RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A SNM1P40993 198 aa3.49□□□□□ -1.85
SDH6YDR379C-A ALG6Q12001 544 aaKnown RBP3.49□□□□□ -1.85
SDH6YDR379C-A PYC2P32327 1180 aaKnown RBP3.48□□□□□ -1.85
SDH6YDR379C-A ALD4P46367 519 aaKnown RBP3.48□□□□□ -1.85
SDH6YDR379C-A FOL2P51601 243 aaKnown RBP3.48□□□□□ -1.85
SDH6YDR379C-A RPN1P38764 993 aaKnown RBP3.46□□□□□ -1.86
SDH6YDR379C-A NTA1P40354 457 aa3.46□□□□□ -1.86
SDH6YDR379C-A ECM23Q02710 187 aa3.46□□□□□ -1.86
SDH6YDR379C-A YIG1Q08956 461 aa3.46□□□□□ -1.86
SDH6YDR379C-A RAD53P22216 821 aa3.45□□□□□ -1.86
SDH6YDR379C-A SMY2P32909 740 aaKnown RBP3.45□□□□□ -1.86
SDH6YDR379C-A SIS2P36024 562 aa3.45□□□□□ -1.86
SDH6YDR379C-A TIF6Q12522 245 aaKnown RBP3.45□□□□□ -1.86
SDH6YDR379C-A REI1P38344 393 aaPredicted RBP3.44□□□□□ -1.86
SDH6YDR379C-A SPT20P50875 604 aa3.44□□□□□ -1.86
SDH6YDR379C-A SUN4P53616 420 aa3.44□□□□□ -1.86
SDH6YDR379C-A CTF4Q01454 927 aa3.44□□□□□ -1.86
SDH6YDR379C-A MEC3Q02574 474 aa3.44□□□□□ -1.86
SDH6YDR379C-A RAD55P38953 406 aa3.43□□□□□ -1.86
SDH6YDR379C-A ELA1P53861 379 aaPredicted RBP3.43□□□□□ -1.86
SDH6YDR379C-A IRS4P36115 615 aaKnown RBP3.42□□□□□ -1.86
SDH6YDR379C-A UBX7P38349 436 aa3.42□□□□□ -1.86
SDH6YDR379C-A PSY2P40164 858 aa3.42□□□□□ -1.86
SDH6YDR379C-A SUT1P53032 299 aaKnown RBP3.42□□□□□ -1.86
SDH6YDR379C-A HTS1P07263 546 aaKnown RBP3.41□□□□□ -1.86
SDH6YDR379C-A NNK1P36003 928 aa3.41□□□□□ -1.86
SDH6YDR379C-A YDR132CQ03900 495 aa3.41□□□□□ -1.86
SDH6YDR379C-A YOR352WQ08816 343 aa3.41□□□□□ -1.86
SDH6YDR379C-A TGL4P36165 910 aa3.4□□□□□ -1.87
SDH6YDR379C-A YGR045CP53229 120 aa3.4□□□□□ -1.87
SDH6YDR379C-A PUN1Q06991 263 aa3.4□□□□□ -1.87
SDH6YDR379C-A PUS7Q08647 676 aaKnown RBP3.4□□□□□ -1.87
SDH6YDR379C-A HCM1P25364 564 aa3.39□□□□□ -1.87
SDH6YDR379C-A KTR2P33550 425 aa3.39□□□□□ -1.87
SDH6YDR379C-A TPP1Q03796 238 aa3.39□□□□□ -1.87
SDH6YDR379C-A AVO1Q08236 1176 aa3.39□□□□□ -1.87
SDH6YDR379C-A AIM21P40563 679 aa3.38□□□□□ -1.87
SDH6YDR379C-A UTP22P53254 1237 aaPredicted RBP3.38□□□□□ -1.87
SDH6YDR379C-A GCN5Q03330 439 aa3.37□□□□□ -1.87
SDH6YDR379C-A NPR1P22211 790 aa3.36□□□□□ -1.87
SDH6YDR379C-A AIM26P32858 118 aa3.36□□□□□ -1.87
SDH6YDR379C-A YHL012WP38709 493 aa3.36□□□□□ -1.87
SDH6YDR379C-A MEF2P39677 819 aa3.36□□□□□ -1.87
SDH6YDR379C-A SAM35P14693 329 aa3.35□□□□□ -1.87
SDH6YDR379C-A SGD1Q06132 899 aa3.35□□□□□ -1.87
SDH6YDR379C-A BDF2Q07442 638 aa3.35□□□□□ -1.87
SDH6YDR379C-A SMC1P32908 1225 aa3.34□□□□□ -1.87
SDH6YDR379C-A MDL2P33311 773 aa3.34□□□□□ -1.87
SDH6YDR379C-A CHS7P38843 316 aa3.34□□□□□ -1.87
SDH6YDR379C-A LAM1P38851 1228 aa3.34□□□□□ -1.87
SDH6YDR379C-A URN1Q06525 465 aaKnown RBP3.34□□□□□ -1.87
SDH6YDR379C-A NTO1Q12311 748 aa3.34□□□□□ -1.87
SDH6YDR379C-A CMR1Q12510 522 aaKnown RBP3.34□□□□□ -1.87
SDH6YDR379C-A LEU3P08638 886 aa3.33□□□□□ -1.88
SDH6YDR379C-A SRS2P12954 1174 aa3.33□□□□□ -1.88
SDH6YDR379C-A PMI40P29952 429 aaKnown RBP3.33□□□□□ -1.88
SDH6YDR379C-A CTR9P89105 1077 aa3.33□□□□□ -1.88
SDH6YDR379C-A APC11Q12157 165 aa3.33□□□□□ -1.88
SDH6YDR379C-A RIM11P38615 370 aa3.32□□□□□ -1.88
SDH6YDR379C-A NMD3P38861 518 aaKnown RBP3.32□□□□□ -1.88
SDH6YDR379C-A MCM6P53091 1017 aaKnown RBP3.32□□□□□ -1.88
SDH6YDR379C-A PUF6Q04373 656 aaKnown RBP3.32□□□□□ -1.88
SDH6YDR379C-A RPB10P22139 70 aa3.31□□□□□ -1.88
SDH6YDR379C-A PUF4P25339 888 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
SDH6YDR379C-A UBP3Q01477 912 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88 RIP-Chip
SDH6YDR379C-A ECM2P38241 364 aaKnown RBP3.3□□□□□ -1.88
SDH6YDR379C-A MNN10P50108 393 aaKnown RBP3.3□□□□□ -1.88
SDH6YDR379C-A COBP00163 385 aa3.29□□□□□ -1.88
SDH6YDR379C-A PRP5P21372 849 aaPredicted RBP3.29□□□□□ -1.88
SDH6YDR379C-A RRN6P32786 894 aa3.29□□□□□ -1.88
SDH6YDR379C-A ENV11P53246 860 aa3.29□□□□□ -1.88
SDH6YDR379C-A ROT1Q03691 256 aa3.29□□□□□ -1.88
SDH6YDR379C-A TMA10Q06177 86 aa3.29□□□□□ -1.88
SDH6YDR379C-A PPM2Q08282 695 aa3.29□□□□□ -1.88
SDH6YDR379C-A DOM34P33309 386 aa3.28□□□□□ -1.88
SDH6YDR379C-A PHO23P50947 330 aa3.28□□□□□ -1.88
SDH6YDR379C-A SPS1P08458 490 aa3.27□□□□□ -1.89
SDH6YDR379C-A ARL1P38116 183 aaKnown RBP3.27□□□□□ -1.89
SDH6YDR379C-A ATF1P40353 525 aa3.27□□□□□ -1.89
SDH6YDR379C-A LGE1Q02796 332 aaKnown RBP3.27□□□□□ -1.89
SDH6YDR379C-A YLR257WQ06146 321 aaKnown RBP3.27□□□□□ -1.89
SDH6YDR379C-A CYC1P00044 109 aaPredicted RBP3.26□□□□□ -1.89
SDH6YDR379C-A RET1P22276 1149 aaKnown RBP3.26□□□□□ -1.89
SDH6YDR379C-A STE11P23561 717 aa3.26□□□□□ -1.89
SDH6YDR379C-A DUR3P33413 735 aa3.26□□□□□ -1.89
SDH6YDR379C-A LST4P34239 828 aa3.26□□□□□ -1.89
SDH6YDR379C-A DUS4Q06063 367 aa3.26□□□□□ -1.89
SDH6YDR379C-A TY1A-LR4P0C2I8 440 aaKnown RBP3.25□□□□□ -1.89
SDH6YDR379C-A TY1A-DR6P0CX70 440 aa3.25□□□□□ -1.89
SDH6YDR379C-A TY1A-ER1P0CX71 440 aa3.25□□□□□ -1.89
SDH6YDR379C-A TY1A-LR2P0CX72 440 aa3.25□□□□□ -1.89
SDH6YDR379C-A TY1A-PLP0CX73 440 aa3.25□□□□□ -1.89
SDH6YDR379C-A TY1A-JR1P0CX74 440 aa3.25□□□□□ -1.89
SDH6YDR379C-A TY1A-LR3P0CX75 440 aa3.25□□□□□ -1.89
SDH6YDR379C-A TY1A-ML2P0CX76 440 aa3.25□□□□□ -1.89
SDH6YDR379C-A SRO9P25567 434 aaKnown RBP3.25□□□□□ -1.89
SDH6YDR379C-A KIN4Q01919 800 aa3.25□□□□□ -1.89
SDH6YDR379C-A TY1A-GR1Q12085 440 aa3.25□□□□□ -1.89
SDH6YDR379C-A TY1A-PR3Q6Q5H1 440 aaKnown RBP3.25□□□□□ -1.89
SDH6YDR379C-A TY1A-OLQ92392 440 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms