RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 UNC45BQ8IWX7 931 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 CRYBG2Q8N1P7 616 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 C12orf29Q8N999 325 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 PCDH19Q8TAB3 1148 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 ART4Q93070 314 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 LMLNQ96KR4 655 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 CCDC114Q96M63 670 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 TEFMQ96QE5 360 aaKnown RBP9.9□□□□□ -0.82
CAPN3-216ENST00000567071 MFRPQ9BY79 579 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 GTPBP4Q9BZE4 634 aaKnown RBP9.9□□□□□ -0.82
CAPN3-216ENST00000567071 TRIT1Q9H3H1 467 aaKnown RBP9.9□□□□□ -0.82
CAPN3-216ENST00000567071 SEMA6CQ9H3T2 930 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 CBX8Q9HC52 389 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.9□□□□□ -0.82
CAPN3-216ENST00000567071 SLC39A1Q9NY26 324 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 RRN3Q9NYV6 651 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 APPL1Q9UKG1 709 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 BOLA1Q9Y3E2 137 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 B3GALT1Q9Y5Z6 326 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 USP3Q9Y6I4 520 aa9.9□□□□□ -0.82
CAPN3-216ENST00000567071 OAS3Q9Y6K5 1087 aaKnown RBP9.9□□□□□ -0.82
CAPN3-216ENST00000567071 TNRC6AQ8NDV7 1962 aaKnown RBP9.89□□□□□ -0.83
CAPN3-216ENST00000567071 EIF3DO15371 548 aaKnown RBP eCLIP9.89□□□□□ -0.83
CAPN3-216ENST00000567071 BNIP3LO60238 219 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 PAK4O96013 591 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-216ENST00000567071 CD1EP15812 388 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 PNLIPP16233 465 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 GLB1P16278 677 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 ITGA3P26006 1051 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 CSTF2P33240 577 aaKnown RBP eCLIP9.89□□□□□ -0.83
CAPN3-216ENST00000567071 HOXD13P35453 343 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 PMS2P54278 862 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 RAB15P59190 212 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 PPARDQ03181 441 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 CENPCQ03188 943 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 ABHD18Q0P651 414 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 NR6A1Q15406 480 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 TESK1Q15569 626 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 ARHGAP44Q17R89 818 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 NADK2Q4G0N4 442 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 C14orf28Q4W4Y0 310 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 TMEM259Q4ZIN3 620 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 ATP1A1-AS1Q5TC04 95 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 STXBP4Q6ZWJ1 553 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 SPRED1Q7Z699 444 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 LUZP1Q86V48 1076 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 UNC93AQ86WB7 457 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 CBWD2Q8IUF1 395 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 NRSN1Q8IZ57 195 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 GUF1Q8N442 669 aaKnown RBP9.89□□□□□ -0.83
CAPN3-216ENST00000567071 AGBL5Q8NDL9 886 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 HDAC11Q96DB2 347 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 CYFIP2Q96F07 1278 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 FEM1CQ96JP0 617 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 TCEAL2Q9H3H9 227 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-216ENST00000567071 SLC25A13Q9UJS0 675 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 ZFR2Q9UPR6 939 aaKnown RBP9.89□□□□□ -0.83
CAPN3-216ENST00000567071 NBEAL1Q6ZS30 2694 aa9.89□□□□□ -0.83
CAPN3-216ENST00000567071 LOC101059948A0A1B0GTJ6 334 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 BECN2A8MW95 431 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 MCF2LO15068 1137 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 CPNE6O95741 557 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 FGF3P11487 239 aaPredicted RBP9.88□□□□□ -0.83
CAPN3-216ENST00000567071 CLCN1P35523 988 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 PPP1R2P41236 205 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 PMS1P54277 932 aaKnown RBP9.88□□□□□ -0.83
CAPN3-216ENST00000567071 HDAC4P56524 1084 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 MYL5Q02045 173 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 BIRC3Q13489 604 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 SLC12A1Q13621 1099 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 IQCB1Q15051 598 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 COBLL1Q53SF7 1204 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 HSP90AA4PQ58FG1 418 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 MMS22LQ6ZRQ5 1243 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 UNC5BQ8IZJ1 945 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 DHTKD1Q96HY7 919 aaPredicted RBP9.88□□□□□ -0.83
CAPN3-216ENST00000567071 PPP1R16AQ96I34 528 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 MED15Q96RN5 788 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 BPIFA3Q9BQP9 254 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 CLPBQ9H078 707 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 XYLT2Q9H1B5 865 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 VRTNQ9H8Y1 702 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 RWDD2AQ9UIY3 292 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 PILRAQ9UKJ1 303 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 DCHS2Q6V1P9 2916 aa9.88□□□□□ -0.83
CAPN3-216ENST00000567071 CROCCQ5TZA2 2017 aa9.87□□□□□ -0.83
CAPN3-216ENST00000567071 GOLGA6L7A0A1B0GV03 622 aa9.87□□□□□ -0.83
CAPN3-216ENST00000567071 A6NCN8 305 aa9.87□□□□□ -0.83
CAPN3-216ENST00000567071 GOLGA6L3A6NEY3 463 aa9.87□□□□□ -0.83
CAPN3-216ENST00000567071 ANKUB1A6NFN9 424 aa9.87□□□□□ -0.83
CAPN3-216ENST00000567071 SPINT1O43278 529 aa9.87□□□□□ -0.83
CAPN3-216ENST00000567071 ACSL4O60488 711 aa9.87□□□□□ -0.83
CAPN3-216ENST00000567071 LUC7L3O95232 432 aaKnown RBP9.87□□□□□ -0.83
CAPN3-216ENST00000567071 ERCC5P28715 1186 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-216ENST00000567071 ARSDP51689 593 aa9.87□□□□□ -0.83
CAPN3-216ENST00000567071 SLC8A3P57103 927 aa9.87□□□□□ -0.83
CAPN3-216ENST00000567071 TRA2AQ13595 282 aaKnown RBP eCLIP9.87□□□□□ -0.83
CAPN3-216ENST00000567071 CLPPQ16740 277 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-216ENST00000567071 TPD52L1Q16890 204 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-216ENST00000567071 KNOP1Q1ED39 458 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms