RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	ARE1	P25628	610 aa		3.91	□□□□□ -1.78
CCM1	YGR150C	IRR1	P40541	1150 aa		3.91	□□□□□ -1.78
CCM1	YGR150C	MTR4	P47047	1073 aa	Known RBP	3.91	□□□□□ -1.78
CCM1	YGR150C	YML131W	Q03102	365 aa		3.91	□□□□□ -1.78
CCM1	YGR150C	AGE1	Q04412	482 aa		3.91	□□□□□ -1.78
CCM1	YGR150C	INP54	Q08227	384 aa	Known RBP	3.91	□□□□□ -1.78
CCM1	YGR150C	HTA1	P04911	132 aa	Known RBP	3.91	□□□□□ -1.78
CCM1	YGR150C	HTA2	P04912	132 aa		3.91	□□□□□ -1.78
CCM1	YGR150C	PRP40	P33203	583 aa	Known RBP	3.91	□□□□□ -1.78
CCM1	YGR150C	RRN3	P36070	627 aa		3.91	□□□□□ -1.78
CCM1	YGR150C	BET3	P36149	193 aa		3.91	□□□□□ -1.78
CCM1	YGR150C	GEM1	P39722	662 aa		3.91	□□□□□ -1.78
CCM1	YGR150C	ALA1	P40825	983 aa	Known RBP	3.91	□□□□□ -1.78
CCM1	YGR150C	YPL109C	Q02981	657 aa		3.91	□□□□□ -1.78
CCM1	YGR150C	TRE2	Q08693	809 aa		3.91	□□□□□ -1.78
CCM1	YGR150C	RRP6	Q12149	733 aa	Known RBP	3.91	□□□□□ -1.78
CCM1	YGR150C	SBP1	P10080	294 aa	Known RBP	3.9	□□□□□ -1.78
CCM1	YGR150C	TFC4	P33339	1025 aa		3.9	□□□□□ -1.78
CCM1	YGR150C	HSP78	P33416	811 aa		3.9	□□□□□ -1.78
CCM1	YGR150C	EBP2	P36049	427 aa	Known RBP	3.9	□□□□□ -1.78
CCM1	YGR150C	FKH1	P40466	484 aa		3.9	□□□□□ -1.78
CCM1	YGR150C	SYH1	Q02875	849 aa	Known RBP	3.9	□□□□□ -1.78
CCM1	YGR150C	SHE9	Q04172	456 aa		3.9	□□□□□ -1.78
CCM1	YGR150C	TSR2	Q06672	205 aa	Known RBP	3.9	□□□□□ -1.78
CCM1	YGR150C	PSR2	Q07949	397 aa		3.9	□□□□□ -1.78
CCM1	YGR150C	ALR1	Q08269	859 aa		3.9	□□□□□ -1.78
CCM1	YGR150C	AGP1	P25376	633 aa		3.9	□□□□□ -1.79
CCM1	YGR150C	PTP2	P29461	750 aa		3.9	□□□□□ -1.79
CCM1	YGR150C	UGA4	P32837	571 aa		3.9	□□□□□ -1.79
CCM1	YGR150C	SMC1	P32908	1225 aa		3.9	□□□□□ -1.79
CCM1	YGR150C	MNT3	P40549	630 aa		3.9	□□□□□ -1.79
CCM1	YGR150C	UBA2	P52488	636 aa		3.9	□□□□□ -1.79
CCM1	YGR150C	YCS4	Q06156	1176 aa		3.9	□□□□□ -1.79
CCM1	YGR150C	IMH1	Q06704	911 aa	Known RBP	3.9	□□□□□ -1.79
CCM1	YGR150C	REH1	Q06709	432 aa		3.9	□□□□□ -1.79
CCM1	YGR150C	BMT6	Q12291	365 aa		3.9	□□□□□ -1.79
CCM1	YGR150C	SWI5	P08153	709 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	HOM3	P10869	527 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	MCM5	P29496	775 aa	Known RBP	3.89	□□□□□ -1.79
CCM1	YGR150C	MRP8	P35719	219 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	PES4	P39684	611 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	PIC2	P40035	300 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	EMW1	P42842	904 aa	Known RBP	3.89	□□□□□ -1.79
CCM1	YGR150C	RSC1	P53236	928 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	SDA1	P53313	767 aa	Known RBP	3.89	□□□□□ -1.79
CCM1	YGR150C	YLR001C	Q07895	862 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	TMA46	Q12000	345 aa	Known RBP	3.89	□□□□□ -1.79
CCM1	YGR150C	SPS1	P08458	490 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	APA1	P16550	321 aa	Known RBP	3.89	□□□□□ -1.79
CCM1	YGR150C	NUD1	P32336	851 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	VBA5	P36172	582 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	BAP2	P38084	609 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	RRP8	P38961	392 aa	Known RBP	3.89	□□□□□ -1.79
CCM1	YGR150C	GDH3	P39708	457 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	BNA1	P47096	177 aa		3.89	□□□□□ -1.79
CCM1	YGR150C	UTP8	P53276	713 aa	Known RBP	3.89	□□□□□ -1.79
CCM1	YGR150C	BUL2	Q03758	920 aa	Known RBP	3.89	□□□□□ -1.79
CCM1	YGR150C	MRPL33	P20084	86 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	MEF1	P25039	761 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	TYS1	P36421	394 aa	Known RBP	3.88	□□□□□ -1.79
CCM1	YGR150C	SEA4	P38164	1038 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	RKM3	P38222	552 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	APE4	P38821	490 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	ESL1	P40456	1118 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	HXT8	P40886	569 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	ADI1	Q03677	179 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	GIC2	Q06648	383 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	IRC3	Q06683	689 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	DBF20	P32328	564 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	MCM10	P32354	571 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	NIC96	P34077	839 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	HXT5	P38695	592 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	RIM4	P38741	713 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	DOT6	P40059	670 aa	Known RBP	3.88	□□□□□ -1.79
CCM1	YGR150C	SPC19	Q03954	165 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	HFD1	Q04458	532 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	YLR352W	Q06479	807 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	SSP2	Q08646	371 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	PSH1	Q12161	406 aa		3.88	□□□□□ -1.79
CCM1	YGR150C	PUS1	Q12211	544 aa	Known RBP	3.88	□□□□□ -1.79
CCM1	YGR150C	TY1B-A	O13527	1196 aa	Known RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	KAR2	P16474	682 aa	Known RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
CCM1	YGR150C	URA1	P28272	314 aa	Predicted RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	MKK2	P32491	506 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	ABD1	P32783	436 aa	Predicted RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	SAP185	P40856	1058 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	SEC26	P41810	973 aa	Known RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	VTC2	P43585	828 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	RSC8	P43609	557 aa	Known RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	HOS2	P53096	452 aa	Predicted RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	KRE33	P53914	1056 aa	Known RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	ULP1	Q02724	621 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	CYB2	P00175	591 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	VAC17	P25591	423 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	SBA1	P28707	216 aa	Known RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	CHS3	P29465	1165 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	MRF1	P30775	413 aa	Predicted RBP	3.87	□□□□□ -1.79
CCM1	YGR150C	IMP2'	P32351	346 aa		3.87	□□□□□ -1.79
CCM1	YGR150C	EAP1	P36041	632 aa	Known RBP	3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms