RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W MNL2Q12205 849 aa3.9□□□□□ -1.78
VPS41YDR080W PGM2P37012 569 aaKnown RBP3.9□□□□□ -1.79
VPS41YDR080W ISW1P38144 1129 aa3.9□□□□□ -1.79
VPS41YDR080W SLN1P39928 1220 aaPredicted RBP3.9□□□□□ -1.79
VPS41YDR080W CTR9P89105 1077 aa3.9□□□□□ -1.79
VPS41YDR080W GIS4Q04233 774 aa3.9□□□□□ -1.79
VPS41YDR080W TIF6Q12522 245 aaKnown RBP3.9□□□□□ -1.79
VPS41YDR080W COBP00163 385 aa3.89□□□□□ -1.79
VPS41YDR080W TFA2P36145 328 aa3.89□□□□□ -1.79
VPS41YDR080W SUT1P53032 299 aaKnown RBP3.89□□□□□ -1.79
VPS41YDR080W YDR215CQ12240 137 aa3.89□□□□□ -1.79
VPS41YDR080W MCX1P38323 520 aaPredicted RBP3.89□□□□□ -1.79
VPS41YDR080W GLT1Q12680 2145 aaKnown RBP3.89□□□□□ -1.79
VPS41YDR080W GEF1P37020 779 aa3.88□□□□□ -1.79
VPS41YDR080W NTA1P40354 457 aa3.88□□□□□ -1.79
VPS41YDR080W MDJ2P42834 146 aa3.88□□□□□ -1.79
VPS41YDR080W PHM7Q12252 991 aa3.88□□□□□ -1.79
VPS41YDR080W FUR4P05316 633 aaKnown RBP3.87□□□□□ -1.79
VPS41YDR080W TYS1P36421 394 aaKnown RBP3.87□□□□□ -1.79
VPS41YDR080W QDR1P40475 563 aa3.87□□□□□ -1.79
VPS41YDR080W GPI13Q07830 1017 aa3.87□□□□□ -1.79
VPS41YDR080W HVG1P0CE11 249 aa3.87□□□□□ -1.79
VPS41YDR080W DUR3P33413 735 aa3.87□□□□□ -1.79
VPS41YDR080W BOI2P39969 1040 aa3.87□□□□□ -1.79
VPS41YDR080W CCT8P47079 568 aaKnown RBP3.87□□□□□ -1.79
VPS41YDR080W KAR5Q04746 504 aa3.87□□□□□ -1.79
VPS41YDR080W FRT1Q99332 602 aa3.87□□□□□ -1.79
VPS41YDR080W RPP1AP05318 106 aaPredicted RBP3.87□□□□□ -1.79
VPS41YDR080W AMN1P38285 549 aaPredicted RBP3.87□□□□□ -1.79
VPS41YDR080W ATG1P53104 897 aa3.87□□□□□ -1.79
VPS41YDR080W ALD3P54114 506 aa3.87□□□□□ -1.79
VPS41YDR080W MCA1Q08601 432 aa3.87□□□□□ -1.79
VPS41YDR080W RRN6P32786 894 aa3.86□□□□□ -1.79
VPS41YDR080W ERP5P38819 212 aa3.86□□□□□ -1.79
VPS41YDR080W PPT1P53043 513 aa3.86□□□□□ -1.79
VPS41YDR080W YNR014WP53719 212 aa3.86□□□□□ -1.79
VPS41YDR080W RPL34AP87262 121 aaPredicted RBP3.86□□□□□ -1.79
VPS41YDR080W MTC5Q03897 1148 aa3.86□□□□□ -1.79
VPS41YDR080W INP51P40559 946 aaKnown RBP3.86□□□□□ -1.79
VPS41YDR080W GLO3P38682 493 aaKnown RBP3.85□□□□□ -1.79
VPS41YDR080W PRY1P47032 299 aa3.85□□□□□ -1.79
VPS41YDR080W GAS5Q08193 484 aa3.85□□□□□ -1.79
VPS41YDR080W BUD21Q08492 214 aaPredicted RBP3.85□□□□□ -1.79
VPS41YDR080W YPR053CQ6Q5F3 151 aa3.85□□□□□ -1.79
VPS41YDR080W PSY2P40164 858 aa3.85□□□□□ -1.79
VPS41YDR080W BIO5P53744 561 aaKnown RBP3.85□□□□□ -1.79
VPS41YDR080W ALG14P38242 237 aa3.84□□□□□ -1.79
VPS41YDR080W RAD55P38953 406 aa3.84□□□□□ -1.79
VPS41YDR080W BUD9P53226 547 aa3.84□□□□□ -1.79
VPS41YDR080W YMR187CQ03236 431 aa3.84□□□□□ -1.79
VPS41YDR080W PUS1Q12211 544 aaKnown RBP3.84□□□□□ -1.79
VPS41YDR080W NHA1Q99271 985 aa3.84□□□□□ -1.79
VPS41YDR080W LSB3P43603 459 aaKnown RBP3.84□□□□□ -1.8
VPS41YDR080W YJL181WP46987 611 aa3.84□□□□□ -1.8
VPS41YDR080W YNR029CP53729 429 aaKnown RBP3.84□□□□□ -1.8
VPS41YDR080W RSC4Q02206 625 aa3.84□□□□□ -1.8
VPS41YDR080W IMH1Q06704 911 aaKnown RBP3.84□□□□□ -1.8
VPS41YDR080W CDC3P32457 520 aaKnown RBP3.83□□□□□ -1.8
VPS41YDR080W AIM46P38885 310 aa3.83□□□□□ -1.8
VPS41YDR080W HAT1Q12341 374 aa3.83□□□□□ -1.8
VPS41YDR080W PYC2P32327 1180 aaKnown RBP3.83□□□□□ -1.8
VPS41YDR080W IRS4P36115 615 aaKnown RBP3.83□□□□□ -1.8
VPS41YDR080W ACF4P47129 309 aa3.83□□□□□ -1.8
VPS41YDR080W YBL113CQ7M4S9 792 aa3.83□□□□□ -1.8
VPS41YDR080W URB1P34241 1764 aaKnown RBP3.82□□□□□ -1.8
VPS41YDR080W TY4B-PA0A0B7P3V8 1104 aa3.82□□□□□ -1.8
VPS41YDR080W FUS1P11710 512 aa3.82□□□□□ -1.8
VPS41YDR080W TED1P40533 473 aa3.82□□□□□ -1.8
VPS41YDR080W YNR065CP53751 1116 aa3.82□□□□□ -1.8
VPS41YDR080W TRS120Q04183 1289 aa3.82□□□□□ -1.8
VPS41YDR080W TY4A-HQ6Q5P6 413 aa3.82□□□□□ -1.8
VPS41YDR080W MET1P36150 593 aa3.81□□□□□ -1.8
VPS41YDR080W NUT2Q06213 157 aa3.81□□□□□ -1.8
VPS41YDR080W SOG2Q08817 791 aa3.81□□□□□ -1.8
VPS41YDR080W KRE5P22023 1365 aa3.81□□□□□ -1.8
VPS41YDR080W FIR1P40020 876 aa3.81□□□□□ -1.8
VPS41YDR080W GLO4Q12320 285 aa3.81□□□□□ -1.8
VPS41YDR080W ENT1Q12518 454 aa3.81□□□□□ -1.8
VPS41YDR080W SMC1P32908 1225 aa3.81□□□□□ -1.8
VPS41YDR080W GIP2P40036 548 aa3.81□□□□□ -1.8
VPS41YDR080W SOK2P53438 785 aaPredicted RBP3.81□□□□□ -1.8
VPS41YDR080W FKS3Q04952 1785 aa3.8□□□□□ -1.8
VPS41YDR080W AI3P03877 415 aa3.8□□□□□ -1.8
VPS41YDR080W RRM3P38766 723 aa3.8□□□□□ -1.8
VPS41YDR080W YJR124CP47159 448 aa3.8□□□□□ -1.8
VPS41YDR080W SLP1Q12232 587 aa3.8□□□□□ -1.8
VPS41YDR080W PGM1P33401 570 aaKnown RBP3.8□□□□□ -1.8
VPS41YDR080W GRS1P38088 690 aaKnown RBP3.8□□□□□ -1.8
VPS41YDR080W SSF1P38789 453 aaPredicted RBP3.8□□□□□ -1.8
VPS41YDR080W TY1A-NL1Q12391 440 aaKnown RBP3.8□□□□□ -1.8
VPS41YDR080W POL5P39985 1022 aaKnown RBP3.79□□□□□ -1.8
VPS41YDR080W RIA1P53893 1110 aa3.79□□□□□ -1.8
VPS41YDR080W TOS4Q06266 489 aa3.79□□□□□ -1.8
VPS41YDR080W WHI5Q12416 295 aa3.79□□□□□ -1.8
VPS41YDR080W RIM11P38615 370 aa3.79□□□□□ -1.8
VPS41YDR080W UFD2P54860 961 aa3.79□□□□□ -1.8
VPS41YDR080W TY4B-HP0C2J7 1802 aa3.79□□□□□ -1.8
VPS41YDR080W TY4B-JP47024 1803 aa3.79□□□□□ -1.8
VPS41YDR080W PAN5P38787 379 aa3.78□□□□□ -1.8
VPS41YDR080W CMR1Q12510 522 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms