RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Atp2b2Q9R0K7 1198 aa18.77■□□□□ 0.6
Nup54-201ENSMUST00000038514 Ankrd44B2RXR6 993 aa18.76■□□□□ 0.59
Nup54-201ENSMUST00000038514 Wdr63B2RY71 923 aa18.76■□□□□ 0.59
Nup54-201ENSMUST00000038514 Il4rP16382 810 aa18.76■□□□□ 0.59
Nup54-201ENSMUST00000038514 Tmco5bQ80X59 307 aa18.76■□□□□ 0.59
Nup54-201ENSMUST00000038514 Nwd1A6H603 1563 aa18.76■□□□□ 0.59
Nup54-201ENSMUST00000038514 Kif1aP33173 1695 aa18.74■□□□□ 0.59
Nup54-201ENSMUST00000038514 Itsn1Q9Z0R4 1714 aa18.74■□□□□ 0.59
Nup54-201ENSMUST00000038514 Rfx1P48377 963 aa18.74■□□□□ 0.59
Nup54-201ENSMUST00000038514 Plcb2A3KGF7 1181 aa18.73■□□□□ 0.59
Nup54-201ENSMUST00000038514 Rsph3aQ3UFY4 516 aa18.73■□□□□ 0.59
Nup54-201ENSMUST00000038514 Tbc1d9Q3UYK3 1264 aa18.73■□□□□ 0.59
Nup54-201ENSMUST00000038514 Utp14aQ640M1 767 aaKnown RBP18.73■□□□□ 0.59
Nup54-201ENSMUST00000038514 Q9D9H8 365 aa18.72■□□□□ 0.59
Nup54-201ENSMUST00000038514 Ppp1r15aP17564 657 aa18.71■□□□□ 0.59
Nup54-201ENSMUST00000038514 Chmp4bQ9D8B3 224 aaKnown RBP18.71■□□□□ 0.59
Nup54-201ENSMUST00000038514 Uhrf1bp1lA2RSJ4 1457 aa18.71■□□□□ 0.59
Nup54-201ENSMUST00000038514 Kif20bQ80WE4 1774 aaKnown RBP18.71■□□□□ 0.59
Nup54-201ENSMUST00000038514 Gnai1B2RSH2 354 aa18.7■□□□□ 0.58
Nup54-201ENSMUST00000038514 Trim27Q62158 513 aa18.7■□□□□ 0.58
Nup54-201ENSMUST00000038514 Kdm4cQ8VCD7 1054 aa18.7■□□□□ 0.58
Nup54-201ENSMUST00000038514 Gnai3Q9DC51 354 aa18.7■□□□□ 0.58
Nup54-201ENSMUST00000038514 Tfip11Q9ERA6 838 aaKnown RBP18.7■□□□□ 0.58
Nup54-201ENSMUST00000038514 Map3k19E9Q3S4 1311 aa18.7■□□□□ 0.58
Nup54-201ENSMUST00000038514 Synj2Q9D2G5 1434 aa18.7■□□□□ 0.58
Nup54-201ENSMUST00000038514 Isy1Q69ZQ2 285 aaKnown RBP18.69■□□□□ 0.58
Nup54-201ENSMUST00000038514 CarsQ9ER72 831 aaKnown RBP18.69■□□□□ 0.58
Nup54-201ENSMUST00000038514 Ecm2Q5FW85 670 aa18.69■□□□□ 0.58
Nup54-201ENSMUST00000038514 Nek4Q9Z1J2 792 aa18.68■□□□□ 0.58
Nup54-201ENSMUST00000038514 Cavin2Q63918 418 aaKnown RBP18.66■□□□□ 0.58
Nup54-201ENSMUST00000038514 Birc3O08863 600 aa18.65■□□□□ 0.58
Nup54-201ENSMUST00000038514 GorabQ8BRM2 368 aa18.65■□□□□ 0.58
Nup54-201ENSMUST00000038514 Rrp9Q91WM3 475 aaKnown RBP18.65■□□□□ 0.58
Nup54-201ENSMUST00000038514 Zc3h13E9Q784 1729 aaKnown RBP18.65■□□□□ 0.58
Nup54-201ENSMUST00000038514 MarsQ68FL6 902 aaKnown RBP18.64■□□□□ 0.58
Nup54-201ENSMUST00000038514 Cgnl1Q6AW69 1298 aa18.64■□□□□ 0.58
Nup54-201ENSMUST00000038514 Sos1Q62245 1319 aa18.64■□□□□ 0.57
Nup54-201ENSMUST00000038514 Aldh8a1Q8BH00 487 aa18.63■□□□□ 0.57
Nup54-201ENSMUST00000038514 Usp16Q99LG0 825 aa18.62■□□□□ 0.57
Nup54-201ENSMUST00000038514 Dmrtc1Q9D9R7 182 aa18.62■□□□□ 0.57
Nup54-201ENSMUST00000038514 Paxip1Q6NZQ4 1056 aa18.62■□□□□ 0.57
Nup54-201ENSMUST00000038514 1700010I14RikQ7TPG0 532 aa18.62■□□□□ 0.57
Nup54-201ENSMUST00000038514 EngaseQ8BX80 734 aa18.62■□□□□ 0.57
Nup54-201ENSMUST00000038514 Rsph6aQ8CDR2 708 aa18.62■□□□□ 0.57
Nup54-201ENSMUST00000038514 CenppQ9CZ92 286 aa18.62■□□□□ 0.57
Nup54-201ENSMUST00000038514 Senp3Q9EP97 568 aaKnown RBP18.61■□□□□ 0.57
Nup54-201ENSMUST00000038514 Cabp2Q9JLK4 216 aa18.61■□□□□ 0.57
Nup54-201ENSMUST00000038514 Kif24Q6NWW5 1356 aa18.61■□□□□ 0.57
Nup54-201ENSMUST00000038514 Mcm10Q0VBD2 885 aa18.6■□□□□ 0.57
Nup54-201ENSMUST00000038514 Eif4g2Q62448 906 aaKnown RBP18.6■□□□□ 0.57
Nup54-201ENSMUST00000038514 Anapc15-psA0A140T8L6 141 aa18.6■□□□□ 0.57
Nup54-201ENSMUST00000038514 Aldh1l2Q8K009 923 aa18.6■□□□□ 0.57
Nup54-201ENSMUST00000038514 Ric3Q8BPM6 367 aa18.59■□□□□ 0.57
Nup54-201ENSMUST00000038514 HnrnpuQ8VEK3 800 aaKnown RBP18.59■□□□□ 0.57
Nup54-201ENSMUST00000038514 Chd4Q6PDQ2 1915 aaKnown RBP18.58■□□□□ 0.57
Nup54-201ENSMUST00000038514 Mdc1Q5PSV9 1707 aa18.58■□□□□ 0.57
Nup54-201ENSMUST00000038514 Dip2aQ8BWT5 1523 aa18.58■□□□□ 0.57
Nup54-201ENSMUST00000038514 Ccdc146E9Q9F7 977 aa18.58■□□□□ 0.56
Nup54-201ENSMUST00000038514 DekQ7TNV0 380 aaKnown RBP18.58■□□□□ 0.56
Nup54-201ENSMUST00000038514 Gcc1Q9D4H2 778 aa18.58■□□□□ 0.56
Nup54-201ENSMUST00000038514 Pknox2Q8BG99 474 aa18.57■□□□□ 0.56
Nup54-201ENSMUST00000038514 Bloc1s4Q8VED2 215 aa18.57■□□□□ 0.56
Nup54-201ENSMUST00000038514 4930407I10RikD3Z5T8 1512 aa18.57■□□□□ 0.56
Nup54-201ENSMUST00000038514 Casq1O09165 405 aa18.57■□□□□ 0.56
Nup54-201ENSMUST00000038514 SlkO54988 1233 aa18.57■□□□□ 0.56
Nup54-201ENSMUST00000038514 Klhdc4Q921I2 584 aa18.57■□□□□ 0.56
Nup54-201ENSMUST00000038514 Adgrb1Q3UHD1 1582 aa18.57■□□□□ 0.56
Nup54-201ENSMUST00000038514 U2surpQ6NV83 1029 aaKnown RBP18.56■□□□□ 0.56
Nup54-201ENSMUST00000038514 Gemin5Q8BX17 1502 aaKnown RBP18.56■□□□□ 0.56
Nup54-201ENSMUST00000038514 PtpruB1AUH1 1446 aa18.56■□□□□ 0.56
Nup54-201ENSMUST00000038514 Tm6sf1P58749 370 aa18.56■□□□□ 0.56
Nup54-201ENSMUST00000038514 FanclQ9CR14 375 aa18.56■□□□□ 0.56
Nup54-201ENSMUST00000038514 Cdk12Q14AX6 1484 aaKnown RBP18.56■□□□□ 0.56
Nup54-201ENSMUST00000038514 Tet3Q8BG87 1668 aa18.56■□□□□ 0.56
Nup54-201ENSMUST00000038514 Ppip5k2Q6ZQB6 1129 aa18.55■□□□□ 0.56
Nup54-201ENSMUST00000038514 Bag4Q8CI61 457 aa18.55■□□□□ 0.56
Nup54-201ENSMUST00000038514 Ppp6r3Q922D4 844 aa18.55■□□□□ 0.56
Nup54-201ENSMUST00000038514 Mcm2P97310 904 aa18.55■□□□□ 0.56
Nup54-201ENSMUST00000038514 Rab11fip3Q8CHD8 1047 aa18.55■□□□□ 0.56
Nup54-201ENSMUST00000038514 Triml2E9PW10 424 aa18.54■□□□□ 0.56
Nup54-201ENSMUST00000038514 Idi2Q8BFZ6 227 aa18.54■□□□□ 0.56
Nup54-201ENSMUST00000038514 Tmx3Q8BXZ1 456 aa18.54■□□□□ 0.56
Nup54-201ENSMUST00000038514 Nucb1Q02819 459 aaKnown RBP18.53■□□□□ 0.56
Nup54-201ENSMUST00000038514 Fam13aQ8BGI4 693 aa18.53■□□□□ 0.56
Nup54-201ENSMUST00000038514 Pdia3P27773 505 aaKnown RBP18.53■□□□□ 0.56
Nup54-201ENSMUST00000038514 Asxl2Q8BZ32 1370 aa18.52■□□□□ 0.56
Nup54-201ENSMUST00000038514 Med1Q925J9 1575 aa18.52■□□□□ 0.56
Nup54-201ENSMUST00000038514 Hoxb7P09024 217 aa18.52■□□□□ 0.56
Nup54-201ENSMUST00000038514 Aifm3Q3TY86 605 aa18.52■□□□□ 0.56
Nup54-201ENSMUST00000038514 Znf316Q6PGE4 1016 aa18.52■□□□□ 0.56
Nup54-201ENSMUST00000038514 Ercc6l2Q9JIM3 1537 aa18.52■□□□□ 0.56
Nup54-201ENSMUST00000038514 Tnrc6bQ8BKI2 1810 aaKnown RBP18.52■□□□□ 0.55
Nup54-201ENSMUST00000038514 Phf23Q8BSN5 401 aa18.52■□□□□ 0.55
Nup54-201ENSMUST00000038514 Cps1Q8C196 1500 aa18.51■□□□□ 0.55
Nup54-201ENSMUST00000038514 Elp1Q7TT37 1333 aaKnown RBP18.51■□□□□ 0.55
Nup54-201ENSMUST00000038514 RictorQ6QI06 1708 aa18.51■□□□□ 0.55
Nup54-201ENSMUST00000038514 Chl1P70232 1209 aa18.5■□□□□ 0.55
Nup54-201ENSMUST00000038514 Gm156Q58A37 223 aa18.5■□□□□ 0.55
Nup54-201ENSMUST00000038514 Afap1Q80YS6 731 aa18.5■□□□□ 0.55
Nup54-201ENSMUST00000038514 Trim44Q9QXA7 346 aa18.5■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms