RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C INP52P50942 1183 aa5.37□□□□□ -1.55
ATG3YNR007C SUT1P53032 299 aaKnown RBP5.37□□□□□ -1.55
ATG3YNR007C SOG2Q08817 791 aa5.37□□□□□ -1.55
ATG3YNR007C FUR4P05316 633 aaKnown RBP5.36□□□□□ -1.55
ATG3YNR007C KAE1P36132 386 aa5.36□□□□□ -1.55
ATG3YNR007C TAF7Q05021 590 aa5.36□□□□□ -1.55
ATG3YNR007C FUS1P11710 512 aa5.35□□□□□ -1.55
ATG3YNR007C PAN5P38787 379 aa5.35□□□□□ -1.55
ATG3YNR007C ALD3P54114 506 aa5.35□□□□□ -1.55
ATG3YNR007C SUB2Q07478 446 aaKnown RBP5.35□□□□□ -1.55
ATG3YNR007C RLF2Q12495 606 aa5.35□□□□□ -1.55
ATG3YNR007C GLT1Q12680 2145 aaKnown RBP5.35□□□□□ -1.55
ATG3YNR007C SMC1P32908 1225 aa5.34□□□□□ -1.55
ATG3YNR007C TFA2P36145 328 aa5.34□□□□□ -1.55
ATG3YNR007C SAF1P38352 637 aa5.34□□□□□ -1.55
ATG3YNR007C RAD55P38953 406 aa5.34□□□□□ -1.55
ATG3YNR007C YLR122CQ12312 125 aa5.34□□□□□ -1.55
ATG3YNR007C TCB3Q03640 1545 aaKnown RBP5.33□□□□□ -1.56
ATG3YNR007C RPB10P22139 70 aa5.33□□□□□ -1.56
ATG3YNR007C IRS4P36115 615 aaKnown RBP5.33□□□□□ -1.56
ATG3YNR007C MED7Q08278 222 aa5.33□□□□□ -1.56
ATG3YNR007C TIF6Q12522 245 aaKnown RBP5.33□□□□□ -1.56
ATG3YNR007C CHS2P14180 963 aa5.32□□□□□ -1.56
ATG3YNR007C POL5P39985 1022 aaKnown RBP5.32□□□□□ -1.56
ATG3YNR007C PSY2P40164 858 aa5.32□□□□□ -1.56
ATG3YNR007C SPO71Q03868 1245 aa5.32□□□□□ -1.56
ATG3YNR007C REC8Q12188 680 aa5.32□□□□□ -1.56
ATG3YNR007C TRP3P00937 484 aa5.31□□□□□ -1.56
ATG3YNR007C MAE1P36013 669 aaKnown RBP5.31□□□□□ -1.56
ATG3YNR007C BOL3P39724 118 aa5.31□□□□□ -1.56
ATG3YNR007C NAM7P30771 971 aaKnown RBP5.3□□□□□ -1.56
ATG3YNR007C YKR073CP36153 106 aa5.3□□□□□ -1.56
ATG3YNR007C AKR1P39010 764 aa5.3□□□□□ -1.56
ATG3YNR007C YJR124CP47159 448 aa5.3□□□□□ -1.56
ATG3YNR007C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
ATG3YNR007C HVG1P0CE11 249 aa5.29□□□□□ -1.56
ATG3YNR007C NEO1P40527 1151 aa5.29□□□□□ -1.56
ATG3YNR007C NCE103P53615 221 aa5.29□□□□□ -1.56
ATG3YNR007C YNR065CP53751 1116 aa5.29□□□□□ -1.56
ATG3YNR007C ELG1Q12050 791 aa5.29□□□□□ -1.56
ATG3YNR007C YGR130CP53278 816 aa5.28□□□□□ -1.56
ATG3YNR007C GLO4Q12320 285 aa5.28□□□□□ -1.56
ATG3YNR007C REV3P14284 1504 aa5.28□□□□□ -1.56
ATG3YNR007C PYC2P32327 1180 aaKnown RBP5.27□□□□□ -1.57
ATG3YNR007C TOS1P38288 455 aa5.27□□□□□ -1.57
ATG3YNR007C RPL34AP87262 121 aaPredicted RBP5.27□□□□□ -1.57
ATG3YNR007C HAS1Q03532 505 aaKnown RBP5.27□□□□□ -1.57
ATG3YNR007C PUB1P32588 453 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57 RIP-Chip
ATG3YNR007C FET4P40988 552 aa5.26□□□□□ -1.57
ATG3YNR007C SPO74P45819 413 aa5.26□□□□□ -1.57
ATG3YNR007C LIP5P32875 414 aa5.25□□□□□ -1.57
ATG3YNR007C GLO3P38682 493 aaKnown RBP5.25□□□□□ -1.57
ATG3YNR007C FAR11P53917 953 aa5.25□□□□□ -1.57
ATG3YNR007C UFD2P54860 961 aa5.25□□□□□ -1.57
ATG3YNR007C KAR5Q04746 504 aa5.25□□□□□ -1.57
ATG3YNR007C TY1B-DR4Q07793 1604 aa5.25□□□□□ -1.57
ATG3YNR007C CYC7P00045 113 aa5.24□□□□□ -1.57
ATG3YNR007C ERS1P17261 260 aa5.24□□□□□ -1.57
ATG3YNR007C MSB1P21339 1137 aaKnown RBP5.24□□□□□ -1.57
ATG3YNR007C BRE4Q07660 1125 aa5.24□□□□□ -1.57
ATG3YNR007C QDR1P40475 563 aa5.23□□□□□ -1.57
ATG3YNR007C IRC24P40580 263 aa5.23□□□□□ -1.57
ATG3YNR007C CTH1P47976 325 aa5.23□□□□□ -1.57
ATG3YNR007C KIP3P53086 805 aaKnown RBP5.23□□□□□ -1.57
ATG3YNR007C CTR9P89105 1077 aa5.23□□□□□ -1.57
ATG3YNR007C RSC4Q02206 625 aa5.23□□□□□ -1.57
ATG3YNR007C SGS1P35187 1447 aa5.23□□□□□ -1.57
ATG3YNR007C ATG1P53104 897 aa5.22□□□□□ -1.57
ATG3YNR007C MAG2Q06436 670 aaKnown RBP5.22□□□□□ -1.57
ATG3YNR007C GIC2Q06648 383 aa5.22□□□□□ -1.57
ATG3YNR007C AVT1P47082 602 aa5.21□□□□□ -1.58
ATG3YNR007C ACF4P47129 309 aa5.21□□□□□ -1.58
ATG3YNR007C ECM5Q03214 1411 aa5.21□□□□□ -1.58
ATG3YNR007C ECM2P38241 364 aaKnown RBP5.2□□□□□ -1.58
ATG3YNR007C YMR074CQ04773 145 aa5.2□□□□□ -1.58
ATG3YNR007C YOR223WQ12015 292 aa5.2□□□□□ -1.58
ATG3YNR007C YLL054CQ12244 843 aa5.2□□□□□ -1.58
ATG3YNR007C RIM11P38615 370 aa5.19□□□□□ -1.58
ATG3YNR007C COBP00163 385 aa5.18□□□□□ -1.58
ATG3YNR007C NPR1P22211 790 aa5.18□□□□□ -1.58
ATG3YNR007C GCV1P48015 400 aa5.18□□□□□ -1.58
ATG3YNR007C YNL011CP53980 444 aa5.18□□□□□ -1.58
ATG3YNR007C TRS120Q04183 1289 aa5.18□□□□□ -1.58
ATG3YNR007C YIG1Q08956 461 aa5.18□□□□□ -1.58
ATG3YNR007C BNI1P41832 1953 aa5.17□□□□□ -1.58
ATG3YNR007C SSA1P10591 642 aaKnown RBP5.17□□□□□ -1.58
ATG3YNR007C PRP5P21372 849 aaPredicted RBP5.17□□□□□ -1.58
ATG3YNR007C CMR1Q12510 522 aaKnown RBP5.17□□□□□ -1.58
ATG3YNR007C HTS1P07263 546 aaKnown RBP5.16□□□□□ -1.58
ATG3YNR007C MMM1P41800 426 aa5.16□□□□□ -1.58
ATG3YNR007C MSH6Q03834 1242 aa5.16□□□□□ -1.58
ATG3YNR007C DUR3P33413 735 aa5.15□□□□□ -1.59
ATG3YNR007C GPT2P36148 743 aa5.15□□□□□ -1.59
ATG3YNR007C CDC55Q00362 526 aa5.15□□□□□ -1.59
ATG3YNR007C DOT1Q04089 582 aaKnown RBP5.15□□□□□ -1.59
ATG3YNR007C BSC2Q05611 235 aa5.15□□□□□ -1.59
ATG3YNR007C AOS1Q06624 347 aa5.15□□□□□ -1.59
ATG3YNR007C MNL2Q12205 849 aa5.15□□□□□ -1.59
ATG3YNR007C TRL1P09880 827 aaKnown RBP5.14□□□□□ -1.59
ATG3YNR007C ELM1P32801 640 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms