RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Qtrt2B8ZXI1 415 aa16.19■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Card10P58660 1021 aa16.19■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Tmem132eQ6IEE6 982 aa16.19■□□□□ 0.18
Ddx55-202ENSMUST00000111438 PalmQ9Z0P4 383 aa16.19■□□□□ 0.18
Ddx55-202ENSMUST00000111438 ZgpatQ8VDM1 511 aa16.18■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Bcl2l12Q9D3J3 255 aa16.18■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Cdhr2E9Q7P9 1308 aa16.18■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Gm21698A0A087WQP8 267 aa16.18■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Gm21671G3UY31 267 aa16.18■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Golga2Q921M4 999 aa16.17■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Fchsd2Q3USJ8 740 aa16.17■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Ccne1Q61457 408 aa16.17■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Smim5Q8BT42 78 aa16.16■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Nol11Q8BJW5 723 aaKnown RBP16.16■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Amotl2Q8K371 772 aa16.15■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Kdm6aO70546 1401 aa16.15■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Uspl1Q3ULM6 1089 aa16.15■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Acsbg1Q99PU5 721 aa16.15■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Zfp777B9EKF4 885 aa16.14■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Eya1P97767 591 aa16.14■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Txnrd1Q9JMH6 613 aa16.14■□□□□ 0.17
Ddx55-202ENSMUST00000111438 HdgfP51859 237 aaKnown RBP16.13■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Slit1Q80TR4 1531 aa16.12■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Q4VA45 678 aa16.12■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Slx1bQ8BX32 270 aa16.12■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Tcerg1Q8CGF7 1100 aaKnown RBP16.12■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Trpm3Q5F4S9 1721 aa16.12■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Arfgef2A2A5R2 1792 aa16.12■□□□□ 0.17
Ddx55-202ENSMUST00000111438 MpripP97434 1024 aa16.12■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Arhgef1Q61210 920 aaKnown RBP16.12■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Slc5a4bQ91ZP4 660 aa16.12■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Lrrc59Q922Q8 307 aaKnown RBP16.11■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Ncbp3Q8BZR9 615 aaKnown RBP16.11■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Nhsl1Q8CAF4 1587 aa16.11■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Uhrf1bp1B2KF50 1429 aa16.11■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Nolc1E9Q5C9 702 aaKnown RBP16.1■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Apaf1O88879 1249 aa16.1■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Pard3Q99NH2 1333 aa16.1■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Znf710Q3U288 666 aa16.1■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Ahnak2E9PYB0 1738 aaKnown RBP16.1■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Col15a1O35206 1367 aa16.09■□□□□ 0.17
Ddx55-202ENSMUST00000111438 CrklP47941 303 aa16.09■□□□□ 0.17
Ddx55-202ENSMUST00000111438 OptnQ8K3K8 584 aa16.09■□□□□ 0.17
Ddx55-202ENSMUST00000111438 Rtl5Q5DTT4 599 aa16.08■□□□□ 0.16
Ddx55-202ENSMUST00000111438 TnikP83510 1323 aa16.08■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Mapk8ip3Q9ESN9 1337 aa16.08■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Mcm10Q0VBD2 885 aa16.08■□□□□ 0.16
Ddx55-202ENSMUST00000111438 CrbnQ8C7D2 445 aa16.08■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Simc1E9Q6E9 1354 aa16.07■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Tnks1bp1P58871 1720 aa16.07■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Kat6bQ8BRB7 1872 aa16.06■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Zfp444Q3TDV8 331 aaKnown RBP16.06■□□□□ 0.16
Ddx55-202ENSMUST00000111438 RgmbQ7TQ33 436 aa16.06■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Ofd1Q80Z25 1017 aa16.06■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Ciz1Q8VEH2 845 aa16.06■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Cavin4A2AMM0 362 aa16.05■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Ddx54Q8K4L0 874 aaKnown RBP16.05■□□□□ 0.16
Ddx55-202ENSMUST00000111438 TkfcQ8VC30 578 aa16.05■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Stk31Q99MW1 1018 aa16.05■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Ppp1r37Q8BKR5 712 aa16.04■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Akap11E9Q777 1895 aa16.04■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Myo5bP21271 1818 aa16.03■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Adgrb1Q3UHD1 1582 aa16.03■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Cntnap1O54991 1385 aa16.03■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Ralbp1Q62172 648 aa16.03■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Rab11fip3Q8CHD8 1047 aa16.02■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Speer4f1Q9D5Q6 258 aa16.02■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Shank2Q80Z38 1476 aa16.02■□□□□ 0.16
Ddx55-202ENSMUST00000111438 Lrp6O88572 1613 aa16.02■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Dusp27Q148W8 1138 aa16.02■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Fbxo41Q6NS60 873 aa16.02■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Cabp2Q9JLK4 216 aa16.02■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Fer1l6E0CZ42 1862 aa16.01■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Iqcf3Q9D498 203 aa16.01■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Nup153E9Q3G8 1462 aaKnown RBP16.01■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Gsdma3Q5Y4Y6 464 aa16.01■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Rad21Q61550 635 aaKnown RBP16■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Plin1Q8CGN5 517 aa16■□□□□ 0.15
Ddx55-202ENSMUST00000111438 HypkQ9CR41 129 aa16■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Plekhd1B2RPU2 505 aa16■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Nyap1Q6PFX7 833 aa16■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Sema6bO54951 886 aa15.99■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Cacna1sQ02789 1880 aa15.99■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Swt1Q9DBQ9 907 aa15.99■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Gm10471E9Q1C7 252 aa15.98■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Ecm2Q5FW85 670 aa15.98■□□□□ 0.15
Ddx55-202ENSMUST00000111438 TmpoQ61033 693 aaKnown RBP15.98■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Tnrc6cQ3UHC0 1690 aaKnown RBP15.98■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Amotl1Q9D4H4 968 aa15.97■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Mast2Q60592 1734 aa15.97■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Ggt6Q6PDE7 497 aa15.97■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Zeb2Q9R0G7 1215 aa15.97■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Zranb3Q6NZP1 1069 aa15.96■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Ccdc30Q8BVF4 654 aa15.96■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Supt16hQ920B9 1047 aa15.96■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Atxn3Q9CVD2 355 aa15.96■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Tns2Q8CGB6 1400 aa15.96■□□□□ 0.15
Ddx55-202ENSMUST00000111438 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.96■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Neurod2Q62414 383 aa15.96■□□□□ 0.14
Ddx55-202ENSMUST00000111438 Emilin2Q8K482 1074 aa15.96■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms