RNA–Protein interactions for RNA: YJL024C

APS3, Transcript of Small subunit of the clathrin-associated adaptor complex AP-3, yeast

Gene APS3, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS3	YJL024C	TFC6	Q06339	672 aa		6.6	□□□□□ -1.35
APS3	YJL024C	ESF1	Q06344	628 aa	Known RBP	6.6	□□□□□ -1.35
APS3	YJL024C	YPL260W	Q08977	551 aa		6.6	□□□□□ -1.35
APS3	YJL024C	CPA2	P03965	1118 aa	Known RBP	6.59	□□□□□ -1.35
APS3	YJL024C	SSA1	P10591	642 aa	Known RBP	6.59	□□□□□ -1.35
APS3	YJL024C	BIK1	P11709	440 aa		6.59	□□□□□ -1.35
APS3	YJL024C	MAK11	P20484	414 aa	Known RBP	6.59	□□□□□ -1.35
APS3	YJL024C	MSM1	P22438	575 aa		6.59	□□□□□ -1.35
APS3	YJL024C	ROX1	P25042	368 aa		6.59	□□□□□ -1.35
APS3	YJL024C	PRO3	P32263	286 aa	Known RBP	6.59	□□□□□ -1.35
APS3	YJL024C	BDH2	P39713	417 aa		6.59	□□□□□ -1.35
APS3	YJL024C	VID27	P40157	782 aa		6.59	□□□□□ -1.35
APS3	YJL024C	YKE2	P52553	114 aa		6.59	□□□□□ -1.35
APS3	YJL024C	EAF7	P53911	425 aa	Known RBP	6.59	□□□□□ -1.35
APS3	YJL024C	ARP5	P53946	755 aa		6.59	□□□□□ -1.35
APS3	YJL024C	TRM44	Q02648	567 aa	Known RBP	6.59	□□□□□ -1.35
APS3	YJL024C	CRF1	Q04930	467 aa		6.59	□□□□□ -1.35
APS3	YJL024C	MRD1	Q06106	887 aa	Known RBP	6.59	□□□□□ -1.35
APS3	YJL024C	RAD61	Q99359	647 aa		6.59	□□□□□ -1.35
APS3	YJL024C	YLR278C	Q05854	1341 aa		6.58	□□□□□ -1.36
APS3	YJL024C	TTI1	P36097	1038 aa		6.58	□□□□□ -1.36
APS3	YJL024C	YHL017W	P38745	532 aa		6.58	□□□□□ -1.36
APS3	YJL024C	SNF7	P39929	240 aa	Known RBP	6.58	□□□□□ -1.36
APS3	YJL024C	EPL1	P43572	832 aa		6.58	□□□□□ -1.36
APS3	YJL024C	HST1	P53685	503 aa		6.58	□□□□□ -1.36
APS3	YJL024C	KEL3	Q08979	651 aa	Predicted RBP	6.58	□□□□□ -1.36
APS3	YJL024C	ELG1	Q12050	791 aa		6.58	□□□□□ -1.36
APS3	YJL024C	YPL150W	Q12152	901 aa		6.58	□□□□□ -1.36
APS3	YJL024C	MPH3	P0CE00	602 aa		6.57	□□□□□ -1.36
APS3	YJL024C	MBR1	P23493	339 aa		6.57	□□□□□ -1.36
APS3	YJL024C	RIT1	P23796	513 aa		6.57	□□□□□ -1.36
APS3	YJL024C	GUT1	P32190	709 aa		6.57	□□□□□ -1.36
APS3	YJL024C	GLC3	P32775	704 aa		6.57	□□□□□ -1.36
APS3	YJL024C	PRX1	P34227	261 aa	Known RBP	6.57	□□□□□ -1.36
APS3	YJL024C	SOL3	P38858	249 aa		6.57	□□□□□ -1.36
APS3	YJL024C	AKR1	P39010	764 aa		6.57	□□□□□ -1.36
APS3	YJL024C	CSM2	P40465	213 aa		6.57	□□□□□ -1.36
APS3	YJL024C	HYR1	P40581	163 aa	Known RBP	6.57	□□□□□ -1.36
APS3	YJL024C	MSH4	P40965	878 aa	Predicted RBP	6.57	□□□□□ -1.36
APS3	YJL024C	FET4	P40988	552 aa		6.57	□□□□□ -1.36
APS3	YJL024C	ENT3	P47160	408 aa		6.57	□□□□□ -1.36
APS3	YJL024C	ATH1	P48016	1211 aa		6.57	□□□□□ -1.36
APS3	YJL024C	YGL081W	P53156	320 aa		6.57	□□□□□ -1.36
APS3	YJL024C	HAP5	Q02516	242 aa		6.57	□□□□□ -1.36
APS3	YJL024C	TIM50	Q02776	476 aa		6.57	□□□□□ -1.36
APS3	YJL024C	PSK2	Q08217	1101 aa		6.57	□□□□□ -1.36
APS3	YJL024C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	6.56	□□□□□ -1.36	not detected
APS3	YJL024C	MAK31	P23059	88 aa		6.56	□□□□□ -1.36
APS3	YJL024C	VRP1	P37370	817 aa		6.56	□□□□□ -1.36
APS3	YJL024C	SLI15	P38283	698 aa		6.56	□□□□□ -1.36
APS3	YJL024C	MID1	P41821	548 aa		6.56	□□□□□ -1.36
APS3	YJL024C	CIR1	P42940	261 aa		6.56	□□□□□ -1.36
APS3	YJL024C	YGR117C	P53270	476 aa		6.56	□□□□□ -1.36
APS3	YJL024C	SEN54	Q02825	467 aa	Predicted RBP	6.56	□□□□□ -1.36
APS3	YJL024C	MYO5	Q04439	1219 aa	Known RBP	6.56	□□□□□ -1.36
APS3	YJL024C	PCL8	Q08966	492 aa		6.56	□□□□□ -1.36
APS3	YJL024C	YOR111W	Q99210	232 aa		6.56	□□□□□ -1.36
APS3	YJL024C	THS1	P04801	734 aa	Known RBP	6.55	□□□□□ -1.36
APS3	YJL024C	HPR1	P17629	752 aa	Known RBP	6.55	□□□□□ -1.36
APS3	YJL024C	PRE8	P23639	250 aa		6.55	□□□□□ -1.36
APS3	YJL024C	SIS2	P36024	562 aa		6.55	□□□□□ -1.36
APS3	YJL024C	BUD6	P41697	788 aa		6.55	□□□□□ -1.36
APS3	YJL024C	PEX19	Q07418	342 aa		6.55	□□□□□ -1.36
APS3	YJL024C	KIN1	P13185	1064 aa		6.54	□□□□□ -1.36
APS3	YJL024C	CBP3	P21560	335 aa		6.54	□□□□□ -1.36
APS3	YJL024C	DIT2	P21595	489 aa		6.54	□□□□□ -1.36
APS3	YJL024C	RNR3	P21672	869 aa	Known RBP	6.54	□□□□□ -1.36
APS3	YJL024C	SRM1	P21827	482 aa		6.54	□□□□□ -1.36
APS3	YJL024C	SWI4	P25302	1093 aa	Known RBP	6.54	□□□□□ -1.36
APS3	YJL024C	ADP1	P25371	1049 aa		6.54	□□□□□ -1.36
APS3	YJL024C	SPB4	P25808	606 aa	Predicted RBP	6.54	□□□□□ -1.36
APS3	YJL024C	CHS3	P29465	1165 aa		6.54	□□□□□ -1.36
APS3	YJL024C	RTG2	P32608	588 aa	Known RBP	6.54	□□□□□ -1.36
APS3	YJL024C	BMH2	P34730	273 aa	Known RBP	6.54	□□□□□ -1.36
APS3	YJL024C	MAL33	P38157	468 aa		6.54	□□□□□ -1.36
APS3	YJL024C	RFC5	P38251	354 aa		6.54	□□□□□ -1.36
APS3	YJL024C	KEL1	P38853	1164 aa	Known RBP	6.54	□□□□□ -1.36
APS3	YJL024C	RPN10	P38886	268 aa	Known RBP	6.54	□□□□□ -1.36
APS3	YJL024C	VPS8	P39702	1274 aa		6.54	□□□□□ -1.36
APS3	YJL024C	PEX14	P53112	341 aa		6.54	□□□□□ -1.36
APS3	YJL024C	RPT6	Q01939	405 aa	Known RBP	6.54	□□□□□ -1.36
APS3	YJL024C	SKG3	Q06315	1026 aa		6.54	□□□□□ -1.36
APS3	YJL024C	GSC2	P40989	1895 aa		6.53	□□□□□ -1.36
APS3	YJL024C	CBP1	P07252	654 aa		6.53	□□□□□ -1.36
APS3	YJL024C	KEX1	P09620	729 aa		6.53	□□□□□ -1.36
APS3	YJL024C	SRP54	P20424	541 aa	Known RBP	6.53	□□□□□ -1.36
APS3	YJL024C	RAD53	P22216	821 aa		6.53	□□□□□ -1.36
APS3	YJL024C	RDS1	P25611	832 aa		6.53	□□□□□ -1.36
APS3	YJL024C	COQ8	P27697	501 aa		6.53	□□□□□ -1.36
APS3	YJL024C	EMP47	P43555	445 aa		6.53	□□□□□ -1.36
APS3	YJL024C	KRE33	P53914	1056 aa	Known RBP	6.53	□□□□□ -1.36
APS3	YJL024C	ELP4	Q02884	456 aa	Known RBP	6.53	□□□□□ -1.36
APS3	YJL024C	YPR148C	Q06523	435 aa		6.53	□□□□□ -1.36
APS3	YJL024C	YDL124W	Q07551	312 aa	Known RBP	6.53	□□□□□ -1.36
APS3	YJL024C	TUS1	Q06412	1307 aa		6.52	□□□□□ -1.37
APS3	YJL024C	TUB2	P02557	457 aa	Known RBP	6.52	□□□□□ -1.37
APS3	YJL024C	PMA1	P05030	918 aa	Known RBP	6.52	□□□□□ -1.37
APS3	YJL024C	CDC6	P09119	513 aa		6.52	□□□□□ -1.37
APS3	YJL024C	FRS2	P15625	503 aa	Known RBP	6.52	□□□□□ -1.37
APS3	YJL024C	HCA4	P20448	770 aa	Known RBP	6.52	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms