RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W CRF1Q04930 467 aa7.13□□□□□ -1.27
GEF1YJR040W ISW2Q08773 1120 aa7.13□□□□□ -1.27
GEF1YJR040W ELG1Q12050 791 aa7.13□□□□□ -1.27
GEF1YJR040W SSF2Q12153 453 aaPredicted RBP7.13□□□□□ -1.27
GEF1YJR040W RRG1Q12167 365 aaPredicted RBP7.13□□□□□ -1.27
GEF1YJR040W PUS1Q12211 544 aaKnown RBP7.13□□□□□ -1.27
GEF1YJR040W DDP1Q99321 188 aaKnown RBP7.13□□□□□ -1.27
GEF1YJR040W OSW7P43611 510 aa7.12□□□□□ -1.27
GEF1YJR040W IRC8P47046 822 aa7.12□□□□□ -1.27
GEF1YJR040W KAR5Q04746 504 aa7.12□□□□□ -1.27
GEF1YJR040W INM2Q05533 292 aa7.12□□□□□ -1.27
GEF1YJR040W ARG82P07250 355 aa7.12□□□□□ -1.27
GEF1YJR040W MET1P36150 593 aa7.12□□□□□ -1.27
GEF1YJR040W BOI1P38041 980 aaKnown RBP7.12□□□□□ -1.27
GEF1YJR040W MAL33P38157 468 aa7.12□□□□□ -1.27
GEF1YJR040W NOC2P39744 710 aaKnown RBP7.12□□□□□ -1.27
GEF1YJR040W PKH3Q03306 898 aaPredicted RBP7.12□□□□□ -1.27
GEF1YJR040W RAD51P25454 400 aa7.11□□□□□ -1.27
GEF1YJR040W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
GEF1YJR040W RFC5P38251 354 aa7.11□□□□□ -1.27
GEF1YJR040W RRM3P38766 723 aa7.11□□□□□ -1.27
GEF1YJR040W SET4P42948 560 aa7.11□□□□□ -1.27
GEF1YJR040W MSM1P22438 575 aa7.11□□□□□ -1.27
GEF1YJR040W SPT5P27692 1063 aaKnown RBP7.11□□□□□ -1.27
GEF1YJR040W PTK1P36002 662 aaPredicted RBP7.11□□□□□ -1.27
GEF1YJR040W APL6P46682 809 aa7.11□□□□□ -1.27
GEF1YJR040W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
GEF1YJR040W DMA2P53924 522 aa7.11□□□□□ -1.27
GEF1YJR040W ATG20Q07528 640 aa7.11□□□□□ -1.27
GEF1YJR040W YPL150WQ12152 901 aa7.11□□□□□ -1.27
GEF1YJR040W YIR042CP40586 236 aa7.1□□□□□ -1.27
GEF1YJR040W ESF1Q06344 628 aaKnown RBP7.1□□□□□ -1.27
GEF1YJR040W GIN4Q12263 1142 aa7.1□□□□□ -1.27
GEF1YJR040W SEC39Q12745 709 aa7.1□□□□□ -1.27
GEF1YJR040W LAM4P38800 1345 aa7.1□□□□□ -1.27
GEF1YJR040W SNF3P10870 884 aa7.1□□□□□ -1.27
GEF1YJR040W IMP2'P32351 346 aa7.1□□□□□ -1.27
GEF1YJR040W BUD6P41697 788 aa7.1□□□□□ -1.27
GEF1YJR040W YMR1P47147 688 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
GEF1YJR040W PIP2P52960 996 aa7.1□□□□□ -1.27
GEF1YJR040W AAD16Q02895 342 aa7.1□□□□□ -1.27
GEF1YJR040W PSK2Q08217 1101 aa7.1□□□□□ -1.27
GEF1YJR040W YPL225WQ08971 146 aaKnown RBP7.1□□□□□ -1.27
GEF1YJR040W SRP40P32583 406 aaPredicted RBP7.09□□□□□ -1.27
GEF1YJR040W GRX7P38068 203 aa7.09□□□□□ -1.27
GEF1YJR040W YMR147WP40218 223 aaKnown RBP7.09□□□□□ -1.27
GEF1YJR040W YKE2P52553 114 aa7.09□□□□□ -1.27
GEF1YJR040W TOP1P04786 769 aa7.09□□□□□ -1.28
GEF1YJR040W CBF5P33322 483 aaKnown RBP RIP-Chip data7.09□□□□□ -1.28not detected
GEF1YJR040W SLD2P34252 453 aa7.09□□□□□ -1.28
GEF1YJR040W MVP1P40959 511 aaKnown RBP7.09□□□□□ -1.28
GEF1YJR040W WAR1Q03631 944 aa7.09□□□□□ -1.28
GEF1YJR040W COG4Q06096 861 aa7.09□□□□□ -1.28
GEF1YJR040W MDL2P33311 773 aa7.08□□□□□ -1.28
GEF1YJR040W YHL017WP38745 532 aa7.08□□□□□ -1.28
GEF1YJR040W CRG1P38892 291 aaRIP-Chip data7.08□□□□□ -1.28 RIP-Chip
GEF1YJR040W RAD3P06839 778 aa7.07□□□□□ -1.28
GEF1YJR040W PET111P08468 800 aa7.07□□□□□ -1.28
GEF1YJR040W GSY2P27472 705 aa7.07□□□□□ -1.28
GEF1YJR040W RRP8P38961 392 aaKnown RBP7.07□□□□□ -1.28
GEF1YJR040W EPL1P43572 832 aa7.07□□□□□ -1.28
GEF1YJR040W PUS6P53294 404 aa7.07□□□□□ -1.28
GEF1YJR040W TOS4Q06266 489 aa7.07□□□□□ -1.28
GEF1YJR040W MDM38Q08179 573 aa7.07□□□□□ -1.28
GEF1YJR040W FLO1P32768 1537 aa7.07□□□□□ -1.28
GEF1YJR040W FBP26P32604 452 aa7.07□□□□□ -1.28
GEF1YJR040W GLC3P32775 704 aa7.07□□□□□ -1.28
GEF1YJR040W RTS1P38903 757 aa7.07□□□□□ -1.28
GEF1YJR040W YPT11P48559 417 aa7.07□□□□□ -1.28
GEF1YJR040W SPN1Q06505 410 aaPredicted RBP7.07□□□□□ -1.28
GEF1YJR040W GAS5Q08193 484 aa7.07□□□□□ -1.28
GEF1YJR040W MATALPHA2P0CY08 210 aa7.06□□□□□ -1.28
GEF1YJR040W HMLALPHA2P0CY09 210 aa7.06□□□□□ -1.28
GEF1YJR040W PET123P17558 318 aa7.06□□□□□ -1.28
GEF1YJR040W RPT3P33298 428 aaKnown RBP7.06□□□□□ -1.28
GEF1YJR040W PES4P39684 611 aa7.06□□□□□ -1.28
GEF1YJR040W SQS1P53866 767 aaKnown RBP7.06□□□□□ -1.28
GEF1YJR040W CDC15P27636 974 aa7.06□□□□□ -1.28
GEF1YJR040W PEP3P27801 918 aa7.06□□□□□ -1.28
GEF1YJR040W PUP2P32379 260 aa7.06□□□□□ -1.28
GEF1YJR040W AFG2P32794 780 aa7.06□□□□□ -1.28
GEF1YJR040W RGD1P38339 666 aa7.06□□□□□ -1.28
GEF1YJR040W HOT1Q03213 719 aa7.06□□□□□ -1.28
GEF1YJR040W GSM1P42950 618 aa7.05□□□□□ -1.28
GEF1YJR040W CTK3P46963 296 aaPredicted RBP7.05□□□□□ -1.28
GEF1YJR040W YJL171CP46992 396 aa7.05□□□□□ -1.28
GEF1YJR040W VPS30Q02948 557 aa7.05□□□□□ -1.28
GEF1YJR040W RRB1Q04225 511 aaKnown RBP7.05□□□□□ -1.28
GEF1YJR040W PPM2Q08282 695 aa7.05□□□□□ -1.28
GEF1YJR040W YPL260WQ08977 551 aa7.05□□□□□ -1.28
GEF1YJR040W APL4Q12028 832 aa7.05□□□□□ -1.28
GEF1YJR040W RRP43P25359 394 aaPredicted RBP7.05□□□□□ -1.28
GEF1YJR040W RPS7AP26786 190 aaKnown RBP7.05□□□□□ -1.28
GEF1YJR040W ZUO1P32527 433 aaKnown RBP7.05□□□□□ -1.28
GEF1YJR040W RTG2P32608 588 aaKnown RBP7.05□□□□□ -1.28
GEF1YJR040W PCH2P38126 564 aa7.05□□□□□ -1.28
GEF1YJR040W SAP1P39955 897 aaKnown RBP7.05□□□□□ -1.28
GEF1YJR040W PCL8Q08966 492 aa7.05□□□□□ -1.28
GEF1YJR040W FLO11P08640 1367 aa7.04□□□□□ -1.28
GEF1YJR040W RGP1P16664 663 aa7.04□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 982.6 ms