RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Q4VA45 678 aa14.37□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Ciz1Q8VEH2 845 aa14.37□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Triml2E9PW10 424 aa14.36□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Kif20aP97329 887 aa14.36□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Knl1Q66JQ7 1612 aa14.36□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Cc2d1aQ8K1A6 943 aa14.35□□□□□ -0.11
Col9a1-202ENSMUST00000088349 RereQ80TZ9 1558 aa14.35□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Map3k19E9Q3S4 1311 aa14.35□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Ankrd44B2RXR6 993 aa14.35□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Rrp9Q91WM3 475 aaKnown RBP14.35□□□□□ -0.11
Col9a1-202ENSMUST00000088349 MaddQ80U28 1577 aa14.35□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Pik3r4Q8VD65 1358 aa14.34□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Ttc37F8VPK0 1563 aa14.34□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Pcdh10E9PXQ7 1057 aa14.34□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Ric3Q8BPM6 367 aa14.34□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Cetn4Q8K4K1 168 aa14.34□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Plxnc1Q9QZC2 1574 aa14.34□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Trim27Q62158 513 aa14.33□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Adgrl1Q80TR1 1466 aa14.33□□□□□ -0.11
Col9a1-202ENSMUST00000088349 Topbp1Q6ZQF0 1515 aa14.33□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Kiaa0556Q8C753 1610 aa14.33□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Smarca5Q91ZW3 1051 aaKnown RBP14.33□□□□□ -0.12
Col9a1-202ENSMUST00000088349 PaskQ8CEE6 1383 aa14.33□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Snap23O09044 210 aa14.33□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Ncbp3Q8BZR9 615 aaKnown RBP14.33□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Bloc1s4Q8VED2 215 aa14.33□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Chmp4cQ9D7F7 232 aa14.33□□□□□ -0.12
Col9a1-202ENSMUST00000088349 AglF8VPN4 1532 aa14.32□□□□□ -0.12
Col9a1-202ENSMUST00000088349 IghaA0A0A6YXW6 389 aa14.32□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Gnai1B2RSH2 354 aa14.32□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Casq1O09165 405 aa14.32□□□□□ -0.12
Col9a1-202ENSMUST00000088349 LifrP42703 1092 aa14.32□□□□□ -0.12
Col9a1-202ENSMUST00000088349 FanclQ9CR14 375 aa14.32□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Erich6bQ9D4S6 220 aa14.32□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Gnai3Q9DC51 354 aa14.32□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Aifm3Q3TY86 605 aa14.31□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Ggnbp2Q5SV77 696 aa14.31□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Wwc1Q5SXA9 1104 aa14.31□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Eif4g2Q62448 906 aaKnown RBP14.31□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Synj2Q9D2G5 1434 aa14.31□□□□□ -0.12
Col9a1-202ENSMUST00000088349 PtmaP26350 111 aa14.3□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Fchsd2Q3USJ8 740 aa14.3□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Eif2ak4Q9QZ05 1648 aa14.3□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Nrxn1Q9CS84 1514 aa14.3□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Tnnt1O88346 262 aa14.3□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Akap12Q9WTQ5 1684 aa14.29□□□□□ -0.12
Col9a1-202ENSMUST00000088349 MlecQ6ZQI3 291 aaKnown RBP14.29□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Naip7Q9JIB3 1402 aa14.29□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Sipa1l1Q8C0T5 1782 aa14.29□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Mroh1E0CZ22 1640 aa14.29□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Bag4Q8CI61 457 aa14.29□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Rrp12Q6P5B0 1295 aaKnown RBP14.28□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Chmp4bQ9D8B3 224 aaKnown RBP14.28□□□□□ -0.12
Col9a1-202ENSMUST00000088349 NpatQ8BMA5 1420 aa14.28□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Med14A2ABV5 1459 aaKnown RBP14.28□□□□□ -0.12
Col9a1-202ENSMUST00000088349 PtprmP28828 1452 aa14.28□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Uhrf1bp1lA2RSJ4 1457 aa14.28□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Hecw2Q6I6G8 1578 aa14.28□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Rasa1E9PYG6 1038 aa14.28□□□□□ -0.12
Col9a1-202ENSMUST00000088349 CalcaP70160 136 aa14.28□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Ppip5k2Q6ZQB6 1129 aa14.28□□□□□ -0.12
Col9a1-202ENSMUST00000088349 AdgbG3UZ78 1657 aa14.28□□□□□ -0.12
Col9a1-202ENSMUST00000088349 Cdc42bpgQ80UW5 1551 aa14.27□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.27□□□□□ -0.13
Col9a1-202ENSMUST00000088349 HnrnpuQ8VEK3 800 aaKnown RBP14.27□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Trpm1Q2TV84 1622 aa14.27□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Uhrf1bp1B2KF50 1429 aa14.26□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Trim28Q62318 834 aa14.26□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Ercc6l2Q9JIM3 1537 aa14.26□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Kdm4cQ8VCD7 1054 aa14.26□□□□□ -0.13
Col9a1-202ENSMUST00000088349 1700010I14RikQ7TPG0 532 aa14.26□□□□□ -0.13
Col9a1-202ENSMUST00000088349 PogkQ80TC5 607 aa14.26□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Ino80Q6ZPV2 1559 aa14.25□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Cabp4Q8VHC5 271 aa14.25□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Ahdc1Q6PAL7 1594 aaKnown RBP14.25□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Cul9Q80TT8 1865 aa14.25□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Ppp1r15aP17564 657 aa14.25□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Cgnl1Q6AW69 1298 aa14.25□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Tmx3Q8BXZ1 456 aa14.25□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Q9D2X8 372 aa14.25□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Prim1P20664 417 aa14.24□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Stk31Q99MW1 1018 aa14.24□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Rsph6aQ8CDR2 708 aa14.23□□□□□ -0.13
Col9a1-202ENSMUST00000088349 CenppQ9CZ92 286 aa14.23□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Tecpr2Q3UH45 1423 aa14.23□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Pdia3P27773 505 aaKnown RBP14.23□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Fam13aQ8BGI4 693 aa14.23□□□□□ -0.13
Col9a1-202ENSMUST00000088349 EngaseQ8BX80 734 aa14.23□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Qser1A2BIE1 1698 aa14.23□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Eif4a2P10630 407 aa14.23□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Isy1Q69ZQ2 285 aaKnown RBP14.23□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Ppp6r3Q922D4 844 aa14.23□□□□□ -0.13
Col9a1-202ENSMUST00000088349 DmtnQ9WV69 405 aa14.23□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Arhgap23Q69ZH9 1483 aa14.22□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Nckap5lQ6GQX2 1323 aa14.22□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Rab11fip3Q8CHD8 1047 aa14.22□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Zkscan1Q8BGS3 561 aaKnown RBP14.21□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Rbm10Q99KG3 930 aaKnown RBP14.21□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Gdpd2Q9ESM6 539 aa14.21□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Gm21190A0A0G2JGJ6 266 aa14.21□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms