RNA–Protein interactions for RNA: ENSMUST00000116375.1

Cstf1-201, Transcript of Cleavage stimulation factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cstf1, Length 3,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1-201ENSMUST00000116375 Nectin2P32507 530 aa13.32□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Nsd3Q6P2L6 1439 aa13.32□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Brd1E9PZ26 1189 aaKnown RBP13.32□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Nwd1A6H603 1563 aa13.32□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Ankrd44B2RXR6 993 aa13.32□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Cgnl1Q6AW69 1298 aa13.32□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Nutm1Q8BHP2 1126 aa13.32□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Rsph6aQ8CDR2 708 aa13.32□□□□□ -0.28
Cstf1-201ENSMUST00000116375 PtpruB1AUH1 1446 aa13.31□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Stk31Q99MW1 1018 aa13.31□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Usp16Q99LG0 825 aa13.31□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Pnmal2G3X9N3 661 aa13.3□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Cog6Q8R3I3 657 aa13.3□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Uhrf1bp1lA2RSJ4 1457 aa13.3□□□□□ -0.28
Cstf1-201ENSMUST00000116375 U2surpQ6NV83 1029 aaKnown RBP13.29□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Kif1aP33173 1695 aa13.29□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Cabp2Q9JLK4 216 aa13.29□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Asxl2Q8BZ32 1370 aa13.29□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Ercc6l2Q9JIM3 1537 aa13.29□□□□□ -0.28
Cstf1-201ENSMUST00000116375 LifrP42703 1092 aa13.29□□□□□ -0.28
Cstf1-201ENSMUST00000116375 4933402E13RikQ9D4D2 429 aa13.29□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Gemin5Q8BX17 1502 aaKnown RBP13.27□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Spef2Q8C9J3 1734 aa13.26□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Astn2Q80Z10 1352 aa13.26□□□□□ -0.29
Cstf1-201ENSMUST00000116375 RictorQ6QI06 1708 aa13.26□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Ric3Q8BPM6 367 aa13.26□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Eif4g2Q62448 906 aaKnown RBP13.26□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Sirt1Q923E4 737 aa13.26□□□□□ -0.29
Cstf1-201ENSMUST00000116375 CarsQ9ER72 831 aaKnown RBP13.25□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Wdr63B2RY71 923 aa13.25□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Terf2O35144 541 aa13.25□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Cps1Q8C196 1500 aa13.25□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Gm10093D3YYI8 482 aa13.25□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Hdac1O09106 482 aaKnown RBP13.25□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Ecm2Q5FW85 670 aa13.25□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Rab11fip3Q8CHD8 1047 aa13.24□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Znf335A2A5K6 1337 aa13.24□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Fgd1P52734 960 aa13.24□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Mcm2P97310 904 aa13.24□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Aldh1l2Q8K009 923 aa13.24□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Mcm10Q0VBD2 885 aa13.23□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Gcc1Q9D4H2 778 aa13.23□□□□□ -0.29
Cstf1-201ENSMUST00000116375 MarsQ68FL6 902 aaKnown RBP13.23□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Trim27Q62158 513 aa13.23□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Plin1Q8CGN5 517 aa13.23□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Eif4a2P10630 407 aa13.22□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Ncapd2Q8K2Z4 1392 aa13.22□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Catsper2A2ARP9 588 aa13.22□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Rsph3aQ3UFY4 516 aa13.22□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Aldh8a1Q8BH00 487 aa13.22□□□□□ -0.29
Cstf1-201ENSMUST00000116375 HnrnpmQ9D0E1 729 aaKnown RBP13.22□□□□□ -0.29
Cstf1-201ENSMUST00000116375 PzpQ61838 1495 aa13.22□□□□□ -0.29
Cstf1-201ENSMUST00000116375 MpripP97434 1024 aa13.21□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Kif2cQ922S8 721 aa13.21□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Antxr1Q9CZ52 562 aa13.21□□□□□ -0.29
Cstf1-201ENSMUST00000116375 Senp3Q9EP97 568 aaKnown RBP13.21□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Nek4Q9Z1J2 792 aa13.21□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Rtf1A2AQ19 715 aaKnown RBP13.2□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Q3UJC8 639 aa13.2□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Tbc1d9Q3UYK3 1264 aa13.2□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Dip2bQ3UH60 1574 aa13.19□□□□□ -0.3
Cstf1-201ENSMUST00000116375 1700019A02RikA0A087WPV9 146 aa13.19□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Anapc15-psA0A140T8L6 141 aa13.19□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Safb2Q80YR5 991 aaKnown RBP13.19□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Tnrc6bQ8BKI2 1810 aaKnown RBP13.18□□□□□ -0.3
Cstf1-201ENSMUST00000116375 TmpoQ61033 693 aaKnown RBP13.18□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Triml2E9PW10 424 aa13.18□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Ccdc146E9Q9F7 977 aa13.18□□□□□ -0.3
Cstf1-201ENSMUST00000116375 CemipQ8BI06 1361 aa13.18□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Plcb2A3KGF7 1181 aa13.18□□□□□ -0.3
Cstf1-201ENSMUST00000116375 1700010I14RikQ7TPG0 532 aa13.18□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Klhdc4Q921I2 584 aa13.18□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Slit3Q9WVB4 1523 aa13.18□□□□□ -0.3
Cstf1-201ENSMUST00000116375 GorabQ8BRM2 368 aa13.17□□□□□ -0.3
Cstf1-201ENSMUST00000116375 NgefQ8CHT1 710 aa13.17□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Pik3c2bE9QAN8 1632 aa13.17□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Mdc1Q5PSV9 1707 aa13.17□□□□□ -0.3
Cstf1-201ENSMUST00000116375 CenppQ9CZ92 286 aa13.17□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Chl1P70232 1209 aa13.16□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Kif24Q6NWW5 1356 aa13.16□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Tm6sf1P58749 370 aa13.16□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Ssh1Q76I79 1042 aa13.16□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Aplp1Q03157 653 aa13.16□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Kdm4cQ8VCD7 1054 aa13.16□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Rfx1P48377 963 aa13.15□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Mcm4P49717 862 aa13.15□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Chd4Q6PDQ2 1915 aaKnown RBP13.15□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Fam13aQ8BGI4 693 aa13.15□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Tfip11Q9ERA6 838 aaKnown RBP13.15□□□□□ -0.3
Cstf1-201ENSMUST00000116375 Cdk12Q14AX6 1484 aaKnown RBP13.14□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Spryd3E9Q9B3 442 aa13.14□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Isy1Q69ZQ2 285 aaKnown RBP13.14□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Kif20bQ80WE4 1774 aaKnown RBP13.14□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Dnttip2Q8R2M2 758 aaKnown RBP13.14□□□□□ -0.31
Cstf1-201ENSMUST00000116375 AU015836B2RUM3 263 aa13.13□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Sv2bQ8BG39 683 aa13.13□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Rad17Q6NXW6 688 aa13.13□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Taok2Q6ZQ29 1240 aa13.13□□□□□ -0.31
Cstf1-201ENSMUST00000116375 IghaA0A0A6YXW6 389 aa13.12□□□□□ -0.31
Cstf1-201ENSMUST00000116375 Casq1O09165 405 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms