RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W MEC3Q02574 474 aa3.87□□□□□ -1.79
URM1YIL008W SEN54Q02825 467 aaPredicted RBP3.87□□□□□ -1.79
URM1YIL008W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
URM1YIL008W YOR223WQ12015 292 aa3.87□□□□□ -1.79
URM1YIL008W YLR122CQ12312 125 aa3.87□□□□□ -1.79
URM1YIL008W WHI5Q12416 295 aa3.87□□□□□ -1.79
URM1YIL008W CHS2P14180 963 aa3.86□□□□□ -1.79
URM1YIL008W IPL1P38991 367 aa3.86□□□□□ -1.79
URM1YIL008W DAK2P43550 591 aa3.86□□□□□ -1.79
URM1YIL008W ALO1P54783 526 aaKnown RBP3.86□□□□□ -1.79
URM1YIL008W GIC2Q06648 383 aa3.86□□□□□ -1.79
URM1YIL008W PRP40P33203 583 aaKnown RBP3.85□□□□□ -1.79
URM1YIL008W YKL077WP36081 392 aa3.85□□□□□ -1.79
URM1YIL008W ARL1P38116 183 aaKnown RBP3.85□□□□□ -1.79
URM1YIL008W REI1P38344 393 aaPredicted RBP3.85□□□□□ -1.79
URM1YIL008W SHU2P38957 223 aa3.85□□□□□ -1.79
URM1YIL008W YML020WQ03722 664 aa3.85□□□□□ -1.79
URM1YIL008W MED7Q08278 222 aa3.85□□□□□ -1.79
URM1YIL008W OXR1Q08952 273 aa3.85□□□□□ -1.79
URM1YIL008W TRP3P00937 484 aa3.84□□□□□ -1.79
URM1YIL008W KAR2P16474 682 aaKnown RBP3.84□□□□□ -1.79
URM1YIL008W MSB1P21339 1137 aaKnown RBP3.84□□□□□ -1.79
URM1YIL008W GPT2P36148 743 aa3.84□□□□□ -1.79
URM1YIL008W YGR130CP53278 816 aa3.84□□□□□ -1.79
URM1YIL008W NOG1Q02892 647 aaKnown RBP3.84□□□□□ -1.79
URM1YIL008W DOT1Q04089 582 aaKnown RBP3.84□□□□□ -1.79
URM1YIL008W DAL4Q04895 635 aa3.84□□□□□ -1.79
URM1YIL008W TY1A-LR4P0C2I8 440 aaKnown RBP3.83□□□□□ -1.8
URM1YIL008W TY1A-DR6P0CX70 440 aa3.83□□□□□ -1.8
URM1YIL008W TY1A-ER1P0CX71 440 aa3.83□□□□□ -1.8
URM1YIL008W TY1A-LR2P0CX72 440 aa3.83□□□□□ -1.8
URM1YIL008W TY1A-PLP0CX73 440 aa3.83□□□□□ -1.8
URM1YIL008W TY1A-JR1P0CX74 440 aa3.83□□□□□ -1.8
URM1YIL008W TY1A-LR3P0CX75 440 aa3.83□□□□□ -1.8
URM1YIL008W TY1A-ML2P0CX76 440 aa3.83□□□□□ -1.8
URM1YIL008W MAC1P35192 417 aa3.83□□□□□ -1.8
URM1YIL008W OMA1P36163 345 aa3.83□□□□□ -1.8
URM1YIL008W EXO5P38289 585 aa3.83□□□□□ -1.8
URM1YIL008W SPO74P45819 413 aa3.83□□□□□ -1.8
URM1YIL008W NOP8Q08287 484 aaPredicted RBP3.83□□□□□ -1.8
URM1YIL008W ALG6Q12001 544 aaKnown RBP3.83□□□□□ -1.8
URM1YIL008W TY1A-GR1Q12085 440 aa3.83□□□□□ -1.8
URM1YIL008W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.83□□□□□ -1.8
URM1YIL008W TY1A-OLQ92392 440 aaKnown RBP3.83□□□□□ -1.8
URM1YIL008W UGA4P32837 571 aa3.82□□□□□ -1.8
URM1YIL008W RPT1P33299 467 aaKnown RBP3.82□□□□□ -1.8
URM1YIL008W YKR073CP36153 106 aa3.82□□□□□ -1.8
URM1YIL008W SLS1P42900 643 aa3.82□□□□□ -1.8
URM1YIL008W INP52P50942 1183 aa3.82□□□□□ -1.8
URM1YIL008W ULP1Q02724 621 aa3.82□□□□□ -1.8
URM1YIL008W TOS4Q06266 489 aa3.82□□□□□ -1.8
URM1YIL008W AVO1Q08236 1176 aa3.82□□□□□ -1.8
URM1YIL008W MSH3P25336 1018 aa3.81□□□□□ -1.8
URM1YIL008W SQT1P35184 431 aa3.81□□□□□ -1.8
URM1YIL008W MMM1P41800 426 aa3.81□□□□□ -1.8
URM1YIL008W RSM26P47141 266 aa3.81□□□□□ -1.8
URM1YIL008W YGR045CP53229 120 aa3.81□□□□□ -1.8
URM1YIL008W PEX13P80667 386 aa3.81□□□□□ -1.8
URM1YIL008W CYC7P00045 113 aa3.8□□□□□ -1.8
URM1YIL008W HXK1P04806 485 aaKnown RBP3.8□□□□□ -1.8
URM1YIL008W HEM3P28789 327 aa3.8□□□□□ -1.8
URM1YIL008W PUB1P32588 453 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
URM1YIL008W TOS1P38288 455 aa3.8□□□□□ -1.8
URM1YIL008W NEM1P38757 446 aa3.8□□□□□ -1.8
URM1YIL008W MSH4P40965 878 aaPredicted RBP3.8□□□□□ -1.8
URM1YIL008W MTR4P47047 1073 aaKnown RBP3.8□□□□□ -1.8
URM1YIL008W ELA1P53861 379 aaPredicted RBP3.8□□□□□ -1.8
URM1YIL008W YPL109CQ02981 657 aa3.8□□□□□ -1.8
URM1YIL008W ADI1Q03677 179 aa3.8□□□□□ -1.8
URM1YIL008W RPS4AP0CX35 261 aaKnown RBP3.79□□□□□ -1.8
URM1YIL008W RPS4BP0CX36 261 aaKnown RBP3.79□□□□□ -1.8
URM1YIL008W VMA4P22203 233 aaKnown RBP3.79□□□□□ -1.8
URM1YIL008W WHI3P34761 661 aaKnown RBP3.79□□□□□ -1.8
URM1YIL008W NNK1P36003 928 aa3.79□□□□□ -1.8
URM1YIL008W MGE1P38523 228 aa3.79□□□□□ -1.8
URM1YIL008W PEX28P38848 579 aa3.79□□□□□ -1.8
URM1YIL008W FAA3P39002 694 aa3.79□□□□□ -1.8
URM1YIL008W CIT3P43635 486 aa3.79□□□□□ -1.8
URM1YIL008W POL32P47110 350 aa3.79□□□□□ -1.8
URM1YIL008W ALT1P52893 592 aa3.79□□□□□ -1.8
URM1YIL008W UTP5Q04177 643 aaKnown RBP3.79□□□□□ -1.8
URM1YIL008W YOR059CQ08448 450 aaKnown RBP3.79□□□□□ -1.8
URM1YIL008W NFS1P25374 497 aa3.78□□□□□ -1.8
URM1YIL008W LIP5P32875 414 aa3.78□□□□□ -1.8
URM1YIL008W SMY2P32909 740 aaKnown RBP3.78□□□□□ -1.8
URM1YIL008W CTH1P47976 325 aa3.78□□□□□ -1.8
URM1YIL008W YGL140CP53120 1219 aa3.78□□□□□ -1.8
URM1YIL008W RCM1P53972 490 aa3.78□□□□□ -1.8
URM1YIL008W BRE4Q07660 1125 aa3.78□□□□□ -1.8
URM1YIL008W NSI1Q12457 570 aa3.78□□□□□ -1.8
URM1YIL008W ATE1P16639 503 aa3.77□□□□□ -1.81
URM1YIL008W RDH54P38086 958 aa3.77□□□□□ -1.81
URM1YIL008W YAR028WP39548 234 aa3.77□□□□□ -1.81
URM1YIL008W XKS1P42826 600 aa3.77□□□□□ -1.81
URM1YIL008W MRPS18P42847 217 aa3.77□□□□□ -1.81
URM1YIL008W YGR122WP53272 402 aa3.77□□□□□ -1.81
URM1YIL008W MAG2Q06436 670 aaKnown RBP3.77□□□□□ -1.81
URM1YIL008W LAP2Q10740 671 aa3.77□□□□□ -1.81
URM1YIL008W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
URM1YIL008W GCD1P09032 578 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms