RNA–Protein interactions for RNA: ENSMUST00000206914.1

Rnf40-206, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-206ENSMUST00000206914 Zkscan1Q8BGS3 561 aaKnown RBP13.36□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Aldh8a1Q8BH00 487 aa13.36□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Fez1Q8K0X8 392 aa13.36□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Eif4g2Q62448 906 aaKnown RBP13.36□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Gcc1Q9D4H2 778 aa13.36□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Mroh1E0CZ22 1640 aa13.35□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Vamp4O70480 141 aa13.35□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Gnai1B2RSH2 354 aa13.35□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Cdc37l1Q9CZP7 335 aa13.35□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Gnai3Q9DC51 354 aa13.35□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Ush1cQ9ES64 910 aa13.35□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Gli2Q0VGT2 1544 aa13.35□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Q4VA45 678 aa13.35□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Trim27Q62158 513 aa13.35□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Cavin2Q63918 418 aaKnown RBP13.35□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Bloc1s4Q8VED2 215 aa13.35□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Nectin2P32507 530 aa13.34□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Aplp1Q03157 653 aa13.34□□□□□ -0.27
Rnf40-206ENSMUST00000206914 OvosQ3UU35 1456 aa13.34□□□□□ -0.27
Rnf40-206ENSMUST00000206914 NinlQ6ZQ12 1394 aa13.34□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Ppip5k2Q6ZQB6 1129 aa13.34□□□□□ -0.27
Rnf40-206ENSMUST00000206914 Gsto1O09131 240 aa13.33□□□□□ -0.28
Rnf40-206ENSMUST00000206914 PtmaP26350 111 aa13.33□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Slc12a5Q91V14 1138 aa13.33□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Arhgap23Q69ZH9 1483 aa13.33□□□□□ -0.28
Rnf40-206ENSMUST00000206914 EngaseQ8BX80 734 aa13.32□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Trim28Q62318 834 aa13.32□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Erich6bQ9D4S6 220 aa13.32□□□□□ -0.28
Rnf40-206ENSMUST00000206914 PalmQ9Z0P4 383 aa13.32□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Becn1O88597 448 aa13.31□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Gse1Q3U3C9 1213 aa13.31□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Taok2Q6ZQ29 1240 aa13.31□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Atp10aO54827 1508 aa13.31□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Sos1Q62245 1319 aa13.31□□□□□ -0.28
Rnf40-206ENSMUST00000206914 CltcQ68FD5 1675 aaKnown RBP13.31□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Elp1Q7TT37 1333 aaKnown RBP13.31□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Stk26Q99JT2 416 aa13.3□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Rasa1E9PYG6 1038 aa13.3□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Aldh1l2Q8K009 923 aa13.3□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Glipr1l2Q9CQ35 332 aa13.29□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Ccdc146E9Q9F7 977 aa13.29□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Nucb1Q02819 459 aaKnown RBP13.29□□□□□ -0.28
Rnf40-206ENSMUST00000206914 4931400O07RikQ9D4M5 137 aa13.29□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Dmrtc1Q9D9R7 182 aa13.28□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Vsig10D3YX43 558 aa13.28□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Ppp1r15aP17564 657 aa13.28□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Rab11fip3Q8CHD8 1047 aa13.28□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Ppp6r3Q922D4 844 aa13.28□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Ythdc2B2RR83 1445 aaKnown RBP13.28□□□□□ -0.28
Rnf40-206ENSMUST00000206914 Knl1Q66JQ7 1612 aa13.27□□□□□ -0.29
Rnf40-206ENSMUST00000206914 MarsQ68FL6 902 aaKnown RBP13.27□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Ptch1Q61115 1434 aa13.26□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Pdia4P08003 638 aaKnown RBP13.26□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Nom1Q3UFM5 854 aaKnown RBP13.26□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Zranb1Q7M760 708 aa13.26□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Arid3cA6PWV5 409 aa13.26□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Pdia3P27773 505 aaKnown RBP13.26□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Ric3Q8BPM6 367 aa13.26□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Atp1b4Q99ME6 356 aa13.25□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Cyp27a1Q9DBG1 533 aa13.25□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Mrps27Q8BK72 415 aaKnown RBP13.25□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Cdk19Q8BWD8 501 aa13.25□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Usp16Q99LG0 825 aa13.25□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Ripk4Q9ERK0 786 aa13.25□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Synj2Q9D2G5 1434 aa13.25□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Tm6sf1P58749 370 aa13.25□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Shq1Q7TMX5 569 aa13.25□□□□□ -0.29
Rnf40-206ENSMUST00000206914 NgefQ8CHT1 710 aa13.24□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Adamts7Q68SA9 1657 aa13.24□□□□□ -0.29
Rnf40-206ENSMUST00000206914 FanclQ9CR14 375 aa13.24□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Rbm10Q99KG3 930 aaKnown RBP13.23□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Atp2b2Q9R0K7 1198 aa13.23□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Prrc2bQ7TPM1 1486 aaKnown RBP13.23□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Rnf123Q5XPI3 1314 aa13.23□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Kdm4aQ8BW72 1064 aa13.23□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Arhgef28P97433 1693 aa13.22□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Fam13aQ8BGI4 693 aa13.22□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Erc2Q6PH08 957 aa13.22□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Plekhg1F6S200 1446 aa13.22□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Erbb4Q61527 1308 aa13.22□□□□□ -0.29
Rnf40-206ENSMUST00000206914 PtprmP28828 1452 aa13.22□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Mdc1Q5PSV9 1707 aa13.22□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Spef2Q8C9J3 1734 aa13.22□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Triml2E9PW10 424 aa13.22□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Gripap1Q8VD04 806 aa13.22□□□□□ -0.29
Rnf40-206ENSMUST00000206914 AglF8VPN4 1532 aa13.21□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Kif4P33174 1231 aa13.21□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Cep170bQ80U49 1574 aa13.21□□□□□ -0.29
Rnf40-206ENSMUST00000206914 Atp6v1dP57746 247 aa13.21□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Utp14aQ640M1 767 aaKnown RBP13.21□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Mknk2Q8CDB0 459 aa13.21□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Gm9992B2RWK3 458 aa13.2□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Unc93aQ710D3 458 aa13.2□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Rcan3Q9JKK0 239 aa13.2□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Cdk12Q14AX6 1484 aaKnown RBP13.2□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Zdhhc9P59268 364 aa13.2□□□□□ -0.3
Rnf40-206ENSMUST00000206914 U2surpQ6NV83 1029 aaKnown RBP13.2□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Cyp46a1Q9WVK8 500 aa13.2□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Kif24Q6NWW5 1356 aa13.19□□□□□ -0.3
Rnf40-206ENSMUST00000206914 Kif20bQ80WE4 1774 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms