RNA–Protein interactions for RNA: ENSMUST00000052747.3

Nhlrc1-201, Transcript of E3 ubiquitin-protein ligase NHLRC1, mousemouse

APPRIS P1 BASIC

Gene Nhlrc1, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1-201ENSMUST00000052747 Rsph6aQ8CDR2 708 aa29.4■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 Cabp2Q9JLK4 216 aa29.39■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 Kif1aP33173 1695 aa29.38■■■□□ 2.29
Nhlrc1-201ENSMUST00000052747 KnstrnQ9D9Z1 312 aaKnown RBP29.38■■■□□ 2.29
Nhlrc1-201ENSMUST00000052747 Ankrd44B2RXR6 993 aa29.36■■■□□ 2.29
Nhlrc1-201ENSMUST00000052747 Aplp1Q03157 653 aa29.36■■■□□ 2.29
Nhlrc1-201ENSMUST00000052747 Txndc2Q6P902 515 aa29.36■■■□□ 2.29
Nhlrc1-201ENSMUST00000052747 RictorQ6QI06 1708 aa29.35■■■□□ 2.29
Nhlrc1-201ENSMUST00000052747 Spef2Q8C9J3 1734 aa29.35■■■□□ 2.29
Nhlrc1-201ENSMUST00000052747 Usp16Q99LG0 825 aa29.35■■■□□ 2.29
Nhlrc1-201ENSMUST00000052747 PtpruB1AUH1 1446 aa29.34■■■□□ 2.29
Nhlrc1-201ENSMUST00000052747 Wwc1Q5SXA9 1104 aa29.33■■■□□ 2.29
Nhlrc1-201ENSMUST00000052747 U2surpQ6NV83 1029 aaKnown RBP29.32■■■□□ 2.28
Nhlrc1-201ENSMUST00000052747 Catsper2A2ARP9 588 aa29.32■■■□□ 2.28
Nhlrc1-201ENSMUST00000052747 Plin1Q8CGN5 517 aa29.32■■■□□ 2.28
Nhlrc1-201ENSMUST00000052747 Antxr1Q9CZ52 562 aa29.31■■■□□ 2.28
Nhlrc1-201ENSMUST00000052747 Chmp4bQ9D8B3 224 aaKnown RBP29.31■■■□□ 2.28
Nhlrc1-201ENSMUST00000052747 Gemin5Q8BX17 1502 aaKnown RBP29.29■■■□□ 2.28
Nhlrc1-201ENSMUST00000052747 Terf2O35144 541 aa29.29■■■□□ 2.28
Nhlrc1-201ENSMUST00000052747 Cetn4Q8K4K1 168 aa29.28■■■□□ 2.28
Nhlrc1-201ENSMUST00000052747 Klhdc4Q921I2 584 aa29.28■■■□□ 2.28
Nhlrc1-201ENSMUST00000052747 CatipB9EKE5 520 aa29.27■■■□□ 2.28
Nhlrc1-201ENSMUST00000052747 Hoxb7P09024 217 aa29.27■■■□□ 2.28
Nhlrc1-201ENSMUST00000052747 LifrP42703 1092 aa29.27■■■□□ 2.28
Nhlrc1-201ENSMUST00000052747 IghaA0A0A6YXW6 389 aa29.26■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 Sos1Q62245 1319 aa29.26■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 Wdr63B2RY71 923 aa29.25■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 Cavin2Q63918 418 aaKnown RBP29.24■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 Cps1Q8C196 1500 aa29.24■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 Trim27Q62158 513 aa29.23■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 CarsQ9ER72 831 aaKnown RBP29.23■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 Eif4a2P10630 407 aa29.22■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 MarsQ68FL6 902 aaKnown RBP29.22■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 Pik3c2bE9QAN8 1632 aa29.22■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 Ric3Q8BPM6 367 aa29.22■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 MpripP97434 1024 aa29.21■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 Stk31Q99MW1 1018 aa29.21■■■□□ 2.27
Nhlrc1-201ENSMUST00000052747 Gm10093D3YYI8 482 aa29.19■■■□□ 2.26
Nhlrc1-201ENSMUST00000052747 Spryd3E9Q9B3 442 aa29.19■■■□□ 2.26
Nhlrc1-201ENSMUST00000052747 Hdac1O09106 482 aaKnown RBP29.19■■■□□ 2.26
Nhlrc1-201ENSMUST00000052747 HnrnpmQ9D0E1 729 aaKnown RBP29.18■■■□□ 2.26
Nhlrc1-201ENSMUST00000052747 Dip2bQ3UH60 1574 aa29.18■■■□□ 2.26
Nhlrc1-201ENSMUST00000052747 Tbc1d9Q3UYK3 1264 aa29.18■■■□□ 2.26
Nhlrc1-201ENSMUST00000052747 Chd4Q6PDQ2 1915 aaKnown RBP29.17■■■□□ 2.26
Nhlrc1-201ENSMUST00000052747 Kif24Q6NWW5 1356 aa29.15■■■□□ 2.26
Nhlrc1-201ENSMUST00000052747 Nek4Q9Z1J2 792 aa29.15■■■□□ 2.26
Nhlrc1-201ENSMUST00000052747 Plcd4Q8K3R3 807 aa29.14■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Nsfl1cQ9CZ44 370 aaKnown RBP29.14■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Tnrc6bQ8BKI2 1810 aaKnown RBP29.13■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Tfip11Q9ERA6 838 aaKnown RBP29.13■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Astn2Q80Z10 1352 aa29.13■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Rfx1P48377 963 aa29.13■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Cgnl1Q6AW69 1298 aa29.13■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 GorabQ8BRM2 368 aa29.13■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 HnrnpuQ8VEK3 800 aaKnown RBP29.13■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 1700019A02RikA0A087WPV9 146 aa29.12■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Aifm3Q3TY86 605 aa29.11■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Eif4g2Q62448 906 aaKnown RBP29.11■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Ssh1Q76I79 1042 aa29.11■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Triml2E9PW10 424 aa29.1■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Ccdc146E9Q9F7 977 aa29.1■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Slit3Q9WVB4 1523 aa29.1■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Rab11fip3Q8CHD8 1047 aa29.1■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Aldh1l2Q8K009 923 aa29.09■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Kif20bQ80WE4 1774 aaKnown RBP29.09■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Med1Q925J9 1575 aa29.08■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Aldh8a1Q8BH00 487 aa29.08■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 Ncapd2Q8K2Z4 1392 aa29.08■■■□□ 2.25
Nhlrc1-201ENSMUST00000052747 NgefQ8CHT1 710 aa29.07■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Chl1P70232 1209 aa29.06■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 PzpQ61838 1495 aa29.06■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Mcm4P49717 862 aa29.05■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Pibf1E9Q6K3 756 aa29.05■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 TmpoQ61033 693 aaKnown RBP29.05■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Sirt1Q923E4 737 aa29.05■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 FanclQ9CR14 375 aa29.05■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 4930407I10RikD3Z5T8 1512 aa29.05■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Chd2E9PZM4 1827 aaKnown RBP29.04■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Q3UJC8 639 aa29.04■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Tm6sf1P58749 370 aa29.03■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Gcc1Q9D4H2 778 aa29.03■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Mdc1Q5PSV9 1707 aa29.03■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Rsph3aQ3UFY4 516 aa29.03■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Plcb2A3KGF7 1181 aa29.02■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Fam13aQ8BGI4 693 aa29.02■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 CenppQ9CZ92 286 aa29.01■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 N4bp2F8VQG7 1678 aaKnown RBP29.01■■■□□ 2.24
Nhlrc1-201ENSMUST00000052747 Ggnbp2Q5SV77 696 aa29.01■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Znf335A2A5K6 1337 aa29■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Fgd1P52734 960 aa29■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Adgrb1Q3UHD1 1582 aa29■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Ddit3P35639 168 aa29■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Dnttip2Q8R2M2 758 aaKnown RBP28.99■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Kdm4cQ8VCD7 1054 aa28.99■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 CemipQ8BI06 1361 aa28.98■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 4933402E13RikQ9D4D2 429 aa28.98■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 NalcnQ8BXR5 1738 aa28.98■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Prkar2bP31324 416 aa28.97■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Mcm2P97310 904 aa28.97■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Amer1Q7TS75 1132 aa28.97■■■□□ 2.23
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms