RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeast

Gene VMA9, Length 222 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA9	YCL005W-A	EXO5	P38289	585 aa		3.13	□□□□□ -1.91
VMA9	YCL005W-A	NEM1	P38757	446 aa		3.13	□□□□□ -1.91
VMA9	YCL005W-A	RRM3	P38766	723 aa		3.13	□□□□□ -1.91
VMA9	YCL005W-A	PEX28	P38848	579 aa		3.13	□□□□□ -1.91
VMA9	YCL005W-A	RVS167	P39743	482 aa	Known RBP	3.13	□□□□□ -1.91
VMA9	YCL005W-A	BOI2	P39969	1040 aa		3.13	□□□□□ -1.91
VMA9	YCL005W-A	POL5	P39985	1022 aa	Known RBP	3.13	□□□□□ -1.91
VMA9	YCL005W-A	XKS1	P42826	600 aa		3.13	□□□□□ -1.91
VMA9	YCL005W-A	SLS1	P42900	643 aa		3.13	□□□□□ -1.91
VMA9	YCL005W-A	NSG2	P53898	299 aa		3.13	□□□□□ -1.91
VMA9	YCL005W-A	ALG6	Q12001	544 aa	Known RBP	3.13	□□□□□ -1.91
VMA9	YCL005W-A	TY4A-H	Q6Q5P6	413 aa		3.13	□□□□□ -1.91
VMA9	YCL005W-A	NHA1	Q99271	985 aa		3.13	□□□□□ -1.91
VMA9	YCL005W-A	GCR1	P07261	785 aa		3.12	□□□□□ -1.91
VMA9	YCL005W-A	MSH3	P25336	1018 aa		3.12	□□□□□ -1.91
VMA9	YCL005W-A	SLN1	P39928	1220 aa	Predicted RBP	3.12	□□□□□ -1.91
VMA9	YCL005W-A	MRPS18	P42847	217 aa		3.12	□□□□□ -1.91
VMA9	YCL005W-A	PRY1	P47032	299 aa		3.12	□□□□□ -1.91
VMA9	YCL005W-A	YGL140C	P53120	1219 aa		3.12	□□□□□ -1.91
VMA9	YCL005W-A	GUP1	P53154	560 aa		3.12	□□□□□ -1.91
VMA9	YCL005W-A	ESF1	Q06344	628 aa	Known RBP	3.12	□□□□□ -1.91
VMA9	YCL005W-A	MAG2	Q06436	670 aa	Known RBP	3.12	□□□□□ -1.91
VMA9	YCL005W-A	KAR2	P16474	682 aa	Known RBP	3.11	□□□□□ -1.91
VMA9	YCL005W-A	YCK2	P23292	546 aa	Known RBP	3.11	□□□□□ -1.91
VMA9	YCL005W-A	DUT1	P33317	147 aa		3.11	□□□□□ -1.91
VMA9	YCL005W-A	SQT1	P35184	431 aa		3.11	□□□□□ -1.91
VMA9	YCL005W-A	GNP1	P48813	663 aa		3.11	□□□□□ -1.91
VMA9	YCL005W-A	ELG1	Q12050	791 aa		3.11	□□□□□ -1.91
VMA9	YCL005W-A	DED1	P06634	604 aa	Known RBP	3.1	□□□□□ -1.91
VMA9	YCL005W-A	SEC23	P15303	768 aa	Known RBP	3.1	□□□□□ -1.91
VMA9	YCL005W-A	PET112	P33893	541 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	MET10	P39692	1035 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	SPO74	P45819	413 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	KIP3	P53086	805 aa	Known RBP	3.1	□□□□□ -1.91
VMA9	YCL005W-A	BUD9	P53226	547 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	UTP22	P53254	1237 aa	Predicted RBP	3.1	□□□□□ -1.91
VMA9	YCL005W-A	ALD6	P54115	500 aa	Known RBP	3.1	□□□□□ -1.91
VMA9	YCL005W-A	ROD1	Q02805	837 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	NOG1	Q02892	647 aa	Known RBP	3.1	□□□□□ -1.91
VMA9	YCL005W-A	VPS16	Q03308	798 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	SPO71	Q03868	1245 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	YMR074C	Q04773	145 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	HDA2	Q06629	674 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	MRL1	Q06815	381 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	YIG1	Q08956	461 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	MCD1	Q12158	566 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	YDR215C	Q12240	137 aa		3.1	□□□□□ -1.91
VMA9	YCL005W-A	TY1A-NL1	Q12391	440 aa	Known RBP	3.1	□□□□□ -1.91
VMA9	YCL005W-A	RDH54	P38086	958 aa		3.09	□□□□□ -1.91
VMA9	YCL005W-A	MCX1	P38323	520 aa	Predicted RBP	3.09	□□□□□ -1.91
VMA9	YCL005W-A	HXT13	P39924	564 aa		3.09	□□□□□ -1.91
VMA9	YCL005W-A	FAA4	P47912	694 aa	Known RBP	3.09	□□□□□ -1.91
VMA9	YCL005W-A	HXT17	P53631	564 aa		3.09	□□□□□ -1.91
VMA9	YCL005W-A	YNR063W	P53749	607 aa		3.09	□□□□□ -1.91
VMA9	YCL005W-A	HXT15	P54854	567 aa		3.09	□□□□□ -1.91
VMA9	YCL005W-A	EEB1	Q02891	456 aa		3.09	□□□□□ -1.91
VMA9	YCL005W-A	UTP5	Q04177	643 aa	Known RBP	3.09	□□□□□ -1.91
VMA9	YCL005W-A	MCA1	Q08601	432 aa		3.09	□□□□□ -1.91
VMA9	YCL005W-A	SLP1	Q12232	587 aa		3.09	□□□□□ -1.91
VMA9	YCL005W-A	SAC7	P17121	654 aa		3.08	□□□□□ -1.92
VMA9	YCL005W-A	AFG2	P32794	780 aa		3.08	□□□□□ -1.92
VMA9	YCL005W-A	YKL077W	P36081	392 aa		3.08	□□□□□ -1.92
VMA9	YCL005W-A	REI1	P38344	393 aa	Predicted RBP	3.08	□□□□□ -1.92
VMA9	YCL005W-A	NMD3	P38861	518 aa	Known RBP	3.08	□□□□□ -1.92
VMA9	YCL005W-A	VAC8	P39968	578 aa		3.08	□□□□□ -1.92
VMA9	YCL005W-A	NOP7	P53261	605 aa	Known RBP	3.08	□□□□□ -1.92
VMA9	YCL005W-A	NCE103	P53615	221 aa		3.08	□□□□□ -1.92
VMA9	YCL005W-A	RAT1	Q02792	1006 aa	Known RBP	3.08	□□□□□ -1.92
VMA9	YCL005W-A	RMD1	Q03441	430 aa		3.08	□□□□□ -1.92
VMA9	YCL005W-A	ESC2	Q06340	456 aa		3.08	□□□□□ -1.92
VMA9	YCL005W-A	CDC34	P14682	295 aa		3.07	□□□□□ -1.92
VMA9	YCL005W-A	PRI2	P20457	528 aa		3.07	□□□□□ -1.92
VMA9	YCL005W-A	NAM7	P30771	971 aa	Known RBP	3.07	□□□□□ -1.92
VMA9	YCL005W-A	MAE1	P36013	669 aa	Known RBP	3.07	□□□□□ -1.92
VMA9	YCL005W-A	YKL069W	P36088	180 aa		3.07	□□□□□ -1.92
VMA9	YCL005W-A	MAD1	P40957	749 aa		3.07	□□□□□ -1.92
VMA9	YCL005W-A	LEM3	P42838	414 aa		3.07	□□□□□ -1.92
VMA9	YCL005W-A	YGR045C	P53229	120 aa		3.07	□□□□□ -1.92
VMA9	YCL005W-A	ELA1	P53861	379 aa	Predicted RBP	3.07	□□□□□ -1.92
VMA9	YCL005W-A	MEC3	Q02574	474 aa		3.07	□□□□□ -1.92
VMA9	YCL005W-A	PIN2	Q12057	282 aa		3.07	□□□□□ -1.92
VMA9	YCL005W-A	AI3	P03877	415 aa		3.06	□□□□□ -1.92
VMA9	YCL005W-A	MOT2	P34909	587 aa	Known RBP	3.06	□□□□□ -1.92
VMA9	YCL005W-A	RER2	P35196	286 aa		3.06	□□□□□ -1.92
VMA9	YCL005W-A	MNN4	P36044	1178 aa		3.06	□□□□□ -1.92
VMA9	YCL005W-A	GPT2	P36148	743 aa		3.06	□□□□□ -1.92
VMA9	YCL005W-A	SHU2	P38957	223 aa		3.06	□□□□□ -1.92
VMA9	YCL005W-A	AKR1	P39010	764 aa		3.06	□□□□□ -1.92
VMA9	YCL005W-A	GCV1	P48015	400 aa		3.06	□□□□□ -1.92
VMA9	YCL005W-A	DSE4	P53753	1117 aa		3.06	□□□□□ -1.92
VMA9	YCL005W-A	GDE1	Q02979	1223 aa		3.06	□□□□□ -1.92
VMA9	YCL005W-A	EAR1	Q03212	550 aa		3.06	□□□□□ -1.92
VMA9	YCL005W-A	YMR187C	Q03236	431 aa		3.06	□□□□□ -1.92
VMA9	YCL005W-A	DOT1	Q04089	582 aa	Known RBP	3.06	□□□□□ -1.92
VMA9	YCL005W-A	EST2	Q06163	884 aa		3.06	□□□□□ -1.92
VMA9	YCL005W-A	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
VMA9	YCL005W-A	EBP2	P36049	427 aa	Known RBP	3.05	□□□□□ -1.92
VMA9	YCL005W-A	MTR4	P47047	1073 aa	Known RBP	3.05	□□□□□ -1.92
VMA9	YCL005W-A	CWC24	P53769	259 aa		3.05	□□□□□ -1.92
VMA9	YCL005W-A	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms