RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC3	YLR219W	YLR407W	Q06070	228 aa		7.77	□□□□□ -1.17
MSC3	YLR219W	YOR111W	Q99210	232 aa		7.77	□□□□□ -1.17
MSC3	YLR219W	TUS1	Q06412	1307 aa		7.76	□□□□□ -1.17
MSC3	YLR219W	KRS1	P15180	591 aa	Known RBP	7.76	□□□□□ -1.17
MSC3	YLR219W	TIF4631	P39935	952 aa	Known RBP	7.76	□□□□□ -1.17
MSC3	YLR219W	ACA1	P39970	489 aa		7.76	□□□□□ -1.17
MSC3	YLR219W	SAM2	P19358	384 aa	Known RBP	7.76	□□□□□ -1.17
MSC3	YLR219W	SPB4	P25808	606 aa	Predicted RBP	7.76	□□□□□ -1.17
MSC3	YLR219W	IME2	P32581	645 aa		7.76	□□□□□ -1.17
MSC3	YLR219W	FOL1	P53848	824 aa		7.76	□□□□□ -1.17
MSC3	YLR219W	VPS30	Q02948	557 aa		7.76	□□□□□ -1.17
MSC3	YLR219W	SRP54	P20424	541 aa	Known RBP	7.75	□□□□□ -1.17
MSC3	YLR219W	RPL8B	P29453	256 aa	Known RBP	7.75	□□□□□ -1.17
MSC3	YLR219W	YHL017W	P38745	532 aa		7.75	□□□□□ -1.17
MSC3	YLR219W	PEX29	Q03370	554 aa		7.75	□□□□□ -1.17
MSC3	YLR219W	NUC1	P08466	329 aa		7.74	□□□□□ -1.17
MSC3	YLR219W	SIS2	P36024	562 aa		7.74	□□□□□ -1.17
MSC3	YLR219W	TYW1	Q08960	810 aa	Known RBP	7.74	□□□□□ -1.17
MSC3	YLR219W	GIN4	Q12263	1142 aa		7.74	□□□□□ -1.17
MSC3	YLR219W	MYO1	P08964	1928 aa		7.74	□□□□□ -1.17
MSC3	YLR219W	CPA2	P03965	1118 aa	Known RBP	7.74	□□□□□ -1.17
MSC3	YLR219W	HCA4	P20448	770 aa	Known RBP	7.74	□□□□□ -1.17
MSC3	YLR219W	RNR3	P21672	869 aa	Known RBP	7.74	□□□□□ -1.17
MSC3	YLR219W	SWI4	P25302	1093 aa	Known RBP	7.74	□□□□□ -1.17
MSC3	YLR219W	MAL31	P38156	614 aa		7.74	□□□□□ -1.17
MSC3	YLR219W	ALG2	P43636	503 aa		7.74	□□□□□ -1.17
MSC3	YLR219W	PSK2	Q08217	1101 aa		7.74	□□□□□ -1.17
MSC3	YLR219W	LSP1	Q12230	341 aa	Known RBP	7.74	□□□□□ -1.17
MSC3	YLR219W	RPN10	P38886	268 aa	Known RBP	7.73	□□□□□ -1.17
MSC3	YLR219W	UBP9	P39967	754 aa		7.73	□□□□□ -1.17
MSC3	YLR219W	RRT6	P53117	311 aa	Predicted RBP	7.73	□□□□□ -1.17
MSC3	YLR219W	UBP10	P53874	792 aa	Predicted RBP	7.73	□□□□□ -1.17
MSC3	YLR219W	HRQ1	Q05549	1077 aa		7.73	□□□□□ -1.17
MSC3	YLR219W	ELG1	Q12050	791 aa		7.73	□□□□□ -1.17
MSC3	YLR219W	YPL150W	Q12152	901 aa		7.73	□□□□□ -1.17
MSC3	YLR219W	BMH2	P34730	273 aa	Known RBP	7.73	□□□□□ -1.17
MSC3	YLR219W	DSE3	Q08729	430 aa		7.73	□□□□□ -1.17
MSC3	YLR219W	PRX1	P34227	261 aa	Known RBP	7.72	□□□□□ -1.17
MSC3	YLR219W	BUD6	P41697	788 aa		7.72	□□□□□ -1.17
MSC3	YLR219W	YGL081W	P53156	320 aa		7.72	□□□□□ -1.17
MSC3	YLR219W	MDM1	Q01846	1127 aa		7.72	□□□□□ -1.17
MSC3	YLR219W	SUE1	Q06524	206 aa		7.72	□□□□□ -1.17
MSC3	YLR219W	MET6	P05694	767 aa	Known RBP	7.71	□□□□□ -1.17
MSC3	YLR219W	ERG12	P07277	443 aa		7.71	□□□□□ -1.17
MSC3	YLR219W	FBP1	P09201	348 aa		7.71	□□□□□ -1.17
MSC3	YLR219W	BIK1	P11709	440 aa		7.71	□□□□□ -1.17
MSC3	YLR219W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.71	□□□□□ -1.17	not detected
MSC3	YLR219W	PES4	P39684	611 aa		7.71	□□□□□ -1.17
MSC3	YLR219W	PCI8	P40512	444 aa		7.71	□□□□□ -1.17
MSC3	YLR219W	DJP1	P40564	432 aa		7.71	□□□□□ -1.17
MSC3	YLR219W	DMA2	P53924	522 aa		7.71	□□□□□ -1.17
MSC3	YLR219W	CLF1	Q12309	687 aa	Predicted RBP	7.71	□□□□□ -1.17
MSC3	YLR219W	CBP3	P21560	335 aa		7.71	□□□□□ -1.18
MSC3	YLR219W	VPS1	P21576	704 aa	Known RBP	7.71	□□□□□ -1.18
MSC3	YLR219W	DIT2	P21595	489 aa		7.71	□□□□□ -1.18
MSC3	YLR219W	YDJ1	P25491	409 aa	Known RBP	7.71	□□□□□ -1.18
MSC3	YLR219W	VPS24	P36095	224 aa	Known RBP	7.71	□□□□□ -1.18
MSC3	YLR219W	TTI1	P36097	1038 aa		7.71	□□□□□ -1.18
MSC3	YLR219W	RFC5	P38251	354 aa		7.71	□□□□□ -1.18
MSC3	YLR219W	RXT2	P38255	430 aa		7.71	□□□□□ -1.18
MSC3	YLR219W	CDC6	P09119	513 aa		7.7	□□□□□ -1.18
MSC3	YLR219W	STI1	P15705	589 aa	Known RBP RIP-Chip data	7.7	□□□□□ -1.18	not detected
MSC3	YLR219W	MBR1	P23493	339 aa		7.7	□□□□□ -1.18
MSC3	YLR219W	OCT1	P35999	772 aa		7.7	□□□□□ -1.18
MSC3	YLR219W	YKR023W	P36119	530 aa	Known RBP	7.7	□□□□□ -1.18
MSC3	YLR219W	VPS45	P38932	577 aa		7.7	□□□□□ -1.18
MSC3	YLR219W	YDR341C	Q05506	607 aa	Known RBP	7.7	□□□□□ -1.18
MSC3	YLR219W	HSP82	P02829	709 aa	Known RBP	7.7	□□□□□ -1.18
MSC3	YLR219W	HVG1	P0CE11	249 aa		7.7	□□□□□ -1.18
MSC3	YLR219W	TOM71	P38825	639 aa	Known RBP	7.7	□□□□□ -1.18
MSC3	YLR219W	BDH2	P39713	417 aa		7.7	□□□□□ -1.18
MSC3	YLR219W	YJL007C	P47080	104 aa		7.7	□□□□□ -1.18
MSC3	YLR219W	YML037C	Q03703	340 aa		7.7	□□□□□ -1.18
MSC3	YLR219W	CST9	Q06032	482 aa		7.7	□□□□□ -1.18
MSC3	YLR219W	MAL33	P38157	468 aa		7.69	□□□□□ -1.18
MSC3	YLR219W	SOL4	P53315	255 aa		7.69	□□□□□ -1.18
MSC3	YLR219W	GDE1	Q02979	1223 aa		7.69	□□□□□ -1.18
MSC3	YLR219W	SUB2	Q07478	446 aa	Known RBP	7.69	□□□□□ -1.18
MSC3	YLR219W	CIT1	P00890	479 aa		7.69	□□□□□ -1.18
MSC3	YLR219W	RDS1	P25611	832 aa		7.69	□□□□□ -1.18
MSC3	YLR219W	RSM7	P47150	247 aa		7.69	□□□□□ -1.18
MSC3	YLR219W	ASE1	P50275	885 aa		7.69	□□□□□ -1.18
MSC3	YLR219W	UTP4	Q06679	776 aa	Known RBP	7.69	□□□□□ -1.18
MSC3	YLR219W	DCS2	Q12123	353 aa		7.69	□□□□□ -1.18
MSC3	YLR219W	NDT80	P38830	627 aa		7.68	□□□□□ -1.18
MSC3	YLR219W	GIS4	Q04233	774 aa		7.68	□□□□□ -1.18
MSC3	YLR219W	ETP1	P38748	585 aa	Known RBP	7.67	□□□□□ -1.18
MSC3	YLR219W	LYS14	P40971	790 aa		7.67	□□□□□ -1.18
MSC3	YLR219W	PEX14	P53112	341 aa		7.67	□□□□□ -1.18
MSC3	YLR219W	YGL138C	P53122	345 aa		7.67	□□□□□ -1.18
MSC3	YLR219W	HST1	P53685	503 aa		7.67	□□□□□ -1.18
MSC3	YLR219W	UBX5	Q06682	500 aa		7.67	□□□□□ -1.18
MSC3	YLR219W	RAD18	P10862	487 aa		7.67	□□□□□ -1.18
MSC3	YLR219W	PHO88	P38264	188 aa	Predicted RBP	7.66	□□□□□ -1.18
MSC3	YLR219W	BSD2	P38356	321 aa		7.66	□□□□□ -1.18
MSC3	YLR219W	CCT3	P39077	534 aa	Known RBP	7.66	□□□□□ -1.18
MSC3	YLR219W	GET3	Q12154	354 aa	Known RBP	7.66	□□□□□ -1.18
MSC3	YLR219W	TOM1	Q03280	3268 aa		7.66	□□□□□ -1.18
MSC3	YLR219W	MSP1	P28737	362 aa		7.66	□□□□□ -1.18
MSC3	YLR219W	HYR1	P40581	163 aa	Known RBP	7.66	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms