RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C PYC2P32327 1180 aaKnown RBP1.85□□□□□ -2.11
SEC1YDR164C ALT1P52893 592 aa1.85□□□□□ -2.11
SEC1YDR164C ALG6Q12001 544 aaKnown RBP1.85□□□□□ -2.11
SEC1YDR164C YLR358CO13565 187 aa1.85□□□□□ -2.11
SEC1YDR164C RAD55P38953 406 aa1.85□□□□□ -2.11
SEC1YDR164C NTA1P40354 457 aa1.85□□□□□ -2.11
SEC1YDR164C GCV1P48015 400 aa1.85□□□□□ -2.11
SEC1YDR164C TIF6Q12522 245 aaKnown RBP1.85□□□□□ -2.11
SEC1YDR164C PSY2P40164 858 aa1.83□□□□□ -2.12
SEC1YDR164C FOL2P51601 243 aaKnown RBP1.83□□□□□ -2.12
SEC1YDR164C SNO2P53823 222 aa1.83□□□□□ -2.12
SEC1YDR164C IRS4P36115 615 aaKnown RBP1.82□□□□□ -2.12
SEC1YDR164C REI1P38344 393 aaPredicted RBP1.82□□□□□ -2.12
SEC1YDR164C MPT5P39016 859 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SEC1YDR164C ELA1P53861 379 aaPredicted RBP1.82□□□□□ -2.12
SEC1YDR164C YIG1Q08956 461 aa1.82□□□□□ -2.12
SEC1YDR164C PRE10P21242 288 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SEC1YDR164C KTR2P33550 425 aa1.82□□□□□ -2.12
SEC1YDR164C MEC3Q02574 474 aa1.82□□□□□ -2.12
SEC1YDR164C SMY2P32909 740 aaKnown RBP1.81□□□□□ -2.12
SEC1YDR164C PUS9Q12069 462 aa1.81□□□□□ -2.12
SEC1YDR164C HTS1P07263 546 aaKnown RBP1.81□□□□□ -2.12
SEC1YDR164C SRS2P12954 1174 aa1.81□□□□□ -2.12
SEC1YDR164C RPB10P22139 70 aa1.81□□□□□ -2.12
SEC1YDR164C TAT2P38967 592 aa1.81□□□□□ -2.12
SEC1YDR164C PUF6Q04373 656 aaKnown RBP1.81□□□□□ -2.12
SEC1YDR164C RRN6P32786 894 aa1.8□□□□□ -2.12
SEC1YDR164C SMC1P32908 1225 aa1.8□□□□□ -2.12
SEC1YDR164C TRM2P33753 639 aa1.8□□□□□ -2.12
SEC1YDR164C NNK1P36003 928 aa1.8□□□□□ -2.12
SEC1YDR164C SPT20P50875 604 aa1.8□□□□□ -2.12
SEC1YDR164C YGR045CP53229 120 aa1.8□□□□□ -2.12
SEC1YDR164C UTP22P53254 1237 aaPredicted RBP1.8□□□□□ -2.12
SEC1YDR164C TPP1Q03796 238 aa1.8□□□□□ -2.12
SEC1YDR164C AVO1Q08236 1176 aa1.8□□□□□ -2.12
SEC1YDR164C TTI1P36097 1038 aa1.79□□□□□ -2.12
SEC1YDR164C ECM2P38241 364 aaKnown RBP1.79□□□□□ -2.12
SEC1YDR164C MSE1P48525 536 aa1.79□□□□□ -2.12
SEC1YDR164C PUS7Q08647 676 aaKnown RBP1.79□□□□□ -2.12
SEC1YDR164C YOR352WQ08816 343 aa1.79□□□□□ -2.12
SEC1YDR164C NPR1P22211 790 aa1.79□□□□□ -2.12
SEC1YDR164C SLI1P53304 468 aa1.79□□□□□ -2.12
SEC1YDR164C APC11Q12157 165 aa1.79□□□□□ -2.12
SEC1YDR164C AIM26P32858 118 aa1.78□□□□□ -2.12
SEC1YDR164C YHL012WP38709 493 aa1.78□□□□□ -2.12
SEC1YDR164C NMD3P38861 518 aaKnown RBP1.78□□□□□ -2.12
SEC1YDR164C CTR9P89105 1077 aa1.78□□□□□ -2.12
SEC1YDR164C CMR1Q12510 522 aaKnown RBP1.78□□□□□ -2.12
SEC1YDR164C SUN4P53616 420 aa1.78□□□□□ -2.13
SEC1YDR164C URN1Q06525 465 aaKnown RBP1.78□□□□□ -2.13
SEC1YDR164C RIM11P38615 370 aa1.77□□□□□ -2.13
SEC1YDR164C COBP00163 385 aa1.76□□□□□ -2.13
SEC1YDR164C YDR132CQ03900 495 aa1.76□□□□□ -2.13
SEC1YDR164C CPS1P27614 576 aa1.76□□□□□ -2.13
SEC1YDR164C UBP3Q01477 912 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SEC1YDR164C PNP1Q05788 311 aa1.76□□□□□ -2.13
SEC1YDR164C SAM35P14693 329 aa1.75□□□□□ -2.13
SEC1YDR164C PUP1P25043 261 aa1.75□□□□□ -2.13
SEC1YDR164C HCM1P25364 564 aa1.75□□□□□ -2.13
SEC1YDR164C MDL2P33311 773 aa1.75□□□□□ -2.13
SEC1YDR164C DUR3P33413 735 aa1.75□□□□□ -2.13
SEC1YDR164C LAM1P38851 1228 aa1.75□□□□□ -2.13
SEC1YDR164C MEF2P39677 819 aa1.75□□□□□ -2.13
SEC1YDR164C GCN5Q03330 439 aa1.75□□□□□ -2.13
SEC1YDR164C SGD1Q06132 899 aa1.75□□□□□ -2.13
SEC1YDR164C PRP5P21372 849 aaPredicted RBP1.75□□□□□ -2.13
SEC1YDR164C RAD53P22216 821 aa1.75□□□□□ -2.13
SEC1YDR164C AIM21P40563 679 aa1.75□□□□□ -2.13
SEC1YDR164C CTF4Q01454 927 aa1.75□□□□□ -2.13
SEC1YDR164C CWC15Q03772 175 aaKnown RBP1.75□□□□□ -2.13
SEC1YDR164C TY1A-LR4P0C2I8 440 aaKnown RBP1.74□□□□□ -2.13
SEC1YDR164C TY1A-DR6P0CX70 440 aa1.74□□□□□ -2.13
SEC1YDR164C TY1A-ER1P0CX71 440 aa1.74□□□□□ -2.13
SEC1YDR164C TY1A-LR2P0CX72 440 aa1.74□□□□□ -2.13
SEC1YDR164C TY1A-PLP0CX73 440 aa1.74□□□□□ -2.13
SEC1YDR164C TY1A-JR1P0CX74 440 aa1.74□□□□□ -2.13
SEC1YDR164C TY1A-LR3P0CX75 440 aa1.74□□□□□ -2.13
SEC1YDR164C TY1A-ML2P0CX76 440 aa1.74□□□□□ -2.13
SEC1YDR164C ENV11P53246 860 aa1.74□□□□□ -2.13
SEC1YDR164C YLR257WQ06146 321 aaKnown RBP1.74□□□□□ -2.13
SEC1YDR164C TY1A-GR1Q12085 440 aa1.74□□□□□ -2.13
SEC1YDR164C TY1A-PR3Q6Q5H1 440 aaKnown RBP1.74□□□□□ -2.13
SEC1YDR164C TY1A-OLQ92392 440 aaKnown RBP1.74□□□□□ -2.13
SEC1YDR164C RET1P22276 1149 aaKnown RBP1.74□□□□□ -2.13
SEC1YDR164C ROT1Q03691 256 aa1.74□□□□□ -2.13
SEC1YDR164C LSO1Q3E827 93 aa1.74□□□□□ -2.13
SEC1YDR164C FUR4P05316 633 aaKnown RBP1.73□□□□□ -2.13
SEC1YDR164C SPS1P08458 490 aa1.73□□□□□ -2.13
SEC1YDR164C PUF4P25339 888 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
SEC1YDR164C ARL1P38116 183 aaKnown RBP1.73□□□□□ -2.13
SEC1YDR164C ATG14P38270 344 aa1.73□□□□□ -2.13
SEC1YDR164C SNM1P40993 198 aa1.73□□□□□ -2.13
SEC1YDR164C MCM6P53091 1017 aaKnown RBP1.73□□□□□ -2.13
SEC1YDR164C HSE1P38753 452 aa1.72□□□□□ -2.13
SEC1YDR164C YAR028WP39548 234 aa1.72□□□□□ -2.13
SEC1YDR164C SLS1P42900 643 aa1.72□□□□□ -2.13
SEC1YDR164C TMA10Q06177 86 aa1.72□□□□□ -2.13
SEC1YDR164C NTO1Q12311 748 aa1.72□□□□□ -2.13
SEC1YDR164C CYC1P00044 109 aaPredicted RBP1.72□□□□□ -2.13
SEC1YDR164C YKL077WP36081 392 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 169.7 ms