RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeastyeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP1YGR178C VPS8P39702 1274 aa11□□□□□ -0.65
PBP1YGR178C KRS1P15180 591 aaKnown RBP11□□□□□ -0.65
PBP1YGR178C DIT2P21595 489 aa11□□□□□ -0.65
PBP1YGR178C PAP1P29468 568 aaKnown RBP11□□□□□ -0.65
PBP1YGR178C YET1P35723 206 aa11□□□□□ -0.65
PBP1YGR178C YKR018CP36114 725 aa11□□□□□ -0.65
PBP1YGR178C ERG5P54781 538 aa11□□□□□ -0.65
PBP1YGR178C VPS64Q03944 604 aa11□□□□□ -0.65
PBP1YGR178C NUR1Q12066 484 aa11□□□□□ -0.65
PBP1YGR178C MTF2P10849 440 aa10.99□□□□□ -0.65
PBP1YGR178C ARG1P22768 420 aa10.99□□□□□ -0.65
PBP1YGR178C PDB1P32473 366 aaKnown RBP10.99□□□□□ -0.65
PBP1YGR178C OLA1P38219 394 aaKnown RBP10.99□□□□□ -0.65
PBP1YGR178C EIS1Q05050 843 aaKnown RBP10.99□□□□□ -0.65
PBP1YGR178C CNS1P33313 385 aa10.99□□□□□ -0.65
PBP1YGR178C MRX1P40050 688 aa10.99□□□□□ -0.65
PBP1YGR178C EFM4P40516 257 aa10.99□□□□□ -0.65
PBP1YGR178C RRP6Q12149 733 aaKnown RBP10.99□□□□□ -0.65
PBP1YGR178C RMP1Q12530 201 aa10.99□□□□□ -0.65
PBP1YGR178C AI2P03876 854 aa10.98□□□□□ -0.65
PBP1YGR178C EFM2P38347 419 aa10.98□□□□□ -0.65
PBP1YGR178C FYV8P46949 817 aaKnown RBP10.98□□□□□ -0.65
PBP1YGR178C NOP6Q07623 225 aaKnown RBP10.98□□□□□ -0.65
PBP1YGR178C HMI1Q12039 706 aa10.98□□□□□ -0.65
PBP1YGR178C CDC8P00572 216 aa10.97□□□□□ -0.65
PBP1YGR178C CDC37P06101 506 aaKnown RBP10.97□□□□□ -0.65
PBP1YGR178C GAL11P19659 1081 aa10.97□□□□□ -0.65
PBP1YGR178C SHQ1P40486 507 aaPredicted RBP10.97□□□□□ -0.65
PBP1YGR178C YJR008WP47085 338 aa10.97□□□□□ -0.65
PBP1YGR178C YLR001CQ07895 862 aa10.97□□□□□ -0.65
PBP1YGR178C TY4A-HQ6Q5P6 413 aa10.97□□□□□ -0.65
PBP1YGR178C MRPS28P21771 286 aa10.96□□□□□ -0.65
PBP1YGR178C URA1P28272 314 aaPredicted RBP10.96□□□□□ -0.65
PBP1YGR178C DCS2Q12123 353 aa10.96□□□□□ -0.65
PBP1YGR178C MAK11P20484 414 aaKnown RBP10.96□□□□□ -0.66
PBP1YGR178C HOS4P40480 1083 aa10.96□□□□□ -0.66
PBP1YGR178C ILM1P47155 203 aa10.96□□□□□ -0.66
PBP1YGR178C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.96□□□□□ -0.66not detected
PBP1YGR178C UTP10P42945 1769 aaKnown RBP10.95□□□□□ -0.66
PBP1YGR178C RPL22AP05749 121 aaKnown RBP10.95□□□□□ -0.66
PBP1YGR178C SPO12P17123 173 aa10.95□□□□□ -0.66
PBP1YGR178C CTM1P38818 585 aa10.95□□□□□ -0.66
PBP1YGR178C PFK2P16862 959 aaKnown RBP RIP-Chip data10.94□□□□□ -0.66not detected
PBP1YGR178C RAD57P25301 460 aa10.94□□□□□ -0.66
PBP1YGR178C RPN10P38886 268 aaKnown RBP10.94□□□□□ -0.66
PBP1YGR178C HUL5P53119 910 aa10.94□□□□□ -0.66
PBP1YGR178C PXR1P53335 271 aaPredicted RBP10.94□□□□□ -0.66
PBP1YGR178C SEC5P89102 971 aa10.94□□□□□ -0.66
PBP1YGR178C NGL3Q03210 505 aa10.94□□□□□ -0.66
PBP1YGR178C OPI1P21957 404 aa10.94□□□□□ -0.66
PBP1YGR178C SRB4P32569 687 aa10.94□□□□□ -0.66
PBP1YGR178C YGR237CP50089 785 aa10.94□□□□□ -0.66
PBP1YGR178C CUE3P53137 624 aaKnown RBP10.94□□□□□ -0.66
PBP1YGR178C YLR287CQ05881 355 aa10.94□□□□□ -0.66
PBP1YGR178C RCR1P38212 213 aa10.93□□□□□ -0.66
PBP1YGR178C YMR147WP40218 223 aaKnown RBP10.93□□□□□ -0.66
PBP1YGR178C ALD3P54114 506 aa10.93□□□□□ -0.66
PBP1YGR178C PLP2Q12017 286 aa10.93□□□□□ -0.66
PBP1YGR178C UTP5Q04177 643 aaKnown RBP10.93□□□□□ -0.66
PBP1YGR178C OSH3P38713 996 aaKnown RBP10.92□□□□□ -0.66
PBP1YGR178C NCS2P53923 493 aaPredicted RBP10.92□□□□□ -0.66
PBP1YGR178C ADA2Q02336 434 aa10.92□□□□□ -0.66
PBP1YGR178C UBX2Q04228 584 aa10.92□□□□□ -0.66
PBP1YGR178C SLP1Q12232 587 aa10.92□□□□□ -0.66
PBP1YGR178C GYP5Q12344 894 aa10.92□□□□□ -0.66
PBP1YGR178C SEC8P32855 1065 aa10.92□□□□□ -0.66
PBP1YGR178C LSC2P53312 427 aa10.92□□□□□ -0.66
PBP1YGR178C MEC3Q02574 474 aa10.92□□□□□ -0.66
PBP1YGR178C UME1Q03010 460 aa10.92□□□□□ -0.66
PBP1YGR178C PKH3Q03306 898 aaPredicted RBP10.92□□□□□ -0.66
PBP1YGR178C LAM4P38800 1345 aa10.92□□□□□ -0.66
PBP1YGR178C CDC6P09119 513 aa10.91□□□□□ -0.66
PBP1YGR178C CBP3P21560 335 aa10.91□□□□□ -0.66
PBP1YGR178C SKI2P35207 1287 aaKnown RBP RIP-Chip data10.91□□□□□ -0.66not detected
PBP1YGR178C YMR124WP39523 943 aaKnown RBP10.91□□□□□ -0.66
PBP1YGR178C EBS1Q03466 884 aaKnown RBP10.91□□□□□ -0.66
PBP1YGR178C DPL1Q05567 589 aa10.91□□□□□ -0.66
PBP1YGR178C INP54Q08227 384 aaKnown RBP10.91□□□□□ -0.66
PBP1YGR178C VPS1P21576 704 aaKnown RBP10.9□□□□□ -0.66
PBP1YGR178C SPO11P23179 398 aa10.9□□□□□ -0.66
PBP1YGR178C LOS1P33418 1100 aaPredicted RBP10.9□□□□□ -0.66
PBP1YGR178C SIP3P38717 1229 aa10.9□□□□□ -0.66
PBP1YGR178C ARG4P04076 463 aaPredicted RBP10.9□□□□□ -0.66
PBP1YGR178C TOM70P07213 617 aaKnown RBP10.9□□□□□ -0.66
PBP1YGR178C RAD5P32849 1169 aaPredicted RBP10.9□□□□□ -0.66
PBP1YGR178C APL2P36000 726 aaPredicted RBP10.9□□□□□ -0.66
PBP1YGR178C RPG1P38249 964 aaKnown RBP10.9□□□□□ -0.66
PBP1YGR178C MIP6P38760 659 aaKnown RBP10.9□□□□□ -0.66
PBP1YGR178C SET1P38827 1080 aaKnown RBP10.9□□□□□ -0.66
PBP1YGR178C PXA1P41909 870 aa10.9□□□□□ -0.66
PBP1YGR178C ZPR1P53303 486 aaKnown RBP10.9□□□□□ -0.66
PBP1YGR178C GRX3Q03835 250 aa10.9□□□□□ -0.66
PBP1YGR178C SOV1Q04748 898 aa10.9□□□□□ -0.66
PBP1YGR178C YLR177WQ06251 628 aa10.9□□□□□ -0.66
PBP1YGR178C CSC1Q06538 782 aa10.9□□□□□ -0.66
PBP1YGR178C AKR1P39010 764 aa10.89□□□□□ -0.67
PBP1YGR178C CUS1Q02554 436 aaPredicted RBP10.89□□□□□ -0.67
PBP1YGR178C TFB2Q02939 513 aa10.89□□□□□ -0.67
PBP1YGR178C FAS2P19097 1887 aaKnown RBP10.89□□□□□ -0.67
PBP1YGR178C CKI1P20485 582 aa10.89□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms