RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	DAL4	Q04895	635 aa		6.36	□□□□□ -1.39
SMP1	YBR182C	UTP4	Q06679	776 aa	Known RBP	6.36	□□□□□ -1.39
SMP1	YBR182C	YLR125W	Q12138	136 aa		6.36	□□□□□ -1.39
SMP1	YBR182C	YDR215C	Q12240	137 aa		6.36	□□□□□ -1.39
SMP1	YBR182C	HXT5	P38695	592 aa		6.35	□□□□□ -1.39
SMP1	YBR182C	FAA3	P39002	694 aa		6.35	□□□□□ -1.39
SMP1	YBR182C	FAA4	P47912	694 aa	Known RBP	6.35	□□□□□ -1.39
SMP1	YBR182C	URN1	Q06525	465 aa	Known RBP	6.35	□□□□□ -1.39
SMP1	YBR182C	OPI10	Q08202	246 aa		6.35	□□□□□ -1.39
SMP1	YBR182C	KAP122	P32767	1081 aa		6.34	□□□□□ -1.39
SMP1	YBR182C	KTR2	P33550	425 aa		6.34	□□□□□ -1.39
SMP1	YBR182C	MSC7	P38694	644 aa		6.34	□□□□□ -1.39
SMP1	YBR182C	UBP12	P39538	1254 aa		6.34	□□□□□ -1.39
SMP1	YBR182C	YCS4	Q06156	1176 aa		6.34	□□□□□ -1.39
SMP1	YBR182C	TOS4	Q06266	489 aa		6.34	□□□□□ -1.39
SMP1	YBR182C	PPM2	Q08282	695 aa		6.34	□□□□□ -1.39
SMP1	YBR182C	NHA1	Q99271	985 aa		6.34	□□□□□ -1.39
SMP1	YBR182C	KAR2	P16474	682 aa	Known RBP	6.33	□□□□□ -1.4
SMP1	YBR182C	PRI2	P20457	528 aa		6.33	□□□□□ -1.4
SMP1	YBR182C	ALG14	P38242	237 aa		6.33	□□□□□ -1.4
SMP1	YBR182C	SLN1	P39928	1220 aa	Predicted RBP	6.33	□□□□□ -1.4
SMP1	YBR182C	SPF1	P39986	1215 aa	Known RBP	6.33	□□□□□ -1.4
SMP1	YBR182C	FIR1	P40020	876 aa		6.33	□□□□□ -1.4
SMP1	YBR182C	YGR053C	P53234	283 aa		6.33	□□□□□ -1.4
SMP1	YBR182C	YOL057W	Q08225	711 aa		6.33	□□□□□ -1.4
SMP1	YBR182C	INP54	Q08227	384 aa	Known RBP	6.33	□□□□□ -1.4
SMP1	YBR182C	THI4	P32318	326 aa		6.32	□□□□□ -1.4
SMP1	YBR182C	TIM23	P32897	222 aa		6.32	□□□□□ -1.4
SMP1	YBR182C	GRX7	P38068	203 aa		6.32	□□□□□ -1.4
SMP1	YBR182C	LDH1	P38139	375 aa		6.32	□□□□□ -1.4
SMP1	YBR182C	RAD55	P38953	406 aa		6.32	□□□□□ -1.4
SMP1	YBR182C	LSB6	P42951	607 aa		6.32	□□□□□ -1.4
SMP1	YBR182C	BUD21	Q08492	214 aa	Predicted RBP	6.32	□□□□□ -1.4
SMP1	YBR182C	VMA3	P25515	160 aa		6.31	□□□□□ -1.4
SMP1	YBR182C	YEN1	P40028	759 aa		6.31	□□□□□ -1.4
SMP1	YBR182C	TYW3	P53177	273 aa		6.31	□□□□□ -1.4
SMP1	YBR182C	CUS1	Q02554	436 aa	Predicted RBP	6.31	□□□□□ -1.4
SMP1	YBR182C	SRM1	P21827	482 aa		6.31	□□□□□ -1.4
SMP1	YBR182C	PRP40	P33203	583 aa	Known RBP	6.31	□□□□□ -1.4
SMP1	YBR182C	PGM2	P37012	569 aa	Known RBP	6.31	□□□□□ -1.4
SMP1	YBR182C	YBR287W	P38355	427 aa		6.31	□□□□□ -1.4
SMP1	YBR182C	APM2	P38700	605 aa		6.31	□□□□□ -1.4
SMP1	YBR182C	CRP1	P38845	465 aa	Known RBP	6.31	□□□□□ -1.4
SMP1	YBR182C	SPO75	Q07798	868 aa		6.31	□□□□□ -1.4
SMP1	YBR182C	FLC1	Q08967	793 aa		6.31	□□□□□ -1.4
SMP1	YBR182C	FAL1	Q12099	399 aa	Known RBP	6.31	□□□□□ -1.4
SMP1	YBR182C	DYS1	P38791	387 aa		6.3	□□□□□ -1.4
SMP1	YBR182C	NTA1	P40354	457 aa		6.3	□□□□□ -1.4
SMP1	YBR182C	KRI1	P42846	591 aa	Known RBP	6.3	□□□□□ -1.4
SMP1	YBR182C	PRY1	P47032	299 aa		6.3	□□□□□ -1.4
SMP1	YBR182C	SKP1	P52286	194 aa		6.3	□□□□□ -1.4
SMP1	YBR182C	MCA1	Q08601	432 aa		6.3	□□□□□ -1.4
SMP1	YBR182C	IRS4	P36115	615 aa	Known RBP	6.29	□□□□□ -1.4
SMP1	YBR182C	AMN1	P38285	549 aa	Predicted RBP	6.29	□□□□□ -1.4
SMP1	YBR182C	GGA2	P38817	585 aa	Known RBP	6.29	□□□□□ -1.4
SMP1	YBR182C	PMC1	P38929	1173 aa	Predicted RBP	6.29	□□□□□ -1.4
SMP1	YBR182C	RSP5	P39940	809 aa	Known RBP	6.29	□□□□□ -1.4
SMP1	YBR182C	YPL109C	Q02981	657 aa		6.29	□□□□□ -1.4
SMP1	YBR182C	RTT10	Q08924	1013 aa		6.29	□□□□□ -1.4
SMP1	YBR182C	TMA46	Q12000	345 aa	Known RBP	6.29	□□□□□ -1.4
SMP1	YBR182C	OSH2	Q12451	1283 aa		6.29	□□□□□ -1.4
SMP1	YBR182C	GLT1	Q12680	2145 aa	Known RBP	6.29	□□□□□ -1.4
SMP1	YBR182C	NOP14	Q99207	810 aa	Known RBP	6.29	□□□□□ -1.4
SMP1	YBR182C	GAL11	P19659	1081 aa		6.28	□□□□□ -1.4
SMP1	YBR182C	YHR020W	P38708	688 aa	Known RBP	6.28	□□□□□ -1.4
SMP1	YBR182C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
SMP1	YBR182C	YGR125W	P53273	1036 aa		6.28	□□□□□ -1.4
SMP1	YBR182C	DNM1	P54861	757 aa		6.28	□□□□□ -1.4
SMP1	YBR182C	ADI1	Q03677	179 aa		6.28	□□□□□ -1.4
SMP1	YBR182C	FLP1	P03870	423 aa		6.27	□□□□□ -1.41
SMP1	YBR182C	MRC1	P25588	1096 aa		6.27	□□□□□ -1.41
SMP1	YBR182C	DUT1	P33317	147 aa		6.27	□□□□□ -1.41
SMP1	YBR182C	PSY2	P40164	858 aa		6.27	□□□□□ -1.41
SMP1	YBR182C	PRK1	P40494	810 aa		6.27	□□□□□ -1.41
SMP1	YBR182C	TPO2	P53283	614 aa		6.27	□□□□□ -1.41
SMP1	YBR182C	BAS1	P22035	811 aa		6.26	□□□□□ -1.41
SMP1	YBR182C	RAD27	P26793	382 aa		6.26	□□□□□ -1.41
SMP1	YBR182C	MCM5	P29496	775 aa	Known RBP	6.26	□□□□□ -1.41
SMP1	YBR182C	YKL069W	P36088	180 aa		6.26	□□□□□ -1.41
SMP1	YBR182C	QDR2	P40474	542 aa		6.26	□□□□□ -1.41
SMP1	YBR182C	GCR1	P07261	785 aa		6.25	□□□□□ -1.41
SMP1	YBR182C	MSN1	P22148	382 aa		6.25	□□□□□ -1.41
SMP1	YBR182C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
SMP1	YBR182C	ECM2	P38241	364 aa	Known RBP	6.25	□□□□□ -1.41
SMP1	YBR182C	RGD2	P43556	714 aa		6.25	□□□□□ -1.41
SMP1	YBR182C	ULP1	Q02724	621 aa		6.25	□□□□□ -1.41
SMP1	YBR182C	YPL034W	Q03083	165 aa		6.25	□□□□□ -1.41
SMP1	YBR182C	TIF6	Q12522	245 aa	Known RBP	6.25	□□□□□ -1.41
SMP1	YBR182C	HSP60	P19882	572 aa	Known RBP	6.24	□□□□□ -1.41
SMP1	YBR182C	SFP1	P32432	683 aa		6.24	□□□□□ -1.41
SMP1	YBR182C	MAC1	P35192	417 aa		6.24	□□□□□ -1.41
SMP1	YBR182C	YBR184W	P38299	523 aa		6.24	□□□□□ -1.41
SMP1	YBR182C	PAF1	P38351	445 aa		6.23	□□□□□ -1.41
SMP1	YBR182C	YNR029C	P53729	429 aa	Known RBP	6.23	□□□□□ -1.41
SMP1	YBR182C	YNR040W	P53736	256 aa		6.23	□□□□□ -1.41
SMP1	YBR182C	ADR1	P07248	1323 aa		6.23	□□□□□ -1.41
SMP1	YBR182C	CIT1	P00890	479 aa		6.22	□□□□□ -1.41
SMP1	YBR182C	ERR1	P0CX10	437 aa		6.22	□□□□□ -1.41
SMP1	YBR182C	ERR2	P0CX11	437 aa		6.22	□□□□□ -1.41
SMP1	YBR182C	RPC31	P17890	251 aa		6.22	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms