RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C RAD55P38953 406 aa6.31□□□□□ -1.4
SDS3YIL084C MED7Q08278 222 aa6.31□□□□□ -1.4
SDS3YIL084C KTR2P33550 425 aa6.3□□□□□ -1.4
SDS3YIL084C NTA1P40354 457 aa6.3□□□□□ -1.4
SDS3YIL084C COQ2P32378 372 aa6.29□□□□□ -1.4
SDS3YIL084C KAE1P36132 386 aa6.29□□□□□ -1.4
SDS3YIL084C BSD2P38356 321 aa6.29□□□□□ -1.4
SDS3YIL084C YNL011CP53980 444 aa6.29□□□□□ -1.4
SDS3YIL084C WHI5Q12416 295 aa6.29□□□□□ -1.4
SDS3YIL084C IRS4P36115 615 aaKnown RBP6.28□□□□□ -1.4
SDS3YIL084C CDC55Q00362 526 aa6.28□□□□□ -1.4
SDS3YIL084C TY4B-PA0A0B7P3V8 1104 aa6.27□□□□□ -1.41
SDS3YIL084C LIP5P32875 414 aa6.27□□□□□ -1.41
SDS3YIL084C TOS1P38288 455 aa6.27□□□□□ -1.41
SDS3YIL084C TED1P40533 473 aa6.27□□□□□ -1.41
SDS3YIL084C RGD2P43556 714 aa6.27□□□□□ -1.41
SDS3YIL084C ITC1P53125 1264 aa6.27□□□□□ -1.41
SDS3YIL084C TY4A-HQ6Q5P6 413 aa6.27□□□□□ -1.41
SDS3YIL084C AIM46P38885 310 aa6.26□□□□□ -1.41
SDS3YIL084C PSY2P40164 858 aa6.26□□□□□ -1.41
SDS3YIL084C POL32P47110 350 aa6.26□□□□□ -1.41
SDS3YIL084C RSC4Q02206 625 aa6.26□□□□□ -1.41
SDS3YIL084C MNL2Q12205 849 aa6.26□□□□□ -1.41
SDS3YIL084C TY1A-NL1Q12391 440 aaKnown RBP6.26□□□□□ -1.41
SDS3YIL084C TIF6Q12522 245 aaKnown RBP6.26□□□□□ -1.41
SDS3YIL084C TRM732Q03496 1420 aa6.25□□□□□ -1.41
SDS3YIL084C DNF2Q12675 1612 aa6.25□□□□□ -1.41
SDS3YIL084C GCD6P32501 712 aaKnown RBP6.25□□□□□ -1.41
SDS3YIL084C MGE1P38523 228 aa6.25□□□□□ -1.41
SDS3YIL084C SAM37P50110 327 aa6.25□□□□□ -1.41
SDS3YIL084C YGR130CP53278 816 aa6.25□□□□□ -1.41
SDS3YIL084C BSC2Q05611 235 aa6.25□□□□□ -1.41
SDS3YIL084C DRS2P39524 1355 aa6.25□□□□□ -1.41
SDS3YIL084C MMS22Q06164 1454 aa6.24□□□□□ -1.41
SDS3YIL084C NAM7P30771 971 aaKnown RBP6.24□□□□□ -1.41
SDS3YIL084C MET4P32389 672 aa6.24□□□□□ -1.41
SDS3YIL084C GPI13Q07830 1017 aa6.24□□□□□ -1.41
SDS3YIL084C VPS15P22219 1454 aa6.23□□□□□ -1.41
SDS3YIL084C RSC6P25632 483 aa6.23□□□□□ -1.41
SDS3YIL084C PUB1P32588 453 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
SDS3YIL084C SAF1P38352 637 aa6.23□□□□□ -1.41
SDS3YIL084C CIC1P38779 376 aaKnown RBP6.23□□□□□ -1.41
SDS3YIL084C GIP2P40036 548 aa6.23□□□□□ -1.41
SDS3YIL084C SNU71P53207 620 aaKnown RBP6.23□□□□□ -1.41
SDS3YIL084C YIL165CP40446 119 aa6.22□□□□□ -1.41
SDS3YIL084C SOK2P53438 785 aaPredicted RBP6.22□□□□□ -1.41
SDS3YIL084C EMG1Q06287 252 aaKnown RBP6.22□□□□□ -1.41
SDS3YIL084C BRE4Q07660 1125 aa6.22□□□□□ -1.41
SDS3YIL084C NOC3Q07896 663 aaPredicted RBP6.22□□□□□ -1.41
SDS3YIL084C NUP159P40477 1460 aa6.22□□□□□ -1.41
SDS3YIL084C TY1B-JR2P47100 1755 aaKnown RBP6.21□□□□□ -1.41
SDS3YIL084C TY1B-ER2Q03619 1755 aa6.21□□□□□ -1.41
SDS3YIL084C TY1B-MR1Q04214 1755 aa6.21□□□□□ -1.41
SDS3YIL084C TY1B-MR2Q04670 1755 aaKnown RBP6.21□□□□□ -1.41
SDS3YIL084C TY1B-LR1Q12088 1755 aaKnown RBP6.21□□□□□ -1.41
SDS3YIL084C TY1B-NL1Q12112 1755 aa6.21□□□□□ -1.41
SDS3YIL084C TY1B-GR1Q12141 1755 aa6.21□□□□□ -1.41
SDS3YIL084C TY1B-BLQ12490 1755 aa6.21□□□□□ -1.41
SDS3YIL084C NTE1Q04958 1679 aa6.21□□□□□ -1.42
SDS3YIL084C PHO4P07270 312 aaKnown RBP6.21□□□□□ -1.42
SDS3YIL084C ECM2P38241 364 aaKnown RBP6.21□□□□□ -1.42
SDS3YIL084C AKR1P39010 764 aa6.21□□□□□ -1.42
SDS3YIL084C RSC2Q06488 889 aa6.21□□□□□ -1.42
SDS3YIL084C VPS35P34110 944 aa6.2□□□□□ -1.42
SDS3YIL084C YHL008CP38750 627 aa6.2□□□□□ -1.42
SDS3YIL084C YER156CP40093 338 aaKnown RBP6.2□□□□□ -1.42
SDS3YIL084C OXR1Q08952 273 aa6.2□□□□□ -1.42
SDS3YIL084C SLP1Q12232 587 aa6.2□□□□□ -1.42
SDS3YIL084C TOP2P06786 1428 aaKnown RBP6.19□□□□□ -1.42
SDS3YIL084C ATE1P16639 503 aa6.19□□□□□ -1.42
SDS3YIL084C RRP15Q06511 250 aaPredicted RBP6.19□□□□□ -1.42
SDS3YIL084C RPT1P33299 467 aaKnown RBP6.18□□□□□ -1.42
SDS3YIL084C DAK2P43550 591 aa6.18□□□□□ -1.42
SDS3YIL084C MAG2Q06436 670 aaKnown RBP6.18□□□□□ -1.42
SDS3YIL084C AOS1Q06624 347 aa6.18□□□□□ -1.42
SDS3YIL084C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
SDS3YIL084C INP54Q08227 384 aaKnown RBP6.18□□□□□ -1.42
SDS3YIL084C RPO21P04050 1733 aaKnown RBP6.17□□□□□ -1.42
SDS3YIL084C CHS2P14180 963 aa6.17□□□□□ -1.42
SDS3YIL084C PPT1P53043 513 aa6.17□□□□□ -1.42
SDS3YIL084C DOP1Q03921 1698 aa6.17□□□□□ -1.42
SDS3YIL084C ELM1P32801 640 aa6.16□□□□□ -1.42
SDS3YIL084C SEA4P38164 1038 aa6.16□□□□□ -1.42
SDS3YIL084C NOP7P53261 605 aaKnown RBP6.16□□□□□ -1.42
SDS3YIL084C REC8Q12188 680 aa6.16□□□□□ -1.42
SDS3YIL084C FLP1P03870 423 aa6.15□□□□□ -1.42
SDS3YIL084C PYC2P32327 1180 aaKnown RBP6.15□□□□□ -1.42
SDS3YIL084C YJL181WP46987 611 aa6.15□□□□□ -1.42
SDS3YIL084C CYC7P00045 113 aa6.14□□□□□ -1.43
SDS3YIL084C SEC8P32855 1065 aa6.14□□□□□ -1.43
SDS3YIL084C YJR107WP47145 328 aa6.14□□□□□ -1.43
SDS3YIL084C OYE2Q03558 400 aaKnown RBP6.14□□□□□ -1.43
SDS3YIL084C YCS4Q06156 1176 aa6.14□□□□□ -1.43
SDS3YIL084C FUS1P11710 512 aa6.13□□□□□ -1.43
SDS3YIL084C CTR9P89105 1077 aa6.13□□□□□ -1.43
SDS3YIL084C YOR093CQ12275 1648 aa6.13□□□□□ -1.43
SDS3YIL084C KAR2P16474 682 aaKnown RBP6.12□□□□□ -1.43
SDS3YIL084C RNQ1P25367 405 aa6.12□□□□□ -1.43
SDS3YIL084C NUP170P38181 1502 aa6.12□□□□□ -1.43
SDS3YIL084C SPP41P38904 1435 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms