RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Fam135bQ9DAI6 1403 aa10.8□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Camta1A2A891 1682 aa10.8□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Vamp4O70480 141 aa10.8□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Plekhm2Q80TQ5 1018 aa10.8□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Irx6Q9ER75 438 aa10.8□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Stk31Q99MW1 1018 aa10.8□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Ap3b2Q9JME5 1082 aa10.8□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 D430041D05RikF6ZGR6 1678 aa10.79□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Q3UPC7 1272 aa10.79□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Ddx17Q501J6 650 aaKnown RBP10.79□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Ipo9Q91YE6 1041 aa10.79□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 KarsQ99MN1 595 aaKnown RBP10.79□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Parp14Q2EMV9 1817 aa10.79□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Atp7bQ64446 1462 aa10.79□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Eya1P97767 591 aa10.79□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 PaskQ8CEE6 1383 aa10.79□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 GphnQ8BUV3 769 aaKnown RBP10.78□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 C3P01027 1663 aa10.78□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 C5P06684 1680 aa10.78□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Astn2Q80Z10 1352 aa10.78□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Topaz1E5FYH1 1653 aa10.78□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 Arap3Q8R5G7 1538 aa10.78□□□□□ -0.68
Ptchd1-201ENSMUST00000038665 TmpoQ61033 693 aaKnown RBP10.77□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Ak7Q9D2H2 614 aa10.77□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Kif20bQ80WE4 1774 aaKnown RBP10.77□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Als2Q920R0 1651 aa10.76□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Evi5lH3BKQ3 813 aa10.76□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Med1Q925J9 1575 aa10.76□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 NudcO35685 332 aaKnown RBP10.76□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Tnnt1O88346 262 aa10.76□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Eif2s2Q99L45 331 aaKnown RBP10.76□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Spef2Q8C9J3 1734 aa10.76□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Ubr1O70481 1757 aa10.75□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Cdk12Q14AX6 1484 aaKnown RBP10.75□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Map2P20357 1828 aa10.75□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Gnai1B2RSH2 354 aa10.75□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 CanxP35564 591 aaKnown RBP10.75□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Sirt1Q923E4 737 aa10.75□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Gnai3Q9DC51 354 aa10.75□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 NalcnQ8BXR5 1738 aa10.75□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Hoxc9P09633 260 aa10.74□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Dnajc5P60904 198 aa10.74□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Col16a1Q8BLX7 1580 aa10.74□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Hoxb7P09024 217 aa10.74□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Sipa1l2Q80TE4 1722 aa10.73□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Ccdc183A2AJB1 534 aa10.73□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Nkx1-2P42580 305 aa10.73□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 GnpatP98192 678 aa10.73□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Amotl2Q8K371 772 aa10.73□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Znf541Q0GGX2 1363 aa10.73□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Tns3Q5SSZ5 1440 aa10.73□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Ccdc171E9Q1U1 1324 aa10.72□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 CemipQ8BI06 1361 aa10.72□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Pip4k2bQ80XI4 416 aa10.72□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Ciz1Q8VEH2 845 aa10.72□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Ric3Q8BPM6 367 aa10.71□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Ncbp3Q8BZR9 615 aaKnown RBP10.71□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Cc2d1aQ8K1A6 943 aa10.71□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Sart3Q9JLI8 962 aaKnown RBP10.71□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 PtprvP70289 1705 aa10.71□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Kif24Q6NWW5 1356 aa10.71□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Aldh1l1Q8R0Y6 902 aa10.71□□□□□ -0.69
Ptchd1-201ENSMUST00000038665 Fyb1O35601 819 aa10.71□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Nkx2-3P97334 362 aa10.71□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Dnajc10Q9DC23 793 aa10.71□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Mdc1Q5PSV9 1707 aa10.7□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Mon2Q80TL7 1715 aa10.7□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Hsp90ab1P11499 724 aaKnown RBP10.7□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Fam83gQ5SWY7 812 aa10.7□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Slain2Q8CI08 581 aa10.7□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Rims2Q9EQZ7 1530 aa10.69□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Ppp2r3aB2RXC8 1150 aa10.69□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Cyp2d12Q8BVD2 504 aa10.69□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 MvpQ9EQK5 861 aa10.69□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Znf335A2A5K6 1337 aa10.69□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Triml2E9PW10 424 aa10.69□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Bcl9Q9D219 1425 aa10.68□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Ankrd44B2RXR6 993 aa10.68□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Rtf1A2AQ19 715 aaKnown RBP10.68□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Cog6Q8R3I3 657 aa10.68□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Iqcf3Q9D498 203 aa10.68□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Tet3Q8BG87 1668 aa10.68□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Tmem2Q5FWI3 1383 aa10.68□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Scn7aB1AYL1 1681 aa10.67□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Mfap1aC0HKD8 439 aaKnown RBP10.67□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Mfap1bC0HKD9 439 aaKnown RBP10.67□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Ipo8Q7TMY7 1010 aa10.67□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 TatQ8QZR1 454 aa10.67□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Thsd7aQ69ZU6 1645 aa10.67□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Arhgef1Q61210 920 aaKnown RBP10.66□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Smarca5Q91ZW3 1051 aaKnown RBP10.66□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Col14a1Q80X19 1797 aa10.66□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 MarsQ68FL6 902 aaKnown RBP10.66□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Amigo3Q8C2S7 508 aa10.66□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Ahnak2E9PYB0 1738 aaKnown RBP10.66□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Wdr17E9Q271 1322 aa10.66□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Bcl2l13P59017 434 aa10.65□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Alpk3Q924C5 1678 aa10.65□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 DiexfQ8BTT6 772 aaKnown RBP10.65□□□□□ -0.7
Ptchd1-201ENSMUST00000038665 Kif18aQ91WD7 886 aa10.65□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms