RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C PRO1P32264 428 aa5.95□□□□□ -1.46
CMS1YLR003C EAR1Q03212 550 aa5.95□□□□□ -1.46
CMS1YLR003C YVC1Q12324 675 aa5.95□□□□□ -1.46
CMS1YLR003C NPR1P22211 790 aa5.94□□□□□ -1.46
CMS1YLR003C AIM3P38266 947 aaKnown RBP5.94□□□□□ -1.46
CMS1YLR003C YML083CQ04526 418 aa5.94□□□□□ -1.46
CMS1YLR003C RIM8P53179 542 aa5.93□□□□□ -1.46
CMS1YLR003C MRPL22P53881 309 aa5.93□□□□□ -1.46
CMS1YLR003C REI1P38344 393 aaPredicted RBP5.92□□□□□ -1.46
CMS1YLR003C RIM11P38615 370 aa5.92□□□□□ -1.46
CMS1YLR003C ALG6Q12001 544 aaKnown RBP5.92□□□□□ -1.46
CMS1YLR003C FUR4P05316 633 aaKnown RBP5.91□□□□□ -1.46
CMS1YLR003C NFS1P25374 497 aa5.91□□□□□ -1.46
CMS1YLR003C UTP22P53254 1237 aaPredicted RBP5.91□□□□□ -1.46
CMS1YLR003C CMR1Q12510 522 aaKnown RBP5.91□□□□□ -1.46
CMS1YLR003C PRP5P21372 849 aaPredicted RBP5.9□□□□□ -1.46
CMS1YLR003C SMY2P32909 740 aaKnown RBP5.9□□□□□ -1.46
CMS1YLR003C ECM2P38241 364 aaKnown RBP5.9□□□□□ -1.46
CMS1YLR003C COBP00163 385 aa5.89□□□□□ -1.47
CMS1YLR003C PTC7P38797 343 aa5.89□□□□□ -1.47
CMS1YLR003C GSF2Q04697 403 aaKnown RBP5.89□□□□□ -1.47
CMS1YLR003C YDL177CQ12257 170 aa5.89□□□□□ -1.47
CMS1YLR003C NOB1Q08444 459 aaKnown RBP5.88□□□□□ -1.47
CMS1YLR003C SSA4P22202 642 aaKnown RBP5.87□□□□□ -1.47
CMS1YLR003C NNK1P36003 928 aa5.87□□□□□ -1.47
CMS1YLR003C SOD2P00447 233 aa5.86□□□□□ -1.47
CMS1YLR003C GTS1P40956 396 aa5.86□□□□□ -1.47
CMS1YLR003C ELA1P53861 379 aaPredicted RBP5.86□□□□□ -1.47
CMS1YLR003C BOL3P39724 118 aa5.85□□□□□ -1.47
CMS1YLR003C YGR045CP53229 120 aa5.85□□□□□ -1.47
CMS1YLR003C RSC4Q02206 625 aa5.85□□□□□ -1.47
CMS1YLR003C DUR3P33413 735 aa5.84□□□□□ -1.47
CMS1YLR003C TOD6P34219 525 aa5.84□□□□□ -1.47
CMS1YLR003C AVO1Q08236 1176 aa5.84□□□□□ -1.47
CMS1YLR003C ARL1P38116 183 aaKnown RBP5.83□□□□□ -1.48
CMS1YLR003C ETP1P38748 585 aaKnown RBP5.83□□□□□ -1.48
CMS1YLR003C YPL277CQ08989 487 aa5.82□□□□□ -1.48
CMS1YLR003C ABZ1P37254 787 aaPredicted RBP5.81□□□□□ -1.48
CMS1YLR003C UFD2P54860 961 aa5.81□□□□□ -1.48
CMS1YLR003C PUS7Q08647 676 aaKnown RBP5.81□□□□□ -1.48
CMS1YLR003C RPS13P05756 151 aaKnown RBP5.8□□□□□ -1.48
CMS1YLR003C SAP155P43612 1002 aa5.79□□□□□ -1.48
CMS1YLR003C FOL2P51601 243 aaKnown RBP5.79□□□□□ -1.48
CMS1YLR003C SNO2P53823 222 aa5.79□□□□□ -1.48
CMS1YLR003C TPP1Q03796 238 aa5.79□□□□□ -1.48
CMS1YLR003C DMA2P53924 522 aa5.78□□□□□ -1.48
CMS1YLR003C CLU1Q03690 1277 aaKnown RBP5.78□□□□□ -1.48
CMS1YLR003C TAD3Q9URQ3 322 aa5.78□□□□□ -1.48
CMS1YLR003C YLR358CO13565 187 aa5.77□□□□□ -1.49
CMS1YLR003C PMT7Q06644 662 aa5.77□□□□□ -1.49
CMS1YLR003C TUB2P02557 457 aaKnown RBP5.76□□□□□ -1.49
CMS1YLR003C TY1A-LR4P0C2I8 440 aaKnown RBP5.76□□□□□ -1.49
CMS1YLR003C TY1A-DR6P0CX70 440 aa5.76□□□□□ -1.49
CMS1YLR003C TY1A-ER1P0CX71 440 aa5.76□□□□□ -1.49
CMS1YLR003C TY1A-LR2P0CX72 440 aa5.76□□□□□ -1.49
CMS1YLR003C TY1A-PLP0CX73 440 aa5.76□□□□□ -1.49
CMS1YLR003C TY1A-JR1P0CX74 440 aa5.76□□□□□ -1.49
CMS1YLR003C TY1A-LR3P0CX75 440 aa5.76□□□□□ -1.49
CMS1YLR003C TY1A-ML2P0CX76 440 aa5.76□□□□□ -1.49
CMS1YLR003C SHM2P37291 469 aaKnown RBP5.76□□□□□ -1.49
CMS1YLR003C YAF9P53930 226 aa5.76□□□□□ -1.49
CMS1YLR003C TY1A-GR1Q12085 440 aa5.76□□□□□ -1.49
CMS1YLR003C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.76□□□□□ -1.49
CMS1YLR003C TY1A-OLQ92392 440 aaKnown RBP5.76□□□□□ -1.49
CMS1YLR003C SAM35P14693 329 aa5.74□□□□□ -1.49
CMS1YLR003C GLO3P38682 493 aaKnown RBP5.74□□□□□ -1.49
CMS1YLR003C YHL012WP38709 493 aa5.74□□□□□ -1.49
CMS1YLR003C NUT1P53114 1132 aa5.74□□□□□ -1.49
CMS1YLR003C PNS1Q12412 539 aa5.74□□□□□ -1.49
CMS1YLR003C FLP1P03870 423 aa5.73□□□□□ -1.49
CMS1YLR003C PRE10P21242 288 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
CMS1YLR003C CTS1P29029 562 aa5.73□□□□□ -1.49
CMS1YLR003C YKL077WP36081 392 aa5.73□□□□□ -1.49
CMS1YLR003C LEO1P38439 464 aa5.73□□□□□ -1.49
CMS1YLR003C YNL011CP53980 444 aa5.73□□□□□ -1.49
CMS1YLR003C BSC2Q05611 235 aa5.73□□□□□ -1.49
CMS1YLR003C MDL2P33311 773 aa5.72□□□□□ -1.49
CMS1YLR003C MCM5P29496 775 aaKnown RBP5.71□□□□□ -1.5
CMS1YLR003C QDR1P40475 563 aa5.71□□□□□ -1.5
CMS1YLR003C RET1P22276 1149 aaKnown RBP5.7□□□□□ -1.5
CMS1YLR003C YAR028WP39548 234 aa5.7□□□□□ -1.5
CMS1YLR003C SLS1P42900 643 aa5.7□□□□□ -1.5
CMS1YLR003C YLR257WQ06146 321 aaKnown RBP5.7□□□□□ -1.5
CMS1YLR003C EXO5P38289 585 aa5.69□□□□□ -1.5
CMS1YLR003C NMD3P38861 518 aaKnown RBP5.69□□□□□ -1.5
CMS1YLR003C AIM26P32858 118 aa5.68□□□□□ -1.5
CMS1YLR003C SHU2P38957 223 aa5.68□□□□□ -1.5
CMS1YLR003C RVS167P39743 482 aaKnown RBP5.68□□□□□ -1.5
CMS1YLR003C CDC55Q00362 526 aa5.68□□□□□ -1.5
CMS1YLR003C NEM1P38757 446 aa5.67□□□□□ -1.5
CMS1YLR003C TAT2P38967 592 aa5.67□□□□□ -1.5
CMS1YLR003C MPT5P39016 859 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
CMS1YLR003C KAR5Q04746 504 aa5.67□□□□□ -1.5
CMS1YLR003C HRK1Q08732 759 aaKnown RBP5.67□□□□□ -1.5
CMS1YLR003C SRO9P25567 434 aaKnown RBP5.66□□□□□ -1.5
CMS1YLR003C HSE1P38753 452 aa5.66□□□□□ -1.5
CMS1YLR003C TRS120Q04183 1289 aa5.66□□□□□ -1.5
CMS1YLR003C MNL2Q12205 849 aa5.66□□□□□ -1.5
CMS1YLR003C MTR4P47047 1073 aaKnown RBP5.65□□□□□ -1.5
CMS1YLR003C ENV11P53246 860 aa5.65□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms