RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	RPC31	P17890	251 aa		2.88	□□□□□ -1.95
RLM1	YPL089C	VMA3	P25515	160 aa		2.88	□□□□□ -1.95
RLM1	YPL089C	SEA4	P38164	1038 aa		2.88	□□□□□ -1.95
RLM1	YPL089C	YML122C	Q03207	126 aa		2.88	□□□□□ -1.95
RLM1	YPL089C	FLR1	P38124	548 aa		2.88	□□□□□ -1.95
RLM1	YPL089C	QDR2	P40474	542 aa		2.88	□□□□□ -1.95
RLM1	YPL089C	FOX2	Q02207	900 aa	Known RBP	2.88	□□□□□ -1.95
RLM1	YPL089C	CUS1	Q02554	436 aa	Predicted RBP	2.88	□□□□□ -1.95
RLM1	YPL089C	PNP1	Q05788	311 aa		2.88	□□□□□ -1.95
RLM1	YPL089C	ISC10	P32645	267 aa		2.87	□□□□□ -1.95
RLM1	YPL089C	YNR065C	P53751	1116 aa		2.87	□□□□□ -1.95
RLM1	YPL089C	APM2	P38700	605 aa		2.86	□□□□□ -1.95
RLM1	YPL089C	DSE4	P53753	1117 aa		2.86	□□□□□ -1.95
RLM1	YPL089C	CDA2	Q06703	312 aa		2.86	□□□□□ -1.95
RLM1	YPL089C	TY4B-P	A0A0B7P3V8	1104 aa		2.86	□□□□□ -1.95
RLM1	YPL089C	SSA1	P10591	642 aa	Known RBP	2.86	□□□□□ -1.95
RLM1	YPL089C	RRN6	P32786	894 aa		2.86	□□□□□ -1.95
RLM1	YPL089C	LDH1	P38139	375 aa		2.86	□□□□□ -1.95
RLM1	YPL089C	YHL008C	P38750	627 aa		2.86	□□□□□ -1.95
RLM1	YPL089C	DYS1	P38791	387 aa		2.86	□□□□□ -1.95
RLM1	YPL089C	YNR040W	P53736	256 aa		2.86	□□□□□ -1.95
RLM1	YPL089C	YOR296W	Q08748	1289 aa		2.86	□□□□□ -1.95
RLM1	YPL089C	LSO1	Q3E827	93 aa		2.86	□□□□□ -1.95
RLM1	YPL089C	TY4A-H	Q6Q5P6	413 aa		2.86	□□□□□ -1.95
RLM1	YPL089C	BOI1	P38041	980 aa	Known RBP	2.85	□□□□□ -1.95
RLM1	YPL089C	TED1	P40533	473 aa		2.85	□□□□□ -1.95
RLM1	YPL089C	ITC1	P53125	1264 aa		2.85	□□□□□ -1.95
RLM1	YPL089C	RPL34A	P87262	121 aa	Predicted RBP	2.85	□□□□□ -1.95
RLM1	YPL089C	MSH6	Q03834	1242 aa		2.85	□□□□□ -1.95
RLM1	YPL089C	APC11	Q12157	165 aa		2.85	□□□□□ -1.95
RLM1	YPL089C	MSN1	P22148	382 aa		2.84	□□□□□ -1.95
RLM1	YPL089C	GIP1	P38229	639 aa		2.84	□□□□□ -1.95
RLM1	YPL089C	FUR4	P05316	633 aa	Known RBP	2.83	□□□□□ -1.96
RLM1	YPL089C	KTR2	P33550	425 aa		2.83	□□□□□ -1.96
RLM1	YPL089C	ISW1	P38144	1129 aa		2.83	□□□□□ -1.96
RLM1	YPL089C	BSD2	P38356	321 aa		2.83	□□□□□ -1.96
RLM1	YPL089C	BOL3	P39724	118 aa		2.83	□□□□□ -1.96
RLM1	YPL089C	HXT8	P40886	569 aa		2.83	□□□□□ -1.96
RLM1	YPL089C	NSI1	Q12457	570 aa		2.83	□□□□□ -1.96
RLM1	YPL089C	IDI1	P15496	288 aa		2.83	□□□□□ -1.96
RLM1	YPL089C	GEF1	P37020	779 aa		2.83	□□□□□ -1.96
RLM1	YPL089C	YER156C	P40093	338 aa	Known RBP	2.83	□□□□□ -1.96
RLM1	YPL089C	THI80	P35202	319 aa		2.82	□□□□□ -1.96
RLM1	YPL089C	CDC3	P32457	520 aa	Known RBP	2.81	□□□□□ -1.96
RLM1	YPL089C	GIP2	P40036	548 aa		2.81	□□□□□ -1.96
RLM1	YPL089C	YIL165C	P40446	119 aa		2.81	□□□□□ -1.96
RLM1	YPL089C	RGD2	P43556	714 aa		2.81	□□□□□ -1.96
RLM1	YPL089C	KAR5	Q04746	504 aa		2.81	□□□□□ -1.96
RLM1	YPL089C	PNS1	Q12412	539 aa		2.81	□□□□□ -1.96
RLM1	YPL089C	MRP10	O75012	95 aa		2.81	□□□□□ -1.96
RLM1	YPL089C	RPB10	P22139	70 aa		2.81	□□□□□ -1.96
RLM1	YPL089C	YBR287W	P38355	427 aa		2.81	□□□□□ -1.96
RLM1	YPL089C	FIR1	P40020	876 aa		2.81	□□□□□ -1.96
RLM1	YPL089C	NTA1	P40354	457 aa		2.81	□□□□□ -1.96
RLM1	YPL089C	SUT1	P53032	299 aa	Known RBP	2.81	□□□□□ -1.96
RLM1	YPL089C	EMG1	Q06287	252 aa	Known RBP	2.81	□□□□□ -1.96
RLM1	YPL089C	GCD1	P09032	578 aa	Predicted RBP	2.8	□□□□□ -1.96
RLM1	YPL089C	TRL1	P09880	827 aa	Known RBP	2.8	□□□□□ -1.96
RLM1	YPL089C	SMC1	P32908	1225 aa		2.8	□□□□□ -1.96
RLM1	YPL089C	ACF4	P47129	309 aa		2.8	□□□□□ -1.96
RLM1	YPL089C	TSA1	P34760	196 aa	Known RBP	2.8	□□□□□ -1.96
RLM1	YPL089C	ATG1	P53104	897 aa		2.8	□□□□□ -1.96
RLM1	YPL089C	RSC2	Q06488	889 aa		2.8	□□□□□ -1.96
RLM1	YPL089C	PRP6	P19735	899 aa	Predicted RBP	2.79	□□□□□ -1.96
RLM1	YPL089C	ABZ1	P37254	787 aa	Predicted RBP	2.79	□□□□□ -1.96
RLM1	YPL089C	GLO3	P38682	493 aa	Known RBP	2.79	□□□□□ -1.96
RLM1	YPL089C	AIM46	P38885	310 aa		2.79	□□□□□ -1.96
RLM1	YPL089C	RAD55	P38953	406 aa		2.79	□□□□□ -1.96
RLM1	YPL089C	QDR1	P40475	563 aa		2.79	□□□□□ -1.96
RLM1	YPL089C	TIF6	Q12522	245 aa	Known RBP	2.79	□□□□□ -1.96
RLM1	YPL089C	IRS4	P36115	615 aa	Known RBP	2.78	□□□□□ -1.96
RLM1	YPL089C	PSY2	P40164	858 aa		2.78	□□□□□ -1.96
RLM1	YPL089C	PPT1	P53043	513 aa		2.78	□□□□□ -1.96
RLM1	YPL089C	SOK2	P53438	785 aa	Predicted RBP	2.78	□□□□□ -1.96
RLM1	YPL089C	ERP5	P38819	212 aa		2.78	□□□□□ -1.96
RLM1	YPL089C	MDJ2	P42834	146 aa		2.78	□□□□□ -1.96
RLM1	YPL089C	UFD2	P54860	961 aa		2.78	□□□□□ -1.96
RLM1	YPL089C	RSC4	Q02206	625 aa		2.78	□□□□□ -1.96
RLM1	YPL089C	INP51	P40559	946 aa	Known RBP	2.77	□□□□□ -1.97
RLM1	YPL089C	YJL181W	P46987	611 aa		2.77	□□□□□ -1.97
RLM1	YPL089C	BIO5	P53744	561 aa	Known RBP	2.77	□□□□□ -1.97
RLM1	YPL089C	YML020W	Q03722	664 aa		2.77	□□□□□ -1.97
RLM1	YPL089C	MNL2	Q12205	849 aa		2.77	□□□□□ -1.97
RLM1	YPL089C	HAT1	Q12341	374 aa		2.77	□□□□□ -1.97
RLM1	YPL089C	YBL113C	Q7M4S9	792 aa		2.77	□□□□□ -1.97
RLM1	YPL089C	ALD3	P54114	506 aa		2.76	□□□□□ -1.97
RLM1	YPL089C	TRS120	Q04183	1289 aa		2.76	□□□□□ -1.97
RLM1	YPL089C	SOG2	Q08817	791 aa		2.76	□□□□□ -1.97
RLM1	YPL089C	HSP78	P33416	811 aa		2.76	□□□□□ -1.97
RLM1	YPL089C	TFA2	P36145	328 aa		2.76	□□□□□ -1.97
RLM1	YPL089C	GUP1	P53154	560 aa		2.76	□□□□□ -1.97
RLM1	YPL089C	YNL011C	P53980	444 aa		2.76	□□□□□ -1.97
RLM1	YPL089C	CTR9	P89105	1077 aa		2.76	□□□□□ -1.97
RLM1	YPL089C	TUB2	P02557	457 aa	Known RBP	2.75	□□□□□ -1.97
RLM1	YPL089C	FUS1	P11710	512 aa		2.75	□□□□□ -1.97
RLM1	YPL089C	GRS1	P38088	690 aa	Known RBP	2.75	□□□□□ -1.97
RLM1	YPL089C	HVG1	P0CE11	249 aa		2.75	□□□□□ -1.97
RLM1	YPL089C	PYC2	P32327	1180 aa	Known RBP	2.75	□□□□□ -1.97
RLM1	YPL089C	LEM3	P42838	414 aa		2.75	□□□□□ -1.97
RLM1	YPL089C	NOP8	Q08287	484 aa	Predicted RBP	2.75	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms