RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W ORC3P54790 616 aa5.38□□□□□ -1.55
SNX4YJL036W UFD2P54860 961 aa5.38□□□□□ -1.55
SNX4YJL036W HTS1P07263 546 aaKnown RBP5.37□□□□□ -1.55
SNX4YJL036W NPR1P22211 790 aa5.37□□□□□ -1.55
SNX4YJL036W ADP1P25371 1049 aa5.37□□□□□ -1.55
SNX4YJL036W ECM2P38241 364 aaKnown RBP5.37□□□□□ -1.55
SNX4YJL036W GIP4P39732 760 aa5.37□□□□□ -1.55
SNX4YJL036W ALT1P52893 592 aa5.37□□□□□ -1.55
SNX4YJL036W RSC4Q02206 625 aa5.37□□□□□ -1.55
SNX4YJL036W CMR1Q12510 522 aaKnown RBP5.37□□□□□ -1.55
SNX4YJL036W MSH4P40965 878 aaPredicted RBP5.36□□□□□ -1.55
SNX4YJL036W RPL34AP87262 121 aaPredicted RBP5.36□□□□□ -1.55
SNX4YJL036W MEC3Q02574 474 aa5.36□□□□□ -1.55
SNX4YJL036W EAR1Q03212 550 aa5.36□□□□□ -1.55
SNX4YJL036W PRP5P21372 849 aaPredicted RBP5.35□□□□□ -1.55
SNX4YJL036W SSY1Q03770 852 aa5.35□□□□□ -1.55
SNX4YJL036W TRE1Q08919 783 aa5.35□□□□□ -1.55
SNX4YJL036W DUR3P33413 735 aa5.34□□□□□ -1.55
SNX4YJL036W GLO3P38682 493 aaKnown RBP5.34□□□□□ -1.55
SNX4YJL036W PEX7P39108 375 aa5.34□□□□□ -1.55
SNX4YJL036W KAR5Q04746 504 aa5.34□□□□□ -1.55
SNX4YJL036W ALG6Q12001 544 aaKnown RBP5.34□□□□□ -1.55
SNX4YJL036W YVC1Q12324 675 aa5.34□□□□□ -1.55
SNX4YJL036W LPX1Q12405 387 aaKnown RBP5.34□□□□□ -1.55
SNX4YJL036W PRP6P19735 899 aaPredicted RBP5.33□□□□□ -1.56
SNX4YJL036W QDR1P40475 563 aa5.33□□□□□ -1.56
SNX4YJL036W REI1P38344 393 aaPredicted RBP5.32□□□□□ -1.56
SNX4YJL036W UTP22P53254 1237 aaPredicted RBP5.32□□□□□ -1.56
SNX4YJL036W PRO1P32264 428 aa5.31□□□□□ -1.56
SNX4YJL036W SLD2P34252 453 aa5.31□□□□□ -1.56
SNX4YJL036W FLR1P38124 548 aa5.31□□□□□ -1.56
SNX4YJL036W ACF4P47129 309 aa5.31□□□□□ -1.56
SNX4YJL036W ATG1P53104 897 aa5.31□□□□□ -1.56
SNX4YJL036W YNL011CP53980 444 aa5.31□□□□□ -1.56
SNX4YJL036W MSH6Q03834 1242 aa5.31□□□□□ -1.56
SNX4YJL036W AIM44Q99299 758 aa5.3□□□□□ -1.56
SNX4YJL036W NFS1P25374 497 aa5.29□□□□□ -1.56
SNX4YJL036W CDC3P32457 520 aaKnown RBP5.29□□□□□ -1.56
SNX4YJL036W SMY2P32909 740 aaKnown RBP5.29□□□□□ -1.56
SNX4YJL036W HDA2Q06629 674 aa5.29□□□□□ -1.56
SNX4YJL036W AIM3P38266 947 aaKnown RBP5.28□□□□□ -1.56
SNX4YJL036W PTC7P38797 343 aa5.28□□□□□ -1.56
SNX4YJL036W SAP155P43612 1002 aa5.28□□□□□ -1.56
SNX4YJL036W YGR045CP53229 120 aa5.28□□□□□ -1.56
SNX4YJL036W ELA1P53861 379 aaPredicted RBP5.28□□□□□ -1.56
SNX4YJL036W TRS120Q04183 1289 aa5.28□□□□□ -1.56
SNX4YJL036W BSC2Q05611 235 aa5.28□□□□□ -1.56
SNX4YJL036W CDC55Q00362 526 aa5.27□□□□□ -1.57
SNX4YJL036W PMT7Q06644 662 aa5.27□□□□□ -1.57
SNX4YJL036W YDL177CQ12257 170 aa5.27□□□□□ -1.57
SNX4YJL036W FLP1P03870 423 aa5.26□□□□□ -1.57
SNX4YJL036W NNK1P36003 928 aa5.26□□□□□ -1.57
SNX4YJL036W ARL1P38116 183 aaKnown RBP5.26□□□□□ -1.57
SNX4YJL036W NOP7P53261 605 aaKnown RBP5.26□□□□□ -1.57
SNX4YJL036W MRPL22P53881 309 aa5.26□□□□□ -1.57
SNX4YJL036W MNL2Q12205 849 aa5.26□□□□□ -1.57
SNX4YJL036W TY1A-LR4P0C2I8 440 aaKnown RBP5.25□□□□□ -1.57
SNX4YJL036W TY1A-DR6P0CX70 440 aa5.25□□□□□ -1.57
SNX4YJL036W TY1A-ER1P0CX71 440 aa5.25□□□□□ -1.57
SNX4YJL036W TY1A-LR2P0CX72 440 aa5.25□□□□□ -1.57
SNX4YJL036W TY1A-PLP0CX73 440 aa5.25□□□□□ -1.57
SNX4YJL036W TY1A-JR1P0CX74 440 aa5.25□□□□□ -1.57
SNX4YJL036W TY1A-LR3P0CX75 440 aa5.25□□□□□ -1.57
SNX4YJL036W TY1A-ML2P0CX76 440 aa5.25□□□□□ -1.57
SNX4YJL036W NUT1P53114 1132 aa5.25□□□□□ -1.57
SNX4YJL036W RIM8P53179 542 aa5.25□□□□□ -1.57
SNX4YJL036W TY1A-GR1Q12085 440 aa5.25□□□□□ -1.57
SNX4YJL036W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.25□□□□□ -1.57
SNX4YJL036W TY1A-OLQ92392 440 aaKnown RBP5.25□□□□□ -1.57
SNX4YJL036W SSF1P38789 453 aaPredicted RBP5.24□□□□□ -1.57
SNX4YJL036W GTS1P40956 396 aa5.24□□□□□ -1.57
SNX4YJL036W YAF9P53930 226 aa5.24□□□□□ -1.57
SNX4YJL036W AVO1Q08236 1176 aa5.24□□□□□ -1.57
SNX4YJL036W RVS167P39743 482 aaKnown RBP5.23□□□□□ -1.57
SNX4YJL036W PUS7Q08647 676 aaKnown RBP5.23□□□□□ -1.57
SNX4YJL036W HAT1Q12341 374 aa5.22□□□□□ -1.57
SNX4YJL036W TRL1P09880 827 aaKnown RBP5.21□□□□□ -1.58
SNX4YJL036W MCM5P29496 775 aaKnown RBP5.21□□□□□ -1.58
SNX4YJL036W YKL077WP36081 392 aa5.21□□□□□ -1.58
SNX4YJL036W ETP1P38748 585 aaKnown RBP5.21□□□□□ -1.58
SNX4YJL036W SNU71P53207 620 aaKnown RBP5.21□□□□□ -1.58
SNX4YJL036W GIS1Q03833 894 aa5.21□□□□□ -1.58
SNX4YJL036W INP54Q08227 384 aaKnown RBP5.21□□□□□ -1.58
SNX4YJL036W SOD2P00447 233 aa5.2□□□□□ -1.58
SNX4YJL036W SHU2P38957 223 aa5.2□□□□□ -1.58
SNX4YJL036W TPP1Q03796 238 aa5.2□□□□□ -1.58
SNX4YJL036W TOD6P34219 525 aa5.18□□□□□ -1.58
SNX4YJL036W EXO5P38289 585 aa5.18□□□□□ -1.58
SNX4YJL036W SLS1P42900 643 aa5.18□□□□□ -1.58
SNX4YJL036W SEN54Q02825 467 aaPredicted RBP5.18□□□□□ -1.58
SNX4YJL036W NOC3Q07896 663 aaPredicted RBP5.18□□□□□ -1.58
SNX4YJL036W YPL277CQ08989 487 aa5.18□□□□□ -1.58
SNX4YJL036W SAM35P14693 329 aa5.17□□□□□ -1.58
SNX4YJL036W HEM3P28789 327 aa5.17□□□□□ -1.58
SNX4YJL036W GRS1P38088 690 aaKnown RBP5.17□□□□□ -1.58
SNX4YJL036W SAM37P50110 327 aa5.17□□□□□ -1.58
SNX4YJL036W MON1P53129 644 aa5.17□□□□□ -1.58
SNX4YJL036W ORC1P54784 914 aaPredicted RBP5.17□□□□□ -1.58
SNX4YJL036W RPS13P05756 151 aaKnown RBP5.16□□□□□ -1.58
SNX4YJL036W NEM1P38757 446 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms