RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W NPR1P22211 790 aa2.86□□□□□ -1.95
SNC1YAL030W PEX28P38848 579 aa2.86□□□□□ -1.95
SNC1YAL030W CHZ1P40019 153 aaPredicted RBP2.86□□□□□ -1.95
SNC1YAL030W XKS1P42826 600 aa2.86□□□□□ -1.95
SNC1YAL030W HUL5P53119 910 aa2.86□□□□□ -1.95
SNC1YAL030W YGL140CP53120 1219 aa2.86□□□□□ -1.95
SNC1YAL030W UTP14Q04500 899 aaKnown RBP2.86□□□□□ -1.95
SNC1YAL030W POB3Q04636 552 aaKnown RBP2.86□□□□□ -1.95
SNC1YAL030W MRL1Q06815 381 aa2.86□□□□□ -1.95
SNC1YAL030W FAL1Q12099 399 aaKnown RBP2.86□□□□□ -1.95
SNC1YAL030W GLO4Q12320 285 aa2.86□□□□□ -1.95
SNC1YAL030W TCB1Q12466 1186 aa2.86□□□□□ -1.95
SNC1YAL030W CCP1P00431 361 aa2.85□□□□□ -1.95
SNC1YAL030W TRP2P00899 507 aaKnown RBP2.85□□□□□ -1.95
SNC1YAL030W VMA4P22203 233 aaKnown RBP2.85□□□□□ -1.95
SNC1YAL030W SBA1P28707 216 aaKnown RBP2.85□□□□□ -1.95
SNC1YAL030W LYP1P32487 611 aa2.85□□□□□ -1.95
SNC1YAL030W SCT1P32784 759 aa2.85□□□□□ -1.95
SNC1YAL030W MRP8P35719 219 aa2.85□□□□□ -1.95
SNC1YAL030W YKL069WP36088 180 aa2.85□□□□□ -1.95
SNC1YAL030W GLY1P37303 387 aaKnown RBP2.85□□□□□ -1.95
SNC1YAL030W MRPL16P38064 232 aa2.85□□□□□ -1.95
SNC1YAL030W RDH54P38086 958 aa2.85□□□□□ -1.95
SNC1YAL030W AMN1P38285 549 aaPredicted RBP2.85□□□□□ -1.95
SNC1YAL030W YHR020WP38708 688 aaKnown RBP2.85□□□□□ -1.95
SNC1YAL030W GGA2P38817 585 aaKnown RBP2.85□□□□□ -1.95
SNC1YAL030W HXT13P39924 564 aa2.85□□□□□ -1.95
SNC1YAL030W HXT17P53631 564 aa2.85□□□□□ -1.95
SNC1YAL030W YNR040WP53736 256 aa2.85□□□□□ -1.95
SNC1YAL030W CAF120P53836 1060 aa2.85□□□□□ -1.95
SNC1YAL030W HXT15P54854 567 aa2.85□□□□□ -1.95
SNC1YAL030W UBP2Q01476 1272 aa2.85□□□□□ -1.95
SNC1YAL030W SPO20Q04359 397 aa2.85□□□□□ -1.95
SNC1YAL030W HDA2Q06629 674 aa2.85□□□□□ -1.95
SNC1YAL030W YLR125WQ12138 136 aa2.85□□□□□ -1.95
SNC1YAL030W PHO8P11491 566 aa2.84□□□□□ -1.95
SNC1YAL030W GAL11P19659 1081 aa2.84□□□□□ -1.95
SNC1YAL030W PRI2P20457 528 aa2.84□□□□□ -1.95
SNC1YAL030W BAS1P22035 811 aa2.84□□□□□ -1.95
SNC1YAL030W MSH3P25336 1018 aa2.84□□□□□ -1.95
SNC1YAL030W ARL1P38116 183 aaKnown RBP2.84□□□□□ -1.95
SNC1YAL030W EXO5P38289 585 aa2.84□□□□□ -1.95
SNC1YAL030W SNF7P39929 240 aaKnown RBP2.84□□□□□ -1.95
SNC1YAL030W NUP82P40368 713 aa2.84□□□□□ -1.95
SNC1YAL030W IRR1P40541 1150 aa2.84□□□□□ -1.95
SNC1YAL030W FET4P40988 552 aa2.84□□□□□ -1.95
SNC1YAL030W TIM54P47045 478 aa2.84□□□□□ -1.95
SNC1YAL030W TYW3P53177 273 aa2.84□□□□□ -1.95
SNC1YAL030W SCW11P53189 542 aa2.84□□□□□ -1.95
SNC1YAL030W BIO5P53744 561 aaKnown RBP2.84□□□□□ -1.95
SNC1YAL030W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
SNC1YAL030W SOG2Q08817 791 aa2.84□□□□□ -1.95
SNC1YAL030W MET6P05694 767 aaKnown RBP2.83□□□□□ -1.96
SNC1YAL030W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
SNC1YAL030W HEM13P11353 328 aaKnown RBP2.83□□□□□ -1.96
SNC1YAL030W TIM23P32897 222 aa2.83□□□□□ -1.96
SNC1YAL030W RER2P35196 286 aa2.83□□□□□ -1.96
SNC1YAL030W TFA2P36145 328 aa2.83□□□□□ -1.96
SNC1YAL030W PBY1P38254 753 aa2.83□□□□□ -1.96
SNC1YAL030W MSC7P38694 644 aa2.83□□□□□ -1.96
SNC1YAL030W MNN1P39106 762 aa2.83□□□□□ -1.96
SNC1YAL030W INP51P40559 946 aaKnown RBP2.83□□□□□ -1.96
SNC1YAL030W LEM3P42838 414 aa2.83□□□□□ -1.96
SNC1YAL030W PFD1P46988 109 aa2.83□□□□□ -1.96
SNC1YAL030W RKM2Q03942 479 aa2.83□□□□□ -1.96
SNC1YAL030W SPO75Q07798 868 aa2.83□□□□□ -1.96
SNC1YAL030W YIG1Q08956 461 aa2.83□□□□□ -1.96
SNC1YAL030W FLC1Q08967 793 aa2.83□□□□□ -1.96
SNC1YAL030W OSH2Q12451 1283 aa2.83□□□□□ -1.96
SNC1YAL030W YDR461C-AQ2V2P7 80 aa2.83□□□□□ -1.96
SNC1YAL030W HTS1P07263 546 aaKnown RBP2.82□□□□□ -1.96
SNC1YAL030W PRP9P19736 530 aaKnown RBP2.82□□□□□ -1.96
SNC1YAL030W HSP60P19882 572 aaKnown RBP2.82□□□□□ -1.96
SNC1YAL030W DIT1P21623 536 aa2.82□□□□□ -1.96
SNC1YAL030W RPL8BP29453 256 aaKnown RBP2.82□□□□□ -1.96
SNC1YAL030W YKL077WP36081 392 aa2.82□□□□□ -1.96
SNC1YAL030W YBR184WP38299 523 aa2.82□□□□□ -1.96
SNC1YAL030W OSH7P38755 437 aa2.82□□□□□ -1.96
SNC1YAL030W RSP5P39940 809 aaKnown RBP2.82□□□□□ -1.96
SNC1YAL030W MTR4P47047 1073 aaKnown RBP2.82□□□□□ -1.96
SNC1YAL030W YJR124CP47159 448 aa2.82□□□□□ -1.96
SNC1YAL030W GCV1P48015 400 aa2.82□□□□□ -1.96
SNC1YAL030W GUP1P53154 560 aa2.82□□□□□ -1.96
SNC1YAL030W ERP6P53198 216 aa2.82□□□□□ -1.96
SNC1YAL030W UTP8P53276 713 aaKnown RBP2.82□□□□□ -1.96
SNC1YAL030W PEX13P80667 386 aa2.82□□□□□ -1.96
SNC1YAL030W FMP25Q08023 583 aa2.82□□□□□ -1.96
SNC1YAL030W RKM4Q12504 494 aa2.82□□□□□ -1.96
SNC1YAL030W YGR161W-CQ3E744 92 aa2.82□□□□□ -1.96
SNC1YAL030W CIT1P00890 479 aa2.81□□□□□ -1.96
SNC1YAL030W TY1A-LR4P0C2I8 440 aaKnown RBP2.81□□□□□ -1.96
SNC1YAL030W TY1A-DR6P0CX70 440 aa2.81□□□□□ -1.96
SNC1YAL030W TY1A-ER1P0CX71 440 aa2.81□□□□□ -1.96
SNC1YAL030W TY1A-LR2P0CX72 440 aa2.81□□□□□ -1.96
SNC1YAL030W TY1A-PLP0CX73 440 aa2.81□□□□□ -1.96
SNC1YAL030W TY1A-JR1P0CX74 440 aa2.81□□□□□ -1.96
SNC1YAL030W TY1A-LR3P0CX75 440 aa2.81□□□□□ -1.96
SNC1YAL030W TY1A-ML2P0CX76 440 aa2.81□□□□□ -1.96
SNC1YAL030W SBP1P10080 294 aaKnown RBP2.81□□□□□ -1.96
SNC1YAL030W DBP5P20449 482 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms