RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	COG6	P53959	839 aa		3.97	□□□□□ -1.77
TOP1	YOL006C	FAL1	Q12099	399 aa	Known RBP	3.97	□□□□□ -1.77
TOP1	YOL006C	APC11	Q12157	165 aa		3.97	□□□□□ -1.77
TOP1	YOL006C	PSH1	Q12161	406 aa		3.97	□□□□□ -1.77
TOP1	YOL006C	PUS1	Q12211	544 aa	Known RBP	3.97	□□□□□ -1.77
TOP1	YOL006C	PEX6	P33760	1030 aa		3.96	□□□□□ -1.77
TOP1	YOL006C	APL2	P36000	726 aa	Predicted RBP	3.96	□□□□□ -1.77
TOP1	YOL006C	SLI15	P38283	698 aa		3.96	□□□□□ -1.77
TOP1	YOL006C	NDE1	P40215	560 aa		3.96	□□□□□ -1.77
TOP1	YOL006C	PEX14	P53112	341 aa		3.96	□□□□□ -1.77
TOP1	YOL006C	TUB4	P53378	473 aa		3.96	□□□□□ -1.77
TOP1	YOL006C	YNL034W	P53963	612 aa		3.96	□□□□□ -1.77
TOP1	YOL006C	YNL018C	P53976	612 aa		3.96	□□□□□ -1.77
TOP1	YOL006C	IMH1	Q06704	911 aa	Known RBP	3.96	□□□□□ -1.77
TOP1	YOL006C	SPO75	Q07798	868 aa		3.96	□□□□□ -1.77
TOP1	YOL006C	HSP60	P19882	572 aa	Known RBP	3.96	□□□□□ -1.78
TOP1	YOL006C	UBP1	P25037	809 aa		3.96	□□□□□ -1.78
TOP1	YOL006C	DUT1	P33317	147 aa		3.96	□□□□□ -1.78
TOP1	YOL006C	PTH2	P34222	208 aa		3.96	□□□□□ -1.78
TOP1	YOL006C	EXO84	P38261	753 aa		3.96	□□□□□ -1.78
TOP1	YOL006C	HAL5	P38970	855 aa	Known RBP	3.96	□□□□□ -1.78
TOP1	YOL006C	MRPS18	P42847	217 aa		3.96	□□□□□ -1.78
TOP1	YOL006C	PIP2	P52960	996 aa		3.96	□□□□□ -1.78
TOP1	YOL006C	YNL011C	P53980	444 aa		3.96	□□□□□ -1.78
TOP1	YOL006C	UME1	Q03010	460 aa		3.96	□□□□□ -1.78
TOP1	YOL006C	VIP1	Q06685	1146 aa	Known RBP	3.96	□□□□□ -1.78
TOP1	YOL006C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
TOP1	YOL006C	AI4	P03878	556 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	PRE9	P23638	258 aa	Known RBP	3.95	□□□□□ -1.78
TOP1	YOL006C	ISC10	P32645	267 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	YBR071W	P38243	211 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	YBR184W	P38299	523 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	AIM9	P40053	627 aa	Known RBP	3.95	□□□□□ -1.78
TOP1	YOL006C	YFL034W	P43564	1073 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	TAF1	P46677	1066 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	STR2	P47164	639 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	TLG1	Q03322	224 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	UGO1	Q03327	502 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	YPR084W	Q06821	456 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	NOC3	Q07896	663 aa	Predicted RBP	3.95	□□□□□ -1.78
TOP1	YOL006C	THI73	Q07904	523 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	FAP7	Q12055	197 aa	Predicted RBP	3.95	□□□□□ -1.78
TOP1	YOL006C	MCD1	Q12158	566 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	GYP5	Q12344	894 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	TY1B-A	O13527	1196 aa	Known RBP	3.95	□□□□□ -1.78
TOP1	YOL006C	TRP5	P00931	707 aa	Known RBP	3.95	□□□□□ -1.78
TOP1	YOL006C	CDC31	P06704	161 aa	Known RBP	3.95	□□□□□ -1.78
TOP1	YOL006C	SPS1	P08458	490 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	RPL8B	P29453	256 aa	Known RBP	3.95	□□□□□ -1.78
TOP1	YOL006C	STE5	P32917	917 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	YBR197C	P38306	217 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	YJR115W	P47152	169 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	GPG1	P53130	126 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	MET14	Q02196	202 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	TSR2	Q06672	205 aa	Known RBP	3.95	□□□□□ -1.78
TOP1	YOL006C	SAM3	Q08986	587 aa		3.95	□□□□□ -1.78
TOP1	YOL006C	NPR1	P22211	790 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	PES4	P39684	611 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	ALA1	P40825	983 aa	Known RBP	3.94	□□□□□ -1.78
TOP1	YOL006C	YDL206W	Q12424	762 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	BAS1	P22035	811 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	KIP2	P28743	706 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	EUG1	P32474	517 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	RRN3	P36070	627 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	FIG4	P42837	879 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	UBA2	P52488	636 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	RSC1	P53236	928 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	SPC19	Q03954	165 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	CDC73	Q06697	393 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	YOL087C	Q99247	1116 aa		3.94	□□□□□ -1.78
TOP1	YOL006C	CYB2	P00175	591 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	BRF1	P29056	596 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	PLC1	P32383	869 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	SLX5	P32828	619 aa	Known RBP	3.93	□□□□□ -1.78
TOP1	YOL006C	NGR1	P32831	672 aa	Known RBP	3.93	□□□□□ -1.78
TOP1	YOL006C	APE4	P38821	490 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	TIF4632	P39936	914 aa	Known RBP	3.93	□□□□□ -1.78
TOP1	YOL006C	DOT6	P40059	670 aa	Known RBP	3.93	□□□□□ -1.78
TOP1	YOL006C	HOS2	P53096	452 aa	Predicted RBP	3.93	□□□□□ -1.78
TOP1	YOL006C	ERP6	P53198	216 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	YNL193W	P53870	558 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	YML131W	Q03102	365 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	PKH1	Q03407	766 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	YLR352W	Q06479	807 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	PSR2	Q07949	397 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	TRE2	Q08693	809 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	GAL1	P04385	528 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	HOM3	P10869	527 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	TFC4	P33339	1025 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	KTR2	P33550	425 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	NTH2	P35172	780 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	GEM1	P39722	662 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	MNT3	P40549	630 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	HUL4	P40985	892 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	SUT1	P53032	299 aa	Known RBP	3.93	□□□□□ -1.78
TOP1	YOL006C	RTA1	P53047	317 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	CTF4	Q01454	927 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	SRP1	Q02821	542 aa	Known RBP	3.93	□□□□□ -1.78
TOP1	YOL006C	CAB1	Q04430	367 aa		3.93	□□□□□ -1.78
TOP1	YOL006C	DAL4	Q04895	635 aa		3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms