RNA–Protein interactions for RNA: ENSMUST00000113690.7

Tpm1-209, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-209ENSMUST00000113690 1700019A02RikA0A087WPV9 146 aa18.29■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Casq1O09165 405 aa18.29■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Cetn4Q8K4K1 168 aa18.29■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Smarca5Q91ZW3 1051 aaKnown RBP18.29■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Usp16Q99LG0 825 aa18.29■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Triml2E9PW10 424 aa18.28■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Rasa1E9PYG6 1038 aa18.28■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Utp14aQ640M1 767 aaKnown RBP18.28■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Tmx3Q8BXZ1 456 aa18.28■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Prdm2A2A7B5 1709 aaKnown RBP18.28■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Wwc1Q5SXA9 1104 aa18.28■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Ciz1Q8VEH2 845 aa18.28■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Chmp4cQ9D7F7 232 aa18.28■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Cabp2Q9JLK4 216 aa18.28■□□□□ 0.52
Tpm1-209ENSMUST00000113690 PaskQ8CEE6 1383 aa18.27■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Cep170bQ80U49 1574 aa18.27■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Dhx16G3X8X0 1044 aaKnown RBP18.27■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Kdm4cQ8VCD7 1054 aa18.27■□□□□ 0.52
Tpm1-209ENSMUST00000113690 Ift172Q6VH22 1749 aa18.27■□□□□ 0.51
Tpm1-209ENSMUST00000113690 NgefQ8CHT1 710 aa18.27■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Rbm10Q99KG3 930 aaKnown RBP18.26■□□□□ 0.51
Tpm1-209ENSMUST00000113690 PtmaP26350 111 aa18.26■□□□□ 0.51
Tpm1-209ENSMUST00000113690 EngaseQ8BX80 734 aa18.26■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Uhrf1bp1B2KF50 1429 aa18.26■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Aifm3Q3TY86 605 aa18.25■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Ric3Q8BPM6 367 aa18.25■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Topbp1Q6ZQF0 1515 aa18.25■□□□□ 0.51
Tpm1-209ENSMUST00000113690 CalcaP70160 136 aa18.24■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Ppip5k2Q6ZQB6 1129 aa18.24■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Isy1Q69ZQ2 285 aaKnown RBP18.24■□□□□ 0.51
Tpm1-209ENSMUST00000113690 OvosQ3UU35 1456 aa18.24■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Pibf1E9Q6K3 756 aa18.24■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Eif4g2Q62448 906 aaKnown RBP18.23■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Ncapd2Q8K2Z4 1392 aa18.23■□□□□ 0.51
Tpm1-209ENSMUST00000113690 PtprtQ99M80 1454 aa18.22■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Gnai1B2RSH2 354 aa18.22■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Fchsd2Q3USJ8 740 aa18.22■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Gnai3Q9DC51 354 aa18.22■□□□□ 0.51
Tpm1-209ENSMUST00000113690 1700010I14RikQ7TPG0 532 aa18.21■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Erbb4Q61527 1308 aa18.21■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Cdc42bpgQ80UW5 1551 aa18.21■□□□□ 0.51
Tpm1-209ENSMUST00000113690 Ddrgk1Q80WW9 315 aa18.2■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Ppp6r3Q922D4 844 aa18.2■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Trim28Q62318 834 aa18.2■□□□□ 0.5
Tpm1-209ENSMUST00000113690 CenppQ9CZ92 286 aa18.2■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Prrc2bQ7TPM1 1486 aaKnown RBP18.2■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Pdia4P08003 638 aaKnown RBP18.2■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Gdpd2Q9ESM6 539 aa18.2■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Pdia3P27773 505 aaKnown RBP18.19■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Mroh1E0CZ22 1640 aa18.19■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Depdc5P61460 1591 aa18.19■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Gm9992B2RWK3 458 aa18.19■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Unc93aQ710D3 458 aa18.19■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Cc2d1aQ8K1A6 943 aa18.19■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Tecpr2Q3UH45 1423 aa18.19■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Atp7bQ64446 1462 aa18.18■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Uhrf1bp1lA2RSJ4 1457 aa18.18■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Rbm27Q5SFM8 1060 aaKnown RBP18.17■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Zkscan1Q8BGS3 561 aaKnown RBP18.17■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Fam13aQ8BGI4 693 aa18.16■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Nucb1Q02819 459 aaKnown RBP18.16■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Pank2Q3U4S0 443 aa18.16■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Zdhhc9P59268 364 aa18.16■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Rnf214Q8BFU3 668 aaKnown RBP18.16■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Q9D2X8 372 aa18.16■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Chmp4bQ9D8B3 224 aaKnown RBP18.16■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Clcn1Q64347 994 aa18.15■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Knl1Q66JQ7 1612 aa18.15■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Gadd45bP22339 160 aa18.15■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Cgnl1Q6AW69 1298 aa18.15■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Cyp27a1Q9DBG1 533 aa18.15■□□□□ 0.5
Tpm1-209ENSMUST00000113690 Aldh8a1Q8BH00 487 aa18.14■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Ripk4Q9ERK0 786 aa18.14■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Syce3B5KM66 88 aa18.14■□□□□ 0.49
Tpm1-209ENSMUST00000113690 HnrnpuQ8VEK3 800 aaKnown RBP18.14■□□□□ 0.49
Tpm1-209ENSMUST00000113690 4931400O07RikQ9D4M5 137 aa18.14■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Kif24Q6NWW5 1356 aa18.14■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Asxl2Q8BZ32 1370 aa18.14■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Ppp1r15aP17564 657 aa18.13■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Map3k19E9Q3S4 1311 aa18.13■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Arhgap23Q69ZH9 1483 aa18.13■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Anapc15-psA0A140T8L6 141 aa18.13■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Irf5P56477 497 aa18.13■□□□□ 0.49
Tpm1-209ENSMUST00000113690 IbspQ61711 324 aa18.13■□□□□ 0.49
Tpm1-209ENSMUST00000113690 MpripP97434 1024 aa18.13■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Akap12Q9WTQ5 1684 aa18.12■□□□□ 0.49
Tpm1-209ENSMUST00000113690 MarsQ68FL6 902 aaKnown RBP18.12■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Prkar2bP31324 416 aa18.12■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Rab11fip3Q8CHD8 1047 aa18.12■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Gcc1Q9D4H2 778 aa18.12■□□□□ 0.49
Tpm1-209ENSMUST00000113690 VgfQ0VGU4 617 aa18.11■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Prune1Q8BIW1 454 aa18.11■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Bcar3Q9QZK2 820 aa18.11■□□□□ 0.49
Tpm1-209ENSMUST00000113690 ImpactO55091 318 aa18.1■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Atg4a-psA0A0G2JFS9 396 aa18.09■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Tpm2P58774 284 aa18.09■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Cpa2Q504N0 417 aa18.09■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Atg4aQ8C9S8 396 aa18.09■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Rsph6aQ8CDR2 708 aa18.09■□□□□ 0.49
Tpm1-209ENSMUST00000113690 Mdc1Q5PSV9 1707 aa18.09■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms