36534	297 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	ENP2	P48234	707 aa	Known RBP	4.57	□□□□□ -1.68
SEN1	YLR430W	HXT17	P53631	564 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	CEF1	Q03654	590 aa	Predicted RBP	4.57	□□□□□ -1.68
SEN1	YLR430W	MSH5	Q12175	901 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	TRP5	P00931	707 aa	Known RBP	4.57	□□□□□ -1.68
SEN1	YLR430W	PET112	P33893	541 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	SFB2	P53953	876 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	HFD1	Q04458	532 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	LOS1	P33418	1100 aa	Predicted RBP	4.57	□□□□□ -1.68
SEN1	YLR430W	COY1	P34237	679 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	FAR11	P53917	953 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	RPB2	P08518	1224 aa	Known RBP	4.57	□□□□□ -1.68
SEN1	YLR430W	CSE1	P33307	960 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	AMN1	P38285	549 aa	Predicted RBP	4.57	□□□□□ -1.68
SEN1	YLR430W	AIM9	P40053	627 aa	Known RBP	4.57	□□□□□ -1.68
SEN1	YLR430W	GVP36	P40531	326 aa	Known RBP	4.57	□□□□□ -1.68
SEN1	YLR430W	STB1	P42845	420 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	FMS1	P50264	508 aa		4.57	□□□□□ -1.68
SEN1	YLR430W	UTP22	P53254	1237 aa	Predicted RBP	4.57	□□□□□ -1.68
SEN1	YLR430W	COP1	P53622	1201 aa	Known RBP	4.57	□□□□□ -1.68
SEN1	YLR430W	SPP382	Q06411	708 aa	Predicted RBP	4.57	□□□□□ -1.68
SEN1	YLR430W	ESP1	Q03018	1630 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	SEC6	P32844	805 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	SSO1	P32867	290 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	RPC34	P32910	317 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	EFM2	P38347	419 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	BNI5	P53890	448 aa	Known RBP	4.56	□□□□□ -1.68
SEN1	YLR430W	ALF1	P53904	254 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	GTR1	Q00582	310 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	YOL098C	Q12496	1037 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	PET494	P07390	489 aa	Predicted RBP	4.56	□□□□□ -1.68
SEN1	YLR430W	CDC16	P09798	840 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	YPR097W	Q06839	1073 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	SNT2	P53127	1403 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	VPH2	P32341	215 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	SAS3	P34218	831 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	SCS2	P40075	244 aa	Known RBP	4.56	□□□□□ -1.68
SEN1	YLR430W	ERP6	P53198	216 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	TFB2	Q02939	513 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	HEH2	Q03281	663 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	OCA6	Q12454	224 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	FRS2	P15625	503 aa	Known RBP	4.56	□□□□□ -1.68
SEN1	YLR430W	ITR2	P30606	609 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	DBP7	P36120	742 aa	Known RBP	4.56	□□□□□ -1.68
SEN1	YLR430W	YHR020W	P38708	688 aa	Known RBP	4.56	□□□□□ -1.68
SEN1	YLR430W	DAS1	P47005	663 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	RBL2	P48606	106 aa	Known RBP	4.56	□□□□□ -1.68
SEN1	YLR430W	RPA14	P50106	137 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	CAF130	P53280	1122 aa	Predicted RBP	4.56	□□□□□ -1.68
SEN1	YLR430W	YKR005C	Q02203	525 aa		4.56	□□□□□ -1.68
SEN1	YLR430W	HMG1	P12683	1054 aa		4.55	□□□□□ -1.68
SEN1	YLR430W	SEN2	P16658	377 aa		4.55	□□□□□ -1.68
SEN1	YLR430W	YCR016W	P25617	290 aa	Known RBP	4.55	□□□□□ -1.68
SEN1	YLR430W	VPS75	P53853	264 aa		4.55	□□□□□ -1.68
SEN1	YLR430W	RSA1	Q08932	381 aa		4.55	□□□□□ -1.68
SEN1	YLR430W	NUR1	Q12066	484 aa		4.55	□□□□□ -1.68
SEN1	YLR430W	KAR2	P16474	682 aa	Known RBP	4.55	□□□□□ -1.68
SEN1	YLR430W	SSA4	P22202	642 aa	Known RBP	4.55	□□□□□ -1.68
SEN1	YLR430W	YPR172W	Q06608	200 aa		4.55	□□□□□ -1.68
SEN1	YLR430W	TSR2	Q06672	205 aa	Known RBP	4.55	□□□□□ -1.68
SEN1	YLR430W	GPA1	P08539	472 aa		4.55	□□□□□ -1.68
SEN1	YLR430W	DAL7	P21826	554 aa		4.55	□□□□□ -1.68
SEN1	YLR430W	YKT6	P36015	200 aa	Known RBP	4.55	□□□□□ -1.68
SEN1	YLR430W	SAK1	P38990	1142 aa		4.55	□□□□□ -1.68
SEN1	YLR430W	YPT11	P48559	417 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms