RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeast

Gene PBA1, Length 831 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBA1	YLR199C	ERP5	P38819	212 aa		4.75	□□□□□ -1.65
PBA1	YLR199C	HXT8	P40886	569 aa		4.75	□□□□□ -1.65
PBA1	YLR199C	OYE3	P41816	400 aa	Predicted RBP	4.75	□□□□□ -1.65
PBA1	YLR199C	RRP15	Q06511	250 aa	Predicted RBP	4.75	□□□□□ -1.65
PBA1	YLR199C	MSC6	Q08818	692 aa	Known RBP	4.75	□□□□□ -1.65
PBA1	YLR199C	RGD2	P43556	714 aa		4.74	□□□□□ -1.65
PBA1	YLR199C	NNF1	P47149	201 aa		4.74	□□□□□ -1.65
PBA1	YLR199C	YMR074C	Q04773	145 aa		4.74	□□□□□ -1.65
PBA1	YLR199C	FET4	P40988	552 aa		4.73	□□□□□ -1.65
PBA1	YLR199C	ORC3	P54790	616 aa		4.73	□□□□□ -1.65
PBA1	YLR199C	FPR4	Q06205	392 aa	Predicted RBP	4.73	□□□□□ -1.65
PBA1	YLR199C	GLO4	Q12320	285 aa		4.73	□□□□□ -1.65
PBA1	YLR199C	ATE1	P16639	503 aa		4.72	□□□□□ -1.65
PBA1	YLR199C	ADP1	P25371	1049 aa		4.72	□□□□□ -1.65
PBA1	YLR199C	POL32	P47110	350 aa		4.72	□□□□□ -1.65
PBA1	YLR199C	MSH6	Q03834	1242 aa		4.72	□□□□□ -1.65
PBA1	YLR199C	SPA2	P23201	1466 aa	Known RBP	4.71	□□□□□ -1.66
PBA1	YLR199C	YHL050C	P38721	697 aa		4.71	□□□□□ -1.66
PBA1	YLR199C	YHR219W	P38900	624 aa		4.71	□□□□□ -1.66
PBA1	YLR199C	DOT1	Q04089	582 aa	Known RBP	4.71	□□□□□ -1.66
PBA1	YLR199C	KAR5	Q04746	504 aa		4.71	□□□□□ -1.66
PBA1	YLR199C	SVF1	Q05515	481 aa		4.71	□□□□□ -1.66
PBA1	YLR199C	TRL1	P09880	827 aa	Known RBP	4.7	□□□□□ -1.66
PBA1	YLR199C	GRS1	P38088	690 aa	Known RBP	4.7	□□□□□ -1.66
PBA1	YLR199C	NTA1	P40354	457 aa		4.7	□□□□□ -1.66
PBA1	YLR199C	YAF9	P53930	226 aa		4.7	□□□□□ -1.66
PBA1	YLR199C	PUN1	Q06991	263 aa		4.7	□□□□□ -1.66
PBA1	YLR199C	NMD2	P38798	1089 aa	Known RBP	4.69	□□□□□ -1.66
PBA1	YLR199C	MDJ2	P42834	146 aa		4.69	□□□□□ -1.66
PBA1	YLR199C	OYE2	Q03558	400 aa	Known RBP	4.69	□□□□□ -1.66
PBA1	YLR199C	PUF6	Q04373	656 aa	Known RBP	4.69	□□□□□ -1.66
PBA1	YLR199C	YLL054C	Q12244	843 aa		4.69	□□□□□ -1.66
PBA1	YLR199C	SEC8	P32855	1065 aa		4.68	□□□□□ -1.66
PBA1	YLR199C	AIM3	P38266	947 aa	Known RBP	4.68	□□□□□ -1.66
PBA1	YLR199C	PPX1	P38698	397 aa		4.68	□□□□□ -1.66
PBA1	YLR199C	SSY1	Q03770	852 aa		4.68	□□□□□ -1.66
PBA1	YLR199C	WHI5	Q12416	295 aa		4.68	□□□□□ -1.66
PBA1	YLR199C	RPS4A	P0CX35	261 aa	Known RBP	4.67	□□□□□ -1.66
PBA1	YLR199C	RPS4B	P0CX36	261 aa	Known RBP	4.67	□□□□□ -1.66
PBA1	YLR199C	KTR2	P33550	425 aa		4.67	□□□□□ -1.66
PBA1	YLR199C	THI12	P42883	340 aa		4.67	□□□□□ -1.66
PBA1	YLR199C	THI5	P43534	340 aa		4.67	□□□□□ -1.66
PBA1	YLR199C	THI11	P47183	340 aa		4.67	□□□□□ -1.66
PBA1	YLR199C	CWC15	Q03772	175 aa	Known RBP	4.67	□□□□□ -1.66
PBA1	YLR199C	THI13	Q07748	340 aa		4.67	□□□□□ -1.66
PBA1	YLR199C	TIF6	Q12522	245 aa	Known RBP	4.67	□□□□□ -1.66
PBA1	YLR199C	PYC2	P32327	1180 aa	Known RBP	4.66	□□□□□ -1.66
PBA1	YLR199C	ATG36	P46983	293 aa		4.66	□□□□□ -1.66
PBA1	YLR199C	SUT1	P53032	299 aa	Known RBP	4.66	□□□□□ -1.66
PBA1	YLR199C	GSF2	Q04697	403 aa	Known RBP	4.66	□□□□□ -1.66
PBA1	YLR199C	JIP5	Q06214	492 aa	Predicted RBP	4.66	□□□□□ -1.66
PBA1	YLR199C	TRE1	Q08919	783 aa		4.66	□□□□□ -1.66
PBA1	YLR199C	LPX1	Q12405	387 aa	Known RBP	4.66	□□□□□ -1.66
PBA1	YLR199C	YOL098C	Q12496	1037 aa		4.66	□□□□□ -1.66
PBA1	YLR199C	SRS2	P12954	1174 aa		4.65	□□□□□ -1.67
PBA1	YLR199C	RAD55	P38953	406 aa		4.65	□□□□□ -1.67
PBA1	YLR199C	GCV1	P48015	400 aa		4.65	□□□□□ -1.67
PBA1	YLR199C	ATG1	P53104	897 aa		4.65	□□□□□ -1.67
PBA1	YLR199C	RNH70	P53331	553 aa		4.65	□□□□□ -1.67
PBA1	YLR199C	IRS4	P36115	615 aa	Known RBP	4.64	□□□□□ -1.67
PBA1	YLR199C	PSY2	P40164	858 aa		4.64	□□□□□ -1.67
PBA1	YLR199C	YJR107W	P47145	328 aa		4.64	□□□□□ -1.67
PBA1	YLR199C	ALT1	P52893	592 aa		4.64	□□□□□ -1.67
PBA1	YLR199C	RIM8	P53179	542 aa		4.64	□□□□□ -1.67
PBA1	YLR199C	APC11	Q12157	165 aa		4.64	□□□□□ -1.67
PBA1	YLR199C	TAD3	Q9URQ3	322 aa		4.64	□□□□□ -1.67
PBA1	YLR199C	PRO1	P32264	428 aa		4.63	□□□□□ -1.67
PBA1	YLR199C	MGE1	P38523	228 aa		4.63	□□□□□ -1.67
PBA1	YLR199C	PEX7	P39108	375 aa		4.63	□□□□□ -1.67
PBA1	YLR199C	BOL3	P39724	118 aa		4.63	□□□□□ -1.67
PBA1	YLR199C	MSH4	P40965	878 aa	Predicted RBP	4.63	□□□□□ -1.67
PBA1	YLR199C	RTS3	P53289	263 aa		4.63	□□□□□ -1.67
PBA1	YLR199C	MRPL22	P53881	309 aa		4.63	□□□□□ -1.67
PBA1	YLR199C	PNP1	Q05788	311 aa		4.63	□□□□□ -1.67
PBA1	YLR199C	NUG1	P40010	520 aa	Known RBP	4.62	□□□□□ -1.67
PBA1	YLR199C	EAR1	Q03212	550 aa		4.62	□□□□□ -1.67
PBA1	YLR199C	NUT2	Q06213	157 aa		4.62	□□□□□ -1.67
PBA1	YLR199C	YIG1	Q08956	461 aa		4.62	□□□□□ -1.67
PBA1	YLR199C	YVC1	Q12324	675 aa		4.62	□□□□□ -1.67
PBA1	YLR199C	SMC1	P32908	1225 aa		4.61	□□□□□ -1.67
PBA1	YLR199C	YJR008W	P47085	338 aa		4.61	□□□□□ -1.67
PBA1	YLR199C	YDL177C	Q12257	170 aa		4.61	□□□□□ -1.67
PBA1	YLR199C	FRT1	Q99332	602 aa		4.61	□□□□□ -1.67
PBA1	YLR199C	NFS1	P25374	497 aa		4.6	□□□□□ -1.67
PBA1	YLR199C	MET4	P32389	672 aa		4.6	□□□□□ -1.67
PBA1	YLR199C	PPG1	P32838	368 aa		4.6	□□□□□ -1.67
PBA1	YLR199C	GLO3	P38682	493 aa	Known RBP	4.6	□□□□□ -1.67
PBA1	YLR199C	VAC8	P39968	578 aa		4.6	□□□□□ -1.67
PBA1	YLR199C	QDR1	P40475	563 aa		4.6	□□□□□ -1.67
PBA1	YLR199C	ACF4	P47129	309 aa		4.6	□□□□□ -1.67
PBA1	YLR199C	MNL2	Q12205	849 aa		4.6	□□□□□ -1.67
PBA1	YLR199C	KOG1	P38873	1557 aa		4.6	□□□□□ -1.67
PBA1	YLR199C	SOD2	P00447	233 aa		4.59	□□□□□ -1.67
PBA1	YLR199C	FUR4	P05316	633 aa	Known RBP	4.59	□□□□□ -1.67
PBA1	YLR199C	RPB10	P22139	70 aa		4.59	□□□□□ -1.67
PBA1	YLR199C	SRP40	P32583	406 aa	Predicted RBP	4.59	□□□□□ -1.67
PBA1	YLR199C	TOD6	P34219	525 aa		4.59	□□□□□ -1.67
PBA1	YLR199C	RRP14	P36080	434 aa	Known RBP	4.59	□□□□□ -1.67
PBA1	YLR199C	ABZ1	P37254	787 aa	Predicted RBP	4.59	□□□□□ -1.67
PBA1	YLR199C	HTS1	P07263	546 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 69 ms