RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W CTS1P29029 562 aa3.08□□□□□ -1.92
CUL3YGR003W TGL4P36165 910 aa3.08□□□□□ -1.92
CUL3YGR003W PYC2P32327 1180 aaKnown RBP3.07□□□□□ -1.92
CUL3YGR003W GTS1P40956 396 aa3.07□□□□□ -1.92
CUL3YGR003W RAD55P38953 406 aa3.07□□□□□ -1.92
CUL3YGR003W PUN1Q06991 263 aa3.07□□□□□ -1.92
CUL3YGR003W YIG1Q08956 461 aa3.07□□□□□ -1.92
CUL3YGR003W TIF6Q12522 245 aaKnown RBP3.07□□□□□ -1.92
CUL3YGR003W HGH1P48362 394 aaKnown RBP3.05□□□□□ -1.92
CUL3YGR003W SUT1P53032 299 aaKnown RBP3.05□□□□□ -1.92
CUL3YGR003W SNO2P53823 222 aa3.05□□□□□ -1.92
CUL3YGR003W PRE10P21242 288 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
CUL3YGR003W IRS4P36115 615 aaKnown RBP3.05□□□□□ -1.92
CUL3YGR003W PSY2P40164 858 aa3.05□□□□□ -1.92
CUL3YGR003W ALG6Q12001 544 aaKnown RBP3.05□□□□□ -1.92
CUL3YGR003W MEC3Q02574 474 aa3.04□□□□□ -1.92
CUL3YGR003W SMY2P32909 740 aaKnown RBP3.04□□□□□ -1.92
CUL3YGR003W FOL2P51601 243 aaKnown RBP3.04□□□□□ -1.92
CUL3YGR003W PUF6Q04373 656 aaKnown RBP3.04□□□□□ -1.92
CUL3YGR003W REI1P38344 393 aaPredicted RBP3.03□□□□□ -1.92
CUL3YGR003W MPT5P39016 859 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
CUL3YGR003W HTS1P07263 546 aaKnown RBP3.03□□□□□ -1.93
CUL3YGR003W PUS9Q12069 462 aa3.03□□□□□ -1.93
CUL3YGR003W SRS2P12954 1174 aa3.02□□□□□ -1.93
CUL3YGR003W KTR2P33550 425 aa3.02□□□□□ -1.93
CUL3YGR003W TAT2P38967 592 aa3.02□□□□□ -1.93
CUL3YGR003W SMC1P32908 1225 aa3.01□□□□□ -1.93
CUL3YGR003W NNK1P36003 928 aa3.01□□□□□ -1.93
CUL3YGR003W TRM2P33753 639 aa3.01□□□□□ -1.93
CUL3YGR003W ELA1P53861 379 aaPredicted RBP3.01□□□□□ -1.93
CUL3YGR003W APC11Q12157 165 aa3.01□□□□□ -1.93
CUL3YGR003W UTP22P53254 1237 aaPredicted RBP3□□□□□ -1.93
CUL3YGR003W MSE1P48525 536 aa3□□□□□ -1.93
CUL3YGR003W NPR1P22211 790 aa2.99□□□□□ -1.93
CUL3YGR003W YGR045CP53229 120 aa2.99□□□□□ -1.93
CUL3YGR003W RRN6P32786 894 aa2.99□□□□□ -1.93
CUL3YGR003W SLI1P53304 468 aa2.99□□□□□ -1.93
CUL3YGR003W AVO1Q08236 1176 aa2.99□□□□□ -1.93
CUL3YGR003W PUS7Q08647 676 aaKnown RBP2.99□□□□□ -1.93
CUL3YGR003W TTI1P36097 1038 aa2.98□□□□□ -1.93
CUL3YGR003W TPP1Q03796 238 aa2.98□□□□□ -1.93
CUL3YGR003W CTR9P89105 1077 aa2.97□□□□□ -1.93
CUL3YGR003W YOR352WQ08816 343 aa2.97□□□□□ -1.93
CUL3YGR003W CMR1Q12510 522 aaKnown RBP2.97□□□□□ -1.93
CUL3YGR003W RPB10P22139 70 aa2.97□□□□□ -1.93
CUL3YGR003W RIM11P38615 370 aa2.97□□□□□ -1.93
CUL3YGR003W SPT20P50875 604 aa2.97□□□□□ -1.93
CUL3YGR003W ECM2P38241 364 aaKnown RBP2.96□□□□□ -1.94
CUL3YGR003W YHL012WP38709 493 aa2.96□□□□□ -1.94
CUL3YGR003W YDR132CQ03900 495 aa2.96□□□□□ -1.94
CUL3YGR003W PRP5P21372 849 aaPredicted RBP2.95□□□□□ -1.94
CUL3YGR003W SAM35P14693 329 aa2.95□□□□□ -1.94
CUL3YGR003W MDL2P33311 773 aa2.95□□□□□ -1.94
CUL3YGR003W AIM26P32858 118 aa2.94□□□□□ -1.94
CUL3YGR003W CTF4Q01454 927 aa2.94□□□□□ -1.94
CUL3YGR003W CWC15Q03772 175 aaKnown RBP2.94□□□□□ -1.94
CUL3YGR003W COBP00163 385 aa2.93□□□□□ -1.94
CUL3YGR003W RAD53P22216 821 aa2.93□□□□□ -1.94
CUL3YGR003W ARL1P38116 183 aaKnown RBP2.93□□□□□ -1.94
CUL3YGR003W SUN4P53616 420 aa2.93□□□□□ -1.94
CUL3YGR003W PNP1Q05788 311 aa2.93□□□□□ -1.94
CUL3YGR003W GCN5Q03330 439 aa2.93□□□□□ -1.94
CUL3YGR003W SGD1Q06132 899 aa2.93□□□□□ -1.94
CUL3YGR003W HCM1P25364 564 aa2.92□□□□□ -1.94
CUL3YGR003W LAM1P38851 1228 aa2.92□□□□□ -1.94
CUL3YGR003W MEF2P39677 819 aa2.92□□□□□ -1.94
CUL3YGR003W URN1Q06525 465 aaKnown RBP2.92□□□□□ -1.94
CUL3YGR003W PUP1P25043 261 aa2.92□□□□□ -1.94
CUL3YGR003W ENV11P53246 860 aa2.92□□□□□ -1.94
CUL3YGR003W LSO1Q3E827 93 aa2.92□□□□□ -1.94
CUL3YGR003W DUR3P33413 735 aa2.91□□□□□ -1.94
CUL3YGR003W NMD3P38861 518 aaKnown RBP2.91□□□□□ -1.94
CUL3YGR003W CPS1P27614 576 aa2.91□□□□□ -1.94
CUL3YGR003W SNM1P40993 198 aa2.91□□□□□ -1.94
CUL3YGR003W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94 RIP-Chip
CUL3YGR003W AIM21P40563 679 aa2.9□□□□□ -1.95
CUL3YGR003W TY1A-LR4P0C2I8 440 aaKnown RBP2.89□□□□□ -1.95
CUL3YGR003W TY1A-DR6P0CX70 440 aa2.89□□□□□ -1.95
CUL3YGR003W TY1A-ER1P0CX71 440 aa2.89□□□□□ -1.95
CUL3YGR003W TY1A-LR2P0CX72 440 aa2.89□□□□□ -1.95
CUL3YGR003W TY1A-PLP0CX73 440 aa2.89□□□□□ -1.95
CUL3YGR003W TY1A-JR1P0CX74 440 aa2.89□□□□□ -1.95
CUL3YGR003W TY1A-LR3P0CX75 440 aa2.89□□□□□ -1.95
CUL3YGR003W TY1A-ML2P0CX76 440 aa2.89□□□□□ -1.95
CUL3YGR003W RET1P22276 1149 aaKnown RBP2.89□□□□□ -1.95
CUL3YGR003W PUF4P25339 888 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
CUL3YGR003W SRO9P25567 434 aaKnown RBP2.89□□□□□ -1.95
CUL3YGR003W YLR257WQ06146 321 aaKnown RBP2.89□□□□□ -1.95
CUL3YGR003W TY1A-GR1Q12085 440 aa2.89□□□□□ -1.95
CUL3YGR003W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.89□□□□□ -1.95
CUL3YGR003W TY1A-OLQ92392 440 aaKnown RBP2.89□□□□□ -1.95
CUL3YGR003W SPS1P08458 490 aa2.89□□□□□ -1.95
CUL3YGR003W PMI40P29952 429 aaKnown RBP2.89□□□□□ -1.95
CUL3YGR003W YML083CQ04526 418 aa2.88□□□□□ -1.95
CUL3YGR003W NTO1Q12311 748 aa2.88□□□□□ -1.95
CUL3YGR003W DOM34P33309 386 aa2.88□□□□□ -1.95
CUL3YGR003W YAR028WP39548 234 aa2.88□□□□□ -1.95
CUL3YGR003W HNT2P49775 206 aa2.88□□□□□ -1.95
CUL3YGR003W NOB1Q08444 459 aaKnown RBP2.88□□□□□ -1.95
CUL3YGR003W HRK1Q08732 759 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms