RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 MvpQ9EQK5 861 aa23.13■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Synj2Q9D2G5 1434 aa23.11■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 U2surpQ6NV83 1029 aaKnown RBP23.11■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Ankrd44B2RXR6 993 aa23.11■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Rsph6aQ8CDR2 708 aa23.1■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Usp16Q99LG0 825 aa23.1■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Ppp1r18Q8BQ30 594 aa23.08■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Rfx1P48377 963 aa23.08■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Tfip11Q9ERA6 838 aaKnown RBP23.07■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Wdr63B2RY71 923 aa23.07■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Gnai1B2RSH2 354 aa23.06■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Gnai3Q9DC51 354 aa23.06■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Aifm3Q3TY86 605 aa23.06■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Dmrtc1Q9D9R7 182 aa23.06■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Spef2Q8C9J3 1734 aa23.06■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Ddit3P35639 168 aa23.05■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Trim27Q62158 513 aa23.05■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Ssh1Q76I79 1042 aa23.05■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 GorabQ8BRM2 368 aa23.05■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Tbc1d9Q3UYK3 1264 aa23.05■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Chd4Q6PDQ2 1915 aaKnown RBP23.04■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Zc3h13E9Q784 1729 aaKnown RBP23.03■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 LifrP42703 1092 aa23.03■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 KnstrnQ9D9Z1 312 aaKnown RBP23.03■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 CarsQ9ER72 831 aaKnown RBP23.03■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Nek4Q9Z1J2 792 aa23.03■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 MpripP97434 1024 aa23.02■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Gm10093D3YYI8 482 aa23.01■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Hdac1O09106 482 aaKnown RBP23.01■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Idi2Q8BFZ6 227 aa23.01■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Kif1aP33173 1695 aa23.01■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Psme1P97371 249 aa23■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 MarsQ68FL6 902 aaKnown RBP23■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Kif24Q6NWW5 1356 aa23■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Dip2aQ8BWT5 1523 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 1700019A02RikA0A087WPV9 146 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Eif4a2P10630 407 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Mcm4P49717 862 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Wwc1Q5SXA9 1104 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Txndc2Q6P902 515 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Amer1Q7TS75 1132 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Ric3Q8BPM6 367 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Ccdc146E9Q9F7 977 aa22.98■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 PtpruB1AUH1 1446 aa22.97■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Pibf1E9Q6K3 756 aa22.97■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 FanclQ9CR14 375 aa22.97■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 RictorQ6QI06 1708 aa22.97■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Pik3c2bE9QAN8 1632 aa22.97■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 NpatQ8BMA5 1420 aa22.96■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Triml2E9PW10 424 aa22.95■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Dnttip2Q8R2M2 758 aaKnown RBP22.95■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Il4rP16382 810 aa22.95■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Stk11ipQ3TAA7 1072 aa22.95■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Cetn4Q8K4K1 168 aa22.94■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Ipo4Q8VI75 1082 aa22.94■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Gemin5Q8BX17 1502 aaKnown RBP22.94■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Smarca5Q91ZW3 1051 aaKnown RBP22.94■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 HnrnpmQ9D0E1 729 aaKnown RBP22.94■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Plcb2A3KGF7 1181 aa22.93■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Kif20bQ80WE4 1774 aaKnown RBP22.93■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Dnajc5gQ8C632 165 aa22.92■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 4930407I10RikD3Z5T8 1512 aa22.91■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Snap23O09044 210 aa22.91■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 CatipB9EKE5 520 aa22.91■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Stk31Q99MW1 1018 aa22.9■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Ggnbp2Q5SV77 696 aa22.9■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Cavin2Q63918 418 aaKnown RBP22.9■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 NgefQ8CHT1 710 aa22.9■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Kcnn1Q9EQR3 537 aa22.89■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Dip2bQ3UH60 1574 aa22.88■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Prim1P20664 417 aa22.88■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Fam13aQ8BGI4 693 aa22.88■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Sos1Q62245 1319 aa22.87■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Chl1P70232 1209 aa22.87■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Cps1Q8C196 1500 aa22.87■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Tet3Q8BG87 1668 aa22.86■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 EngaseQ8BX80 734 aa22.86■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Eif4g2Q62448 906 aaKnown RBP22.86■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Tnrc6bQ8BKI2 1810 aaKnown RBP22.86■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Rsph4aQ8BYM7 716 aa22.85■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Adgrb1Q3UHD1 1582 aa22.84■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Aldh8a1Q8BH00 487 aa22.84■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Tm6sf1P58749 370 aa22.84■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Rab11fip3Q8CHD8 1047 aa22.84■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 CenppQ9CZ92 286 aa22.84■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Med1Q925J9 1575 aa22.83■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Prkar2bP31324 416 aa22.83■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 CalcaP70160 136 aa22.83■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Ppp6r3Q922D4 844 aa22.83■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Mdc1Q5PSV9 1707 aa22.83■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Ncapd2Q8K2Z4 1392 aa22.83■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Hoxb7P09024 217 aa22.83■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Rsph3aQ3UFY4 516 aa22.83■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 TmpoQ61033 693 aaKnown RBP22.83■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Phf23Q8BSN5 401 aa22.83■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Chmp4bQ9D8B3 224 aaKnown RBP22.83■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Kdm4cQ8VCD7 1054 aa22.82■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Cc2d1aQ8K1A6 943 aa22.81■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Fgd1P52734 960 aa22.81■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Parp14Q2EMV9 1817 aa22.8■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms