RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W VPS20Q04272 221 aa7.87□□□□□ -1.15
SMK1YPR054W HRQ1Q05549 1077 aa7.87□□□□□ -1.15
SMK1YPR054W NKP2Q06162 153 aa7.87□□□□□ -1.15
SMK1YPR054W RTT109Q07794 436 aa7.87□□□□□ -1.15
SMK1YPR054W TY1B-NL2Q99337 1749 aaKnown RBP7.86□□□□□ -1.15
SMK1YPR054W DEF1P35732 738 aaKnown RBP7.86□□□□□ -1.15
SMK1YPR054W NMD2P38798 1089 aaKnown RBP7.86□□□□□ -1.15
SMK1YPR054W THI12P42883 340 aa7.86□□□□□ -1.15
SMK1YPR054W THI5P43534 340 aa7.86□□□□□ -1.15
SMK1YPR054W THI11P47183 340 aa7.86□□□□□ -1.15
SMK1YPR054W YGL081WP53156 320 aa7.86□□□□□ -1.15
SMK1YPR054W UTP13Q05946 817 aaKnown RBP7.86□□□□□ -1.15
SMK1YPR054W THI13Q07748 340 aa7.86□□□□□ -1.15
SMK1YPR054W SWE1P32944 819 aa7.85□□□□□ -1.15
SMK1YPR054W YNL108CP53929 270 aa7.85□□□□□ -1.15
SMK1YPR054W BCK1Q01389 1478 aa7.85□□□□□ -1.15
SMK1YPR054W LYS2P07702 1392 aa7.84□□□□□ -1.15
SMK1YPR054W BIK1P11709 440 aa7.84□□□□□ -1.15
SMK1YPR054W KAR2P16474 682 aaKnown RBP7.84□□□□□ -1.15
SMK1YPR054W AFT1P22149 690 aa7.84□□□□□ -1.15
SMK1YPR054W CWH41P53008 833 aa7.84□□□□□ -1.15
SMK1YPR054W BMS1Q08965 1183 aaKnown RBP7.84□□□□□ -1.15
SMK1YPR054W RNR2P09938 399 aaKnown RBP7.83□□□□□ -1.16
SMK1YPR054W TEC1P18412 486 aa7.83□□□□□ -1.16
SMK1YPR054W GAR1P28007 205 aaKnown RBP7.83□□□□□ -1.16
SMK1YPR054W MRPL10P36520 322 aa7.83□□□□□ -1.16
SMK1YPR054W BRN1P38170 754 aa7.83□□□□□ -1.16
SMK1YPR054W SIC1P38634 284 aa7.83□□□□□ -1.16
SMK1YPR054W MRS2Q01926 470 aa7.83□□□□□ -1.16
SMK1YPR054W YOL087CQ99247 1116 aa7.83□□□□□ -1.16
SMK1YPR054W ISF1P32488 338 aa7.82□□□□□ -1.16
SMK1YPR054W HXT13P39924 564 aa7.82□□□□□ -1.16
SMK1YPR054W BIM1P40013 344 aa7.82□□□□□ -1.16
SMK1YPR054W APP1P53933 587 aa7.82□□□□□ -1.16
SMK1YPR054W TIM50Q02776 476 aa7.82□□□□□ -1.16
SMK1YPR054W YPR084WQ06821 456 aa7.82□□□□□ -1.16
SMK1YPR054W APC11Q12157 165 aa7.82□□□□□ -1.16
SMK1YPR054W AUS1Q08409 1394 aa7.82□□□□□ -1.16
SMK1YPR054W TAF13P11747 167 aa7.81□□□□□ -1.16
SMK1YPR054W ATG32P40458 529 aa7.81□□□□□ -1.16
SMK1YPR054W PRP3Q03338 469 aaPredicted RBP7.81□□□□□ -1.16
SMK1YPR054W MFT1P33441 392 aaKnown RBP7.8□□□□□ -1.16
SMK1YPR054W DID4P36108 232 aa7.8□□□□□ -1.16
SMK1YPR054W MSH4P40965 878 aaPredicted RBP7.8□□□□□ -1.16
SMK1YPR054W SML1Q04964 104 aa7.8□□□□□ -1.16
SMK1YPR054W IPL1P38991 367 aa7.79□□□□□ -1.16
SMK1YPR054W ALD4P46367 519 aaKnown RBP7.79□□□□□ -1.16
SMK1YPR054W YJR115WP47152 169 aa7.79□□□□□ -1.16
SMK1YPR054W HGH1P48362 394 aaKnown RBP7.79□□□□□ -1.16
SMK1YPR054W YGL140CP53120 1219 aa7.79□□□□□ -1.16
SMK1YPR054W MSH3P25336 1018 aa7.78□□□□□ -1.16
SMK1YPR054W MSH1P25846 959 aa7.78□□□□□ -1.16
SMK1YPR054W MNR2P35724 969 aa7.78□□□□□ -1.16
SMK1YPR054W BYE1P36106 594 aa7.78□□□□□ -1.16
SMK1YPR054W RFC1P38630 861 aaKnown RBP7.78□□□□□ -1.16
SMK1YPR054W RTT107P38850 1070 aa7.78□□□□□ -1.16
SMK1YPR054W HXT17P53631 564 aa7.78□□□□□ -1.16
SMK1YPR054W PAP2P53632 584 aaKnown RBP7.78□□□□□ -1.16
SMK1YPR054W TAP42Q04372 366 aa7.78□□□□□ -1.16
SMK1YPR054W PEX19Q07418 342 aa7.78□□□□□ -1.16
SMK1YPR054W ENO2P00925 437 aaKnown RBP7.77□□□□□ -1.17
SMK1YPR054W MRC1P25588 1096 aa7.77□□□□□ -1.17
SMK1YPR054W UGA3P26370 528 aa7.77□□□□□ -1.17
SMK1YPR054W TYS1P36421 394 aaKnown RBP7.77□□□□□ -1.17
SMK1YPR054W NAF1P53919 492 aaKnown RBP7.77□□□□□ -1.17
SMK1YPR054W SSL2Q00578 843 aa7.77□□□□□ -1.17
SMK1YPR054W YMR102CQ03177 834 aa7.77□□□□□ -1.17
SMK1YPR054W TRL1P09880 827 aaKnown RBP7.76□□□□□ -1.17
SMK1YPR054W SUP45P12385 437 aaKnown RBP7.76□□□□□ -1.17
SMK1YPR054W SRP54P20424 541 aaKnown RBP7.76□□□□□ -1.17
SMK1YPR054W GUT2P32191 649 aa7.76□□□□□ -1.17
SMK1YPR054W VPS41P38959 992 aa7.76□□□□□ -1.17
SMK1YPR054W EMP47P43555 445 aa7.76□□□□□ -1.17
SMK1YPR054W MRX12P47084 519 aa7.76□□□□□ -1.17
SMK1YPR054W MCM16Q12262 181 aa7.76□□□□□ -1.17
SMK1YPR054W SES1P07284 462 aaKnown RBP7.75□□□□□ -1.17
SMK1YPR054W GBP2P25555 427 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
SMK1YPR054W SPT5P27692 1063 aaKnown RBP7.75□□□□□ -1.17
SMK1YPR054W MET22P32179 357 aa7.75□□□□□ -1.17
SMK1YPR054W NPR3P38742 1146 aa7.75□□□□□ -1.17
SMK1YPR054W YNG2P38806 282 aaKnown RBP7.75□□□□□ -1.17
SMK1YPR054W VPS4P52917 437 aa7.75□□□□□ -1.17
SMK1YPR054W RPN7Q06103 429 aaKnown RBP7.75□□□□□ -1.17
SMK1YPR054W HIM1Q06674 414 aa7.75□□□□□ -1.17
SMK1YPR054W DUR1,2P32528 1835 aaKnown RBP7.74□□□□□ -1.17
SMK1YPR054W SPT2P06843 333 aaPredicted RBP7.74□□□□□ -1.17
SMK1YPR054W TIF1P10081 395 aaKnown RBP7.74□□□□□ -1.17
SMK1YPR054W ELM1P32801 640 aa7.74□□□□□ -1.17
SMK1YPR054W MRT4P33201 236 aaKnown RBP7.74□□□□□ -1.17
SMK1YPR054W CCT5P40413 562 aaKnown RBP7.74□□□□□ -1.17
SMK1YPR054W PRP31P49704 494 aaPredicted RBP7.74□□□□□ -1.17
SMK1YPR054W SPO1P53541 631 aa7.74□□□□□ -1.17
SMK1YPR054W STE20Q03497 939 aaKnown RBP7.74□□□□□ -1.17
SMK1YPR054W PET111P08468 800 aa7.73□□□□□ -1.17
SMK1YPR054W CDC16P09798 840 aa7.73□□□□□ -1.17
SMK1YPR054W ATE1P16639 503 aa7.73□□□□□ -1.17
SMK1YPR054W MSB3P48566 633 aaPredicted RBP7.73□□□□□ -1.17
SMK1YPR054W YGL082WP53155 381 aa7.73□□□□□ -1.17
SMK1YPR054W TLG2Q08144 397 aa7.73□□□□□ -1.17
SMK1YPR054W YKL068W-AQ3E826 78 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms