RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C REF2P42073 533 aaPredicted RBP6.13□□□□□ -1.43
RFA1YAR007C ATG23Q06671 453 aa6.13□□□□□ -1.43
RFA1YAR007C MCM4P30665 933 aaKnown RBP6.13□□□□□ -1.43
RFA1YAR007C YKT6P36015 200 aaKnown RBP6.13□□□□□ -1.43
RFA1YAR007C MUD2P36084 527 aaKnown RBP6.13□□□□□ -1.43
RFA1YAR007C STM1P39015 273 aaKnown RBP6.13□□□□□ -1.43
RFA1YAR007C YNL011CP53980 444 aa6.13□□□□□ -1.43
RFA1YAR007C ATG9Q12142 997 aa6.13□□□□□ -1.43
RFA1YAR007C FKS3Q04952 1785 aa6.13□□□□□ -1.43
RFA1YAR007C KIC1P38692 1080 aa6.12□□□□□ -1.43
RFA1YAR007C BUD6P41697 788 aa6.12□□□□□ -1.43
RFA1YAR007C VPS70P47161 811 aa6.12□□□□□ -1.43
RFA1YAR007C MAL13P53338 473 aa6.12□□□□□ -1.43
RFA1YAR007C YNR029CP53729 429 aaKnown RBP6.12□□□□□ -1.43
RFA1YAR007C HOT1Q03213 719 aa6.12□□□□□ -1.43
RFA1YAR007C SDH5Q08230 162 aa6.12□□□□□ -1.43
RFA1YAR007C YOL098CQ12496 1037 aa6.12□□□□□ -1.43
RFA1YAR007C PHO13P19881 312 aa6.11□□□□□ -1.43
RFA1YAR007C SPT5P27692 1063 aaKnown RBP6.11□□□□□ -1.43
RFA1YAR007C RFT1P38206 574 aaPredicted RBP6.11□□□□□ -1.43
RFA1YAR007C SPT8P38915 602 aa6.11□□□□□ -1.43
RFA1YAR007C HUL4P40985 892 aa6.11□□□□□ -1.43
RFA1YAR007C YKE2P52553 114 aa6.11□□□□□ -1.43
RFA1YAR007C YDR338CQ05497 695 aa6.11□□□□□ -1.43
RFA1YAR007C YOR223WQ12015 292 aa6.11□□□□□ -1.43
RFA1YAR007C RUD3Q12234 484 aaKnown RBP6.11□□□□□ -1.43
RFA1YAR007C MATALPHA2P0CY08 210 aa6.11□□□□□ -1.43
RFA1YAR007C HMLALPHA2P0CY09 210 aa6.11□□□□□ -1.43
RFA1YAR007C RPP1BP10622 106 aaKnown RBP6.11□□□□□ -1.43
RFA1YAR007C DAL7P21826 554 aa6.11□□□□□ -1.43
RFA1YAR007C KCC4P25389 1037 aa6.11□□□□□ -1.43
RFA1YAR007C FBP26P32604 452 aa6.11□□□□□ -1.43
RFA1YAR007C SLA1P32790 1244 aa6.11□□□□□ -1.43
RFA1YAR007C VPS38Q05919 439 aa6.11□□□□□ -1.43
RFA1YAR007C RAS1P01119 309 aa6.1□□□□□ -1.43
RFA1YAR007C RAD3P06839 778 aa6.1□□□□□ -1.43
RFA1YAR007C YEL043WP32618 956 aa6.1□□□□□ -1.43
RFA1YAR007C UBP12P39538 1254 aa6.1□□□□□ -1.43
RFA1YAR007C RIO2P40160 425 aaKnown RBP6.1□□□□□ -1.43
RFA1YAR007C ALF1P53904 254 aa6.1□□□□□ -1.43
RFA1YAR007C YLR407WQ06070 228 aa6.1□□□□□ -1.43
RFA1YAR007C BNI1P41832 1953 aa6.09□□□□□ -1.43
RFA1YAR007C GAP1P19145 602 aaPredicted RBP6.09□□□□□ -1.43
RFA1YAR007C PXL1P36166 706 aa6.09□□□□□ -1.43
RFA1YAR007C SSF1P38789 453 aaPredicted RBP6.09□□□□□ -1.43
RFA1YAR007C CCC2P38995 1004 aa6.09□□□□□ -1.43
RFA1YAR007C MIC19P43594 170 aa6.09□□□□□ -1.43
RFA1YAR007C BOP3P53958 396 aa6.09□□□□□ -1.43
RFA1YAR007C DNM1P54861 757 aa6.09□□□□□ -1.43
RFA1YAR007C CTF4Q01454 927 aa6.09□□□□□ -1.43
RFA1YAR007C GYP1Q08484 637 aa6.09□□□□□ -1.43
RFA1YAR007C RAD1P06777 1100 aa6.09□□□□□ -1.44
RFA1YAR007C LPD1P09624 499 aaKnown RBP6.09□□□□□ -1.44
RFA1YAR007C PRP16P15938 1071 aaPredicted RBP6.09□□□□□ -1.44
RFA1YAR007C RGP1P16664 663 aa6.09□□□□□ -1.44
RFA1YAR007C CDC60P26637 1090 aaKnown RBP6.09□□□□□ -1.44
RFA1YAR007C HEL1P36113 551 aa6.09□□□□□ -1.44
RFA1YAR007C CST6P40535 587 aa6.09□□□□□ -1.44
RFA1YAR007C EPL1P43572 832 aa6.09□□□□□ -1.44
RFA1YAR007C YJR079WP47126 109 aa6.09□□□□□ -1.44
RFA1YAR007C YRR1Q12172 810 aa6.09□□□□□ -1.44
RFA1YAR007C OSH2Q12451 1283 aa6.09□□□□□ -1.44
RFA1YAR007C TOP1P04786 769 aa6.08□□□□□ -1.44
RFA1YAR007C PGI1P12709 554 aaKnown RBP6.08□□□□□ -1.44
RFA1YAR007C PRE10P21242 288 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
RFA1YAR007C SEC65P29478 273 aa6.08□□□□□ -1.44
RFA1YAR007C CBF5P33322 483 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
RFA1YAR007C HXT10P43581 546 aa6.08□□□□□ -1.44
RFA1YAR007C TAN1P53072 289 aaPredicted RBP6.08□□□□□ -1.44
RFA1YAR007C NNF2P53253 936 aa6.08□□□□□ -1.44
RFA1YAR007C HXK1P04806 485 aaKnown RBP6.07□□□□□ -1.44
RFA1YAR007C SEC14P24280 304 aaKnown RBP6.07□□□□□ -1.44
RFA1YAR007C RAD51P25454 400 aa6.07□□□□□ -1.44
RFA1YAR007C IMP2'P32351 346 aa6.07□□□□□ -1.44
RFA1YAR007C YJR142WP47173 342 aa6.07□□□□□ -1.44
RFA1YAR007C STE23Q06010 1027 aa6.07□□□□□ -1.44
RFA1YAR007C ESF1Q06344 628 aaKnown RBP6.07□□□□□ -1.44
RFA1YAR007C MDM38Q08179 573 aa6.07□□□□□ -1.44
RFA1YAR007C HSP82P02829 709 aaKnown RBP6.07□□□□□ -1.44
RFA1YAR007C PEP3P27801 918 aa6.07□□□□□ -1.44
RFA1YAR007C ZUO1P32527 433 aaKnown RBP6.07□□□□□ -1.44
RFA1YAR007C ADE17P38009 592 aaKnown RBP6.07□□□□□ -1.44
RFA1YAR007C SMF1P38925 575 aa6.07□□□□□ -1.44
RFA1YAR007C BUD16P39988 312 aa6.07□□□□□ -1.44
RFA1YAR007C ECM23Q02710 187 aa6.07□□□□□ -1.44
RFA1YAR007C HCR1Q05775 265 aaKnown RBP6.07□□□□□ -1.44
RFA1YAR007C VAC14Q06708 880 aa6.07□□□□□ -1.44
RFA1YAR007C ALE1Q08548 619 aa6.07□□□□□ -1.44
RFA1YAR007C AFT2Q08957 416 aa6.07□□□□□ -1.44
RFA1YAR007C UTP10P42945 1769 aaKnown RBP6.06□□□□□ -1.44
RFA1YAR007C SSK22P25390 1331 aaPredicted RBP6.06□□□□□ -1.44
RFA1YAR007C ARD1P07347 238 aaPredicted RBP6.06□□□□□ -1.44
RFA1YAR007C SEC23P15303 768 aaKnown RBP6.06□□□□□ -1.44
RFA1YAR007C RAD53P22216 821 aa6.06□□□□□ -1.44
RFA1YAR007C SHM1P37292 490 aaPredicted RBP6.06□□□□□ -1.44
RFA1YAR007C ORC6P38826 435 aa6.06□□□□□ -1.44
RFA1YAR007C PEX21P50091 288 aa6.06□□□□□ -1.44
RFA1YAR007C VPS30Q02948 557 aa6.06□□□□□ -1.44
RFA1YAR007C GFD1Q04839 188 aaKnown RBP6.06□□□□□ -1.44
RFA1YAR007C COX6P00427 148 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 422.7 ms